RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 CDH23Q9H251 3354 aa17.61■□□□□ 0.41
ERCC3-206ENST00000462306 DGKIO75912 1065 aa17.61■□□□□ 0.41
ERCC3-206ENST00000462306 EYA4O95677 639 aa17.61■□□□□ 0.41
ERCC3-206ENST00000462306 ZSCAN22P10073 491 aaPredicted RBP17.61■□□□□ 0.41
ERCC3-206ENST00000462306 SFPQP23246 707 aaKnown RBP eCLIP17.61■□□□□ 0.41
ERCC3-206ENST00000462306 LONP1P36776 959 aaKnown RBP17.61■□□□□ 0.41
ERCC3-206ENST00000462306 SARSP49591 514 aaKnown RBP17.61■□□□□ 0.41
ERCC3-206ENST00000462306 FAM189BP81408 668 aa17.61■□□□□ 0.41
ERCC3-206ENST00000462306 POU5F1BQ06416 359 aa17.61■□□□□ 0.41
ERCC3-206ENST00000462306 GRB10Q13322 594 aa17.61■□□□□ 0.41
ERCC3-206ENST00000462306 PKP1Q13835 747 aa17.61■□□□□ 0.41
ERCC3-206ENST00000462306 CAPSQ13938 189 aa17.61■□□□□ 0.41
ERCC3-206ENST00000462306 SRGAP1Q7Z6B7 1085 aa17.61■□□□□ 0.41
ERCC3-206ENST00000462306 MCPH1Q8NEM0 835 aa17.61■□□□□ 0.41
ERCC3-206ENST00000462306 MYLIPQ8WY64 445 aa17.61■□□□□ 0.41
ERCC3-206ENST00000462306 ZNF689Q96CS4 500 aaPredicted RBP17.61■□□□□ 0.41
ERCC3-206ENST00000462306 YME1L1Q96TA2 773 aa17.61■□□□□ 0.41
ERCC3-206ENST00000462306 POLR3FQ9H1D9 316 aaPredicted RBP17.61■□□□□ 0.41
ERCC3-206ENST00000462306 PRDM12Q9H4Q4 367 aa17.61■□□□□ 0.41
ERCC3-206ENST00000462306 DNM3Q9UQ16 869 aa17.61■□□□□ 0.41
ERCC3-206ENST00000462306 COL4A6Q14031 1691 aa17.61■□□□□ 0.41
ERCC3-206ENST00000462306 MARCKSP29966 332 aaPredicted RBP17.6■□□□□ 0.41
ERCC3-206ENST00000462306 PTENP60484 403 aa17.6■□□□□ 0.41
ERCC3-206ENST00000462306 CEBPZQ03701 1054 aaKnown RBP17.6■□□□□ 0.41
ERCC3-206ENST00000462306 FOXD4L5Q5VV16 416 aaPredicted RBP17.6■□□□□ 0.41
ERCC3-206ENST00000462306 MAEAQ7L5Y9 396 aa17.6■□□□□ 0.41
ERCC3-206ENST00000462306 CABP7Q86V35 215 aa17.6■□□□□ 0.41
ERCC3-206ENST00000462306 IFNLR1Q8IU57 520 aaPredicted RBP17.6■□□□□ 0.41
ERCC3-206ENST00000462306 KCTD17Q8N5Z5 321 aa17.6■□□□□ 0.41
ERCC3-206ENST00000462306 FOXD4L4Q8WXT5 416 aaPredicted RBP17.6■□□□□ 0.41
ERCC3-206ENST00000462306 CERS4Q9HA82 394 aa17.6■□□□□ 0.41
ERCC3-206ENST00000462306 CHST12Q9NRB3 414 aa17.6■□□□□ 0.41
ERCC3-206ENST00000462306 FBXO2Q9UK22 296 aaPredicted RBP17.6■□□□□ 0.41
ERCC3-206ENST00000462306 STXBP5LQ9Y2K9 1186 aa17.6■□□□□ 0.41
ERCC3-206ENST00000462306 MORC2Q9Y6X9 1032 aaPredicted RBP17.6■□□□□ 0.41
ERCC3-206ENST00000462306 EPOPA6NHQ4 379 aa17.59■□□□□ 0.41
ERCC3-206ENST00000462306 SLC26A4O43511 780 aa17.59■□□□□ 0.41
ERCC3-206ENST00000462306 F13A1P00488 732 aa17.59■□□□□ 0.41
ERCC3-206ENST00000462306 STAG3L1P0CL83 205 aa17.59■□□□□ 0.41
ERCC3-206ENST00000462306 ZSCAN20P17040 1043 aaPredicted RBP17.59■□□□□ 0.41
ERCC3-206ENST00000462306 PHKA2P46019 1235 aa17.59■□□□□ 0.41
ERCC3-206ENST00000462306 NASPP49321 788 aaPredicted RBP17.59■□□□□ 0.41
ERCC3-206ENST00000462306 ERVK-21P61565 698 aa17.59■□□□□ 0.41
ERCC3-206ENST00000462306 TFDP1Q14186 410 aa17.59■□□□□ 0.41
ERCC3-206ENST00000462306 SLC39A14Q15043 492 aa17.59■□□□□ 0.41
ERCC3-206ENST00000462306 ZRSR1Q15695 479 aaKnown RBP17.59■□□□□ 0.41
ERCC3-206ENST00000462306 TMEM119Q4V9L6 283 aa17.59■□□□□ 0.41
ERCC3-206ENST00000462306 FAM102BQ5T8I3 360 aa17.59■□□□□ 0.41
ERCC3-206ENST00000462306 CATSPER4Q7RTX7 472 aa17.59■□□□□ 0.41
ERCC3-206ENST00000462306 PLIN2Q99541 437 aa17.59■□□□□ 0.41
ERCC3-206ENST00000462306 NFKBIZQ9BYH8 718 aa17.59■□□□□ 0.41
ERCC3-206ENST00000462306 NT5C3AQ9H0P0 336 aa17.59■□□□□ 0.41
ERCC3-206ENST00000462306 SRPRBQ9Y5M8 271 aaKnown RBP17.59■□□□□ 0.41
ERCC3-206ENST00000462306 CHD7Q9P2D1 2997 aa17.59■□□□□ 0.41
ERCC3-206ENST00000462306 ADGRA3Q8IWK6 1321 aa17.58■□□□□ 0.4
ERCC3-206ENST00000462306 UBA7P41226 1012 aa17.58■□□□□ 0.4
ERCC3-206ENST00000462306 LRRC15Q8TF66 581 aa17.58■□□□□ 0.4
ERCC3-206ENST00000462306 ARNTL2Q8WYA1 636 aa17.58■□□□□ 0.4
ERCC3-206ENST00000462306 BSNDQ8WZ55 320 aa17.58■□□□□ 0.4
ERCC3-206ENST00000462306 TGS1Q96RS0 853 aaKnown RBP17.58■□□□□ 0.4
ERCC3-206ENST00000462306 TRAIPQ9BWF2 469 aa17.58■□□□□ 0.4
ERCC3-206ENST00000462306 CSRNP2Q9H175 543 aa17.58■□□□□ 0.4
ERCC3-206ENST00000462306 ELAC1Q9H777 363 aaKnown RBP17.58■□□□□ 0.4
ERCC3-206ENST00000462306 POLD4Q9HCU8 107 aa17.58■□□□□ 0.4
ERCC3-206ENST00000462306 TMEM161AQ9NX61 479 aa17.58■□□□□ 0.4
ERCC3-206ENST00000462306 LRFN2Q9ULH4 789 aa17.58■□□□□ 0.4
ERCC3-206ENST00000462306 PCDHB7Q9Y5E2 793 aa17.58■□□□□ 0.4
ERCC3-206ENST00000462306 A0A0U1RQF3 1178 aa17.57■□□□□ 0.4
ERCC3-206ENST00000462306 LINC00271P0C7V0 271 aa17.57■□□□□ 0.4
ERCC3-206ENST00000462306 IBSPP21815 317 aaPredicted RBP17.57■□□□□ 0.4
ERCC3-206ENST00000462306 HOXA11P31270 313 aaPredicted RBP17.57■□□□□ 0.4
ERCC3-206ENST00000462306 GATMP50440 423 aa17.57■□□□□ 0.4
ERCC3-206ENST00000462306 MBTD1Q05BQ5 628 aa17.57■□□□□ 0.4
ERCC3-206ENST00000462306 ADGRE1Q14246 886 aa17.57■□□□□ 0.4
ERCC3-206ENST00000462306 RINT1Q6NUQ1 792 aa17.57■□□□□ 0.4
ERCC3-206ENST00000462306 C1orf186Q6ZWK4 172 aa17.57■□□□□ 0.4
ERCC3-206ENST00000462306 USP49Q70CQ1 688 aa17.57■□□□□ 0.4
ERCC3-206ENST00000462306 ECHDC2Q86YB7 292 aa17.57■□□□□ 0.4
ERCC3-206ENST00000462306 LINC00301Q8NCQ3 95 aa17.57■□□□□ 0.4
ERCC3-206ENST00000462306 ZNF396Q96N95 335 aaPredicted RBP17.57■□□□□ 0.4
ERCC3-206ENST00000462306 CLIC6Q96NY7 704 aa17.57■□□□□ 0.4
ERCC3-206ENST00000462306 C17orf80Q9BSJ5 609 aa17.57■□□□□ 0.4
ERCC3-206ENST00000462306 RUSC1Q9BVN2 902 aa17.57■□□□□ 0.4
ERCC3-206ENST00000462306 CCSER1Q9C0I3 900 aa17.57■□□□□ 0.4
ERCC3-206ENST00000462306 AGPAT5Q9NUQ2 364 aa17.57■□□□□ 0.4
ERCC3-206ENST00000462306 RNF216Q9NWF9 866 aaPredicted RBP17.57■□□□□ 0.4
ERCC3-206ENST00000462306 DACT1Q9NYF0 836 aa17.57■□□□□ 0.4
ERCC3-206ENST00000462306 TFIP11Q9UBB9 837 aaKnown RBP17.57■□□□□ 0.4
ERCC3-206ENST00000462306 PIN4Q9Y237 131 aaKnown RBP17.57■□□□□ 0.4
ERCC3-206ENST00000462306 MYH15Q9Y2K3 1946 aa17.57■□□□□ 0.4
ERCC3-206ENST00000462306 MYO9BQ13459 2157 aa17.56■□□□□ 0.4
ERCC3-206ENST00000462306 RFXAPO00287 272 aa17.56■□□□□ 0.4
ERCC3-206ENST00000462306 FOSL2P15408 326 aa17.56■□□□□ 0.4
ERCC3-206ENST00000462306 KARSQ15046 597 aaKnown RBP17.56■□□□□ 0.4
ERCC3-206ENST00000462306 PCBP1Q15365 356 aaKnown RBP eCLIP17.56■□□□□ 0.4
ERCC3-206ENST00000462306 AMHR2Q16671 573 aa17.56■□□□□ 0.4
ERCC3-206ENST00000462306 SPECC1Q5M775 1068 aa17.56■□□□□ 0.4
ERCC3-206ENST00000462306 CDCA2Q69YH5 1023 aaPredicted RBP17.56■□□□□ 0.4
ERCC3-206ENST00000462306 ZNF598Q86UK7 904 aaKnown RBP17.56■□□□□ 0.4
ERCC3-206ENST00000462306 CMTR2Q8IYT2 770 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms