RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 SRGAP2CP0DJJ0 459 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 ACRP10323 421 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 EPHB4P54760 987 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 GIT2Q14161 759 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 TFDP1Q14186 410 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 LONRF3Q496Y0 759 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 TSHZ1Q6ZSZ6 1077 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 C16orf59Q7L2K0 433 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 CEP57L1Q8IYX8 460 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 RPUSD2Q8IZ73 545 aaKnown RBP13.06□□□□□ -0.32
CPNE1-221ENST00000462352 USP38Q8NB14 1042 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 RNF149Q8NC42 400 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 BSNDQ8WZ55 320 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 STAMQ92783 540 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 DRC1Q96MC2 740 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 GBP4Q96PP9 640 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 GDF15Q99988 308 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 GCOM2Q9BZD3 368 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-221ENST00000462352 MAGEF1Q9HAY2 307 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 IFT122Q9HBG6 1241 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 KBTBD4Q9NVX7 518 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 ODF2LQ9ULJ1 636 aa13.06□□□□□ -0.32
CPNE1-221ENST00000462352 NOC2LQ9Y3T9 749 aaKnown RBP13.06□□□□□ -0.32
CPNE1-221ENST00000462352 SFI1A8K8P3 1242 aa13.05□□□□□ -0.32
CPNE1-221ENST00000462352 ACTN4O43707 911 aaKnown RBP13.05□□□□□ -0.32
CPNE1-221ENST00000462352 RPS6KA5O75582 802 aa13.05□□□□□ -0.32
CPNE1-221ENST00000462352 PFKMP08237 780 aa13.05□□□□□ -0.32
CPNE1-221ENST00000462352 SLFN14P0C7P3 912 aa13.05□□□□□ -0.32
CPNE1-221ENST00000462352 DARSP14868 501 aaKnown RBP13.05□□□□□ -0.32
CPNE1-221ENST00000462352 EIF4BP23588 611 aaKnown RBP13.05□□□□□ -0.32
CPNE1-221ENST00000462352 CD52P31358 61 aa13.05□□□□□ -0.32
CPNE1-221ENST00000462352 NAMPTP43490 491 aa13.05□□□□□ -0.32
CPNE1-221ENST00000462352 POU5F1BQ06416 359 aa13.05□□□□□ -0.32
CPNE1-221ENST00000462352 PLEKHG4Q58EX7 1191 aa13.05□□□□□ -0.32
CPNE1-221ENST00000462352 DYMQ7RTS9 669 aa13.05□□□□□ -0.32
CPNE1-221ENST00000462352 ENGASEQ8NFI3 743 aa13.05□□□□□ -0.32
CPNE1-221ENST00000462352 DBF4BQ8NFT6 615 aa13.05□□□□□ -0.32
CPNE1-221ENST00000462352 DDX12PQ92771 950 aa13.05□□□□□ -0.32
CPNE1-221ENST00000462352 IFT74Q96LB3 600 aa13.05□□□□□ -0.32
CPNE1-221ENST00000462352 IFIH1Q9BYX4 1025 aaKnown RBP13.05□□□□□ -0.32
CPNE1-221ENST00000462352 LRRC27Q9C0I9 530 aa13.05□□□□□ -0.32
CPNE1-221ENST00000462352 AGO3Q9H9G7 860 aaKnown RBP13.05□□□□□ -0.32
CPNE1-221ENST00000462352 USP25Q9UHP3 1055 aa13.05□□□□□ -0.32
CPNE1-221ENST00000462352 PADI3Q9ULW8 664 aa13.05□□□□□ -0.32
CPNE1-221ENST00000462352 LRRIQ4A6NIV6 560 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 TBCAO75347 108 aaKnown RBP13.04□□□□□ -0.32
CPNE1-221ENST00000462352 CSDE1O75534 798 aaKnown RBP13.04□□□□□ -0.32
CPNE1-221ENST00000462352 FAM13AO94988 1023 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 ZNF202O95125 648 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 PLS3P13797 630 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 AFMP43652 599 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 PHKA2P46019 1235 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 ZNF131P52739 623 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 PTENP60484 403 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 UBE2HP62256 183 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 AMPD3Q01432 767 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 FAM160A1Q05DH4 1040 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 PAK2Q13177 524 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 SNW1Q13573 536 aaKnown RBP13.04□□□□□ -0.32
CPNE1-221ENST00000462352 PPP2R5AQ15172 486 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 TCTN1Q2MV58 587 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 TMEM240Q5SV17 173 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 CNKSR3Q6P9H4 555 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 PSRC1Q6PGN9 363 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-221ENST00000462352 ZNF365Q70YC5 407 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 SRGAP1Q7Z6B7 1085 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 FAM228AQ86W67 206 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 IFNLR1Q8IU57 520 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-221ENST00000462352 FMR1NBQ8N0W7 255 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-221ENST00000462352 SEPT8Q92599 483 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 DNAJC19Q96DA6 116 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.04□□□□□ -0.322e-6■□□□□ 9.9
CPNE1-221ENST00000462352 NFKBIZQ9BYH8 718 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 TRIM9Q9C026 710 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 INO80BQ9C086 356 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-221ENST00000462352 UBE2OQ9C0C9 1292 aaKnown RBP13.04□□□□□ -0.32
CPNE1-221ENST00000462352 MINDY3Q9H8M7 445 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 C17orf75Q9HAS0 396 aa13.04□□□□□ -0.32
CPNE1-221ENST00000462352 TET1Q8NFU7 2136 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-221ENST00000462352 CCDC169A6NNP5 214 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 GPR182O15218 404 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 FGBP02675 491 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 LIG1P18858 919 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 FGFR4P22455 802 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 SFPQP23246 707 aaKnown RBP eCLIP13.03□□□□□ -0.32
CPNE1-221ENST00000462352 NPTX2P47972 431 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 PEX3P56589 373 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 NFX1Q12986 1120 aaKnown RBP13.03□□□□□ -0.32
CPNE1-221ENST00000462352 DMP1Q13316 513 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-221ENST00000462352 ODR4Q5SWX8 454 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 CDCA2Q69YH5 1023 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-221ENST00000462352 KRBA2Q6ZNG9 492 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 GRAMD1CQ8IYS0 662 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 CNNM3Q8NE01 707 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 DEPTORQ8TB45 409 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 APBB2Q92870 758 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 PAGE5Q96GU1 130 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 C7orf25Q9BPX7 421 aa13.03□□□□□ -0.32
CPNE1-221ENST00000462352 KIFC3Q9BVG8 833 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms