RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 IQCEQ6IPM2 695 aa14□□□□□ -0.17
VAPB-203ENST00000463370 FBXO38Q6PIJ6 1188 aa14□□□□□ -0.17
VAPB-203ENST00000463370 OTUD6AQ7L8S5 288 aa14□□□□□ -0.17
VAPB-203ENST00000463370 IRF2BP2Q7Z5L9 587 aa14□□□□□ -0.17
VAPB-203ENST00000463370 GOLGA5Q8TBA6 731 aa14□□□□□ -0.17
VAPB-203ENST00000463370 PLEKHO2Q8TD55 490 aa14□□□□□ -0.17
VAPB-203ENST00000463370 TIPINQ9BVW5 301 aa14□□□□□ -0.17
VAPB-203ENST00000463370 ST6GALNAC4Q9H4F1 302 aa14□□□□□ -0.17
VAPB-203ENST00000463370 TMEM206Q9H813 350 aa14□□□□□ -0.17
VAPB-203ENST00000463370 PUF60Q9UHX1 559 aaKnown RBP14□□□□□ -0.17
VAPB-203ENST00000463370 CAPN6Q9Y6Q1 641 aa14□□□□□ -0.17
VAPB-203ENST00000463370 IGSF9BQ9UPX0 1349 aa14□□□□□ -0.17
VAPB-203ENST00000463370 DOCK5Q9H7D0 1870 aa14□□□□□ -0.17
VAPB-203ENST00000463370 GOLGA8IPA6NC78 632 aa14□□□□□ -0.17
VAPB-203ENST00000463370 GOLGA8JA6NMD2 632 aa14□□□□□ -0.17
VAPB-203ENST00000463370 KIF5AQ12840 1032 aa14□□□□□ -0.17
VAPB-203ENST00000463370 BFSP1Q12934 665 aa14□□□□□ -0.17
VAPB-203ENST00000463370 MTERF2Q49AM1 385 aa14□□□□□ -0.17
VAPB-203ENST00000463370 MIS18BP1Q6P0N0 1132 aa14□□□□□ -0.17
VAPB-203ENST00000463370 DNAAF5Q86Y56 855 aa14□□□□□ -0.17
VAPB-203ENST00000463370 NUCKS1Q9H1E3 243 aaKnown RBP14□□□□□ -0.17
VAPB-203ENST00000463370 HSPBP1Q9NZL4 362 aa14□□□□□ -0.17
VAPB-203ENST00000463370 TBX20Q9UMR3 447 aa14□□□□□ -0.17
VAPB-203ENST00000463370 A0A087X0T9 212 aa13.99□□□□□ -0.17
VAPB-203ENST00000463370 DENND3A2RUS2 1198 aa13.99□□□□□ -0.17
VAPB-203ENST00000463370 EFCAB8A8MWE9 144 aa13.99□□□□□ -0.17
VAPB-203ENST00000463370 SRGAP2O75044 1071 aa13.99□□□□□ -0.17
VAPB-203ENST00000463370 ATG7O95352 703 aa13.99□□□□□ -0.17
VAPB-203ENST00000463370 FAM228BP0C875 321 aa13.99□□□□□ -0.17
VAPB-203ENST00000463370 CYP2C8P10632 490 aa13.99□□□□□ -0.17
VAPB-203ENST00000463370 MAGEA1P43355 309 aa13.99□□□□□ -0.17
VAPB-203ENST00000463370 JAM2P57087 298 aa13.99□□□□□ -0.17
VAPB-203ENST00000463370 PTK2Q05397 1052 aa13.99□□□□□ -0.17
VAPB-203ENST00000463370 KLHL30Q0D2K2 578 aa13.99□□□□□ -0.17
VAPB-203ENST00000463370 DMP1Q13316 513 aaPredicted RBP13.99□□□□□ -0.17
VAPB-203ENST00000463370 ASIC2Q16515 512 aa13.99□□□□□ -0.17
VAPB-203ENST00000463370 GPR162Q16538 588 aa13.99□□□□□ -0.17
VAPB-203ENST00000463370 LY6KQ17RY6 165 aa13.99□□□□□ -0.17
VAPB-203ENST00000463370 C1orf220Q5T0J3 134 aa13.99□□□□□ -0.17
VAPB-203ENST00000463370 PCYT2Q99447 389 aa13.99□□□□□ -0.17
VAPB-203ENST00000463370 MAF1Q9H063 256 aa13.99□□□□□ -0.17
VAPB-203ENST00000463370 ZNF408Q9H9D4 720 aa13.99□□□□□ -0.17
VAPB-203ENST00000463370 ADAMTS1Q9UHI8 967 aa13.99□□□□□ -0.17
VAPB-203ENST00000463370 GTPBP10A4D1E9 387 aaKnown RBP13.98□□□□□ -0.17
VAPB-203ENST00000463370 RBAK-RBAKDNI3L0D1 243 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 SOCS7O14512 581 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 FARP2O94887 1054 aaPredicted RBP13.98□□□□□ -0.17
VAPB-203ENST00000463370 ARIH2O95376 493 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 MOCS3O95396 460 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 PPP3CAQ08209 521 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 ALCAMQ13740 583 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 LDLRAD1Q5T700 205 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 MAP1SQ66K74 1059 aaPredicted RBP13.98□□□□□ -0.17
VAPB-203ENST00000463370 SLC39A4Q6P5W5 647 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 ZNF571Q7Z3V5 609 aaPredicted RBP13.98□□□□□ -0.17
VAPB-203ENST00000463370 UBXN4Q92575 508 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 SPAG5Q96R06 1193 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 PACSIN1Q9BY11 444 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 KMT5AQ9NQR1 393 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 USP20Q9Y2K6 914 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 MAFBQ9Y5Q3 323 aaPredicted RBP13.98□□□□□ -0.17
VAPB-203ENST00000463370 KIAA1217Q5T5P2 1943 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 GSTTP1A0A1W2PQM5 241 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 ADRB2P07550 413 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 HSP90AA2PQ14568 343 aaPredicted RBP13.98□□□□□ -0.17
VAPB-203ENST00000463370 PPP2R5AQ15172 486 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 TMEM63BQ5T3F8 832 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 RSRC2Q7L4I2 434 aaKnown RBP13.98□□□□□ -0.17
VAPB-203ENST00000463370 TAS1R3Q7RTX0 852 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 MAP4K3Q8IVH8 894 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 C12orf56Q8IXR9 622 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 SECISBP2LQ93073 1101 aaKnown RBP13.98□□□□□ -0.17
VAPB-203ENST00000463370 SAAL1Q96ER3 474 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.98□□□□□ -0.17
VAPB-203ENST00000463370 ZNF302Q9NR11 478 aa13.98□□□□□ -0.17
VAPB-203ENST00000463370 DGAT1O75907 488 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 ZSCAN20P17040 1043 aaPredicted RBP13.97□□□□□ -0.17
VAPB-203ENST00000463370 MKRN3Q13064 507 aaKnown RBP13.97□□□□□ -0.17
VAPB-203ENST00000463370 MYBPC2Q14324 1141 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 XKR3Q5GH77 459 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 TEX35Q5T0J7 233 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 TRAPPC11Q7Z392 1133 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 ARMC9Q7Z3E5 817 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 CBWD2Q8IUF1 395 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 XXYLT1Q8NBI6 393 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 LMO3Q8TAP4 145 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 KIFAP3Q92845 792 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 TMEM143Q96AN5 459 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 NTPCRQ9BSD7 190 aaKnown RBP13.97□□□□□ -0.17
VAPB-203ENST00000463370 MYO6Q9UM54 1294 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 CNGA1P29973 690 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 GCLMP48507 274 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 SMTNP53814 917 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 MYL7Q01449 175 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 SLC18A3Q16572 532 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 WDR78Q5VTH9 848 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 TMEM174Q8WUU8 243 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 GPR88Q9GZN0 384 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 INTS2Q9H0H0 1204 aaKnown RBP13.97□□□□□ -0.17
VAPB-203ENST00000463370 POLR3FQ9H1D9 316 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms