RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 HAUS3Q68CZ6 603 aa18.09■□□□□ 0.49
COL1A1-202ENST00000463440 CATSPER4Q7RTX7 472 aa18.09■□□□□ 0.49
COL1A1-202ENST00000463440 CATSPER3Q86XQ3 398 aa18.09■□□□□ 0.49
COL1A1-202ENST00000463440 C4orf32Q8N8J7 132 aa18.09■□□□□ 0.49
COL1A1-202ENST00000463440 PIGOQ8TEQ8 1089 aa18.09■□□□□ 0.49
COL1A1-202ENST00000463440 MRPL38Q96DV4 380 aaKnown RBP18.09■□□□□ 0.49
COL1A1-202ENST00000463440 PLVAPQ9BX97 442 aa18.09■□□□□ 0.49
COL1A1-202ENST00000463440 RAB34Q9BZG1 259 aa18.09■□□□□ 0.49
COL1A1-202ENST00000463440 PCDHB6Q9Y5E3 794 aa18.09■□□□□ 0.49
COL1A1-202ENST00000463440 ARID2Q68CP9 1835 aa18.09■□□□□ 0.49
COL1A1-202ENST00000463440 PRUNE2Q8WUY3 3088 aa18.08■□□□□ 0.49
COL1A1-202ENST00000463440 TBKBP1A7MCY6 615 aa18.08■□□□□ 0.48
COL1A1-202ENST00000463440 LAD1O00515 517 aa18.08■□□□□ 0.48
COL1A1-202ENST00000463440 MED24O75448 989 aa18.08■□□□□ 0.48
COL1A1-202ENST00000463440 RPA1P27694 616 aa18.08■□□□□ 0.48
COL1A1-202ENST00000463440 GATMP50440 423 aa18.08■□□□□ 0.48
COL1A1-202ENST00000463440 FXR2P51116 673 aaKnown RBP eCLIP18.08■□□□□ 0.48
COL1A1-202ENST00000463440 MXD4Q14582 209 aaPredicted RBP18.08■□□□□ 0.48
COL1A1-202ENST00000463440 FAM102BQ5T8I3 360 aa18.08■□□□□ 0.48
COL1A1-202ENST00000463440 SRGAP1Q7Z6B7 1085 aa18.08■□□□□ 0.48
COL1A1-202ENST00000463440 FERMT3Q86UX7 667 aa18.08■□□□□ 0.48
COL1A1-202ENST00000463440 ECHDC2Q86YB7 292 aa18.08■□□□□ 0.48
COL1A1-202ENST00000463440 ATXN2LQ8WWM7 1075 aaKnown RBP18.08■□□□□ 0.48
COL1A1-202ENST00000463440 NACC1Q96RE7 527 aa18.08■□□□□ 0.48
COL1A1-202ENST00000463440 IFT122Q9HBG6 1241 aa18.08■□□□□ 0.48
COL1A1-202ENST00000463440 XPNPEP1Q9NQW7 623 aa18.08■□□□□ 0.48
COL1A1-202ENST00000463440 LRWD1Q9UFC0 647 aa18.08■□□□□ 0.48
COL1A1-202ENST00000463440 STK24Q9Y6E0 443 aa18.08■□□□□ 0.48
COL1A1-202ENST00000463440 A0A0U1RQF3 1178 aa18.07■□□□□ 0.48
COL1A1-202ENST00000463440 MUTP22033 750 aa18.07■□□□□ 0.48
COL1A1-202ENST00000463440 CUL4AQ13619 759 aa18.07■□□□□ 0.48
COL1A1-202ENST00000463440 TFDP1Q14186 410 aa18.07■□□□□ 0.48
COL1A1-202ENST00000463440 PDIA5Q14554 519 aa18.07■□□□□ 0.48
COL1A1-202ENST00000463440 NAALADL2Q58DX5 795 aa18.07■□□□□ 0.48
COL1A1-202ENST00000463440 SPOUT1Q5T280 376 aaKnown RBP18.07■□□□□ 0.48
COL1A1-202ENST00000463440 ABI1Q8IZP0 508 aa18.07■□□□□ 0.48
COL1A1-202ENST00000463440 RNF149Q8NC42 400 aa18.07■□□□□ 0.48
COL1A1-202ENST00000463440 LMAN2LQ9H0V9 348 aa18.07■□□□□ 0.48
COL1A1-202ENST00000463440 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.07■□□□□ 0.48
COL1A1-202ENST00000463440 DBR1Q9UK59 544 aaKnown RBP18.07■□□□□ 0.48
COL1A1-202ENST00000463440 PIN4Q9Y237 131 aaKnown RBP18.07■□□□□ 0.48
COL1A1-202ENST00000463440 A0A087WWV3 80 aa18.06■□□□□ 0.48
COL1A1-202ENST00000463440 USO1O60763 962 aaKnown RBP18.06■□□□□ 0.48
COL1A1-202ENST00000463440 EOMESO95936 686 aa18.06■□□□□ 0.48
COL1A1-202ENST00000463440 FGFR1P11362 822 aa18.06■□□□□ 0.48
COL1A1-202ENST00000463440 SKIP12755 728 aa18.06■□□□□ 0.48
COL1A1-202ENST00000463440 CCT6AP40227 531 aaKnown RBP18.06■□□□□ 0.48
COL1A1-202ENST00000463440 PRPHP41219 470 aa18.06■□□□□ 0.48
COL1A1-202ENST00000463440 PHKA2P46019 1235 aa18.06■□□□□ 0.48
COL1A1-202ENST00000463440 MRPS5P82675 430 aaKnown RBP18.06■□□□□ 0.48
COL1A1-202ENST00000463440 TIGD5Q53EQ6 642 aa18.06■□□□□ 0.48
COL1A1-202ENST00000463440 TWF2Q6IBS0 349 aaKnown RBP18.06■□□□□ 0.48
COL1A1-202ENST00000463440 RNF169Q8NCN4 708 aa18.06■□□□□ 0.48
COL1A1-202ENST00000463440 P2RX5Q93086 422 aa18.06■□□□□ 0.48
COL1A1-202ENST00000463440 TMEM117Q9H0C3 514 aa18.06■□□□□ 0.48
COL1A1-202ENST00000463440 AAASQ9NRG9 546 aa18.06■□□□□ 0.48
COL1A1-202ENST00000463440 COG5Q9UP83 839 aa18.06■□□□□ 0.48
COL1A1-202ENST00000463440 DLL1O00548 723 aa18.05■□□□□ 0.48
COL1A1-202ENST00000463440 POU5F1BQ06416 359 aa18.05■□□□□ 0.48
COL1A1-202ENST00000463440 AAK1Q2M2I8 961 aa18.05■□□□□ 0.48
COL1A1-202ENST00000463440 TJAP1Q5JTD0 557 aa18.05■□□□□ 0.48
COL1A1-202ENST00000463440 POTEGQ6S5H5 508 aa18.05■□□□□ 0.48
COL1A1-202ENST00000463440 DTHD1Q6ZMT9 781 aa18.05■□□□□ 0.48
COL1A1-202ENST00000463440 IGSF22Q8N9C0 903 aa18.05■□□□□ 0.48
COL1A1-202ENST00000463440 MCPH1Q8NEM0 835 aa18.05■□□□□ 0.48
COL1A1-202ENST00000463440 TRAIPQ9BWF2 469 aa18.05■□□□□ 0.48
COL1A1-202ENST00000463440 AGPAT5Q9NUQ2 364 aa18.05■□□□□ 0.48
COL1A1-202ENST00000463440 PCDHB12Q9Y5F1 795 aa18.05■□□□□ 0.48
COL1A1-202ENST00000463440 FNDC1Q4ZHG4 1894 aaPredicted RBP18.05■□□□□ 0.48
COL1A1-202ENST00000463440 ARHGEF35A5YM69 484 aa18.04■□□□□ 0.48
COL1A1-202ENST00000463440 GRM6O15303 877 aa18.04■□□□□ 0.48
COL1A1-202ENST00000463440 PDCP20941 246 aa18.04■□□□□ 0.48
COL1A1-202ENST00000463440 ARL2P36404 184 aa18.04■□□□□ 0.48
COL1A1-202ENST00000463440 RAB27AP51159 221 aa18.04■□□□□ 0.48
COL1A1-202ENST00000463440 PCBP1Q15365 356 aaKnown RBP eCLIP18.04■□□□□ 0.48
COL1A1-202ENST00000463440 ZNF598Q86UK7 904 aaKnown RBP18.04■□□□□ 0.48
COL1A1-202ENST00000463440 SNX29Q8TEQ0 813 aa18.04■□□□□ 0.48
COL1A1-202ENST00000463440 SYMPKQ92797 1274 aaKnown RBP18.04■□□□□ 0.48
COL1A1-202ENST00000463440 HLA-CQ95604 372 aa18.04■□□□□ 0.48
COL1A1-202ENST00000463440 ASB2Q96Q27 587 aa18.04■□□□□ 0.48
COL1A1-202ENST00000463440 POLR3FQ9H1D9 316 aaPredicted RBP18.04■□□□□ 0.48
COL1A1-202ENST00000463440 MINDY3Q9H8M7 445 aa18.04■□□□□ 0.48
COL1A1-202ENST00000463440 TYW1Q9NV66 732 aaKnown RBP18.04■□□□□ 0.48
COL1A1-202ENST00000463440 PLAGL2Q9UPG8 496 aa18.04■□□□□ 0.48
COL1A1-202ENST00000463440 UNC80Q8N2C7 3258 aa18.04■□□□□ 0.48
COL1A1-202ENST00000463440 ERLIN2O94905 339 aa18.03■□□□□ 0.48
COL1A1-202ENST00000463440 PTENP60484 403 aa18.03■□□□□ 0.48
COL1A1-202ENST00000463440 ATP2C1P98194 919 aaPredicted RBP18.03■□□□□ 0.48
COL1A1-202ENST00000463440 NCBP1Q09161 790 aaKnown RBP18.03■□□□□ 0.48
COL1A1-202ENST00000463440 CAPSQ13938 189 aa18.03■□□□□ 0.48
COL1A1-202ENST00000463440 CSPP1Q1MSJ5 1256 aa18.03■□□□□ 0.48
COL1A1-202ENST00000463440 KRT79Q5XKE5 535 aa18.03■□□□□ 0.48
COL1A1-202ENST00000463440 IFNLR1Q8IU57 520 aaPredicted RBP18.03■□□□□ 0.48
COL1A1-202ENST00000463440 LRRC43Q8N309 656 aa18.03■□□□□ 0.48
COL1A1-202ENST00000463440 KLHL23Q8NBE8 558 aa18.03■□□□□ 0.48
COL1A1-202ENST00000463440 ASAP3Q8TDY4 903 aa18.03■□□□□ 0.48
COL1A1-202ENST00000463440 RSPH1Q8WYR4 309 aa18.03■□□□□ 0.48
COL1A1-202ENST00000463440 CASD1Q96PB1 797 aa18.03■□□□□ 0.48
COL1A1-202ENST00000463440 NSUN3Q9H649 340 aaKnown RBP18.03■□□□□ 0.48
COL1A1-202ENST00000463440 ALG13Q9NP73 1137 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms