RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 CALCRLQ16602 461 aa21.2■□□□□ 0.98
VARS-220ENST00000461874 CSPP1Q1MSJ5 1256 aa21.2■□□□□ 0.98
VARS-220ENST00000461874 LRRC55Q6ZSA7 311 aa21.2■□□□□ 0.98
VARS-220ENST00000461874 OTUD6AQ7L8S5 288 aa21.2■□□□□ 0.98
VARS-220ENST00000461874 ZNF598Q86UK7 904 aaKnown RBP21.2■□□□□ 0.98
VARS-220ENST00000461874 FAM178BQ8IXR5 827 aa21.2■□□□□ 0.98
VARS-220ENST00000461874 PPP2R3CQ969Q6 453 aa21.2■□□□□ 0.98
VARS-220ENST00000461874 IGFLR1Q9H665 355 aa21.2■□□□□ 0.98
VARS-220ENST00000461874 PCDHA12Q9UN75 941 aa21.2■□□□□ 0.98
VARS-220ENST00000461874 WNT7AO00755 349 aa21.19■□□□□ 0.98
VARS-220ENST00000461874 FGF18O76093 207 aa21.19■□□□□ 0.98
VARS-220ENST00000461874 SLITRK3O94933 977 aa21.19■□□□□ 0.98
VARS-220ENST00000461874 LAG3P18627 525 aa21.19■□□□□ 0.98
VARS-220ENST00000461874 RFC5P40937 340 aa21.19■□□□□ 0.98
VARS-220ENST00000461874 POLGP54098 1239 aaPredicted RBP21.19■□□□□ 0.98
VARS-220ENST00000461874 CYP4A11Q02928 519 aa21.19■□□□□ 0.98
VARS-220ENST00000461874 C8orf34Q49A92 452 aa21.19■□□□□ 0.98
VARS-220ENST00000461874 CLLU1OSQ5K130 101 aa21.19■□□□□ 0.98
VARS-220ENST00000461874 CCDC83Q8IWF9 413 aa21.19■□□□□ 0.98
VARS-220ENST00000461874 THNSL1Q8IYQ7 743 aa21.19■□□□□ 0.98
VARS-220ENST00000461874 ABI1Q8IZP0 508 aa21.19■□□□□ 0.98
VARS-220ENST00000461874 RNF169Q8NCN4 708 aa21.19■□□□□ 0.98
VARS-220ENST00000461874 NLRP4Q96MN2 994 aa21.19■□□□□ 0.98
VARS-220ENST00000461874 KIF2CQ99661 725 aa21.19■□□□□ 0.98
VARS-220ENST00000461874 LLPHQ9BRT6 129 aaKnown RBP21.19■□□□□ 0.98
VARS-220ENST00000461874 TRAIPQ9BWF2 469 aa21.19■□□□□ 0.98
VARS-220ENST00000461874 IFT122Q9HBG6 1241 aa21.19■□□□□ 0.98
VARS-220ENST00000461874 CD320Q9NPF0 282 aa21.19■□□□□ 0.98
VARS-220ENST00000461874 FNDC1Q4ZHG4 1894 aaPredicted RBP21.19■□□□□ 0.98
VARS-220ENST00000461874 ZBTB39O15060 712 aa21.18■□□□□ 0.98
VARS-220ENST00000461874 NEMFO60524 1076 aa21.18■□□□□ 0.98
VARS-220ENST00000461874 ATF7P17544 494 aaPredicted RBP21.18■□□□□ 0.98
VARS-220ENST00000461874 DLX2Q07687 328 aaPredicted RBP21.18■□□□□ 0.98
VARS-220ENST00000461874 ADAM15Q13444 863 aa21.18■□□□□ 0.98
VARS-220ENST00000461874 ADGRD2Q7Z7M1 963 aa21.18■□□□□ 0.98
VARS-220ENST00000461874 TPH2Q8IWU9 490 aa21.18■□□□□ 0.98
VARS-220ENST00000461874 LRRC43Q8N309 656 aa21.18■□□□□ 0.98
VARS-220ENST00000461874 PRPF31Q8WWY3 499 aaKnown RBP21.18■□□□□ 0.98
VARS-220ENST00000461874 TMEM143Q96AN5 459 aa21.18■□□□□ 0.98
VARS-220ENST00000461874 MTMR9Q96QG7 549 aa21.18■□□□□ 0.98
VARS-220ENST00000461874 HSD17B14Q9BPX1 270 aa21.18■□□□□ 0.98
VARS-220ENST00000461874 EIF2AK1Q9BQI3 630 aaKnown RBP21.18■□□□□ 0.98
VARS-220ENST00000461874 TTC12Q9H892 705 aaPredicted RBP21.18■□□□□ 0.98
VARS-220ENST00000461874 COL4A3BPQ9Y5P4 624 aa21.18■□□□□ 0.98
VARS-220ENST00000461874 KIAA1671Q9BY89 1806 aa21.18■□□□□ 0.98
VARS-220ENST00000461874 LINC01565O15544 149 aa21.17■□□□□ 0.98
VARS-220ENST00000461874 GUCY1B3Q02153 619 aa21.17■□□□□ 0.98
VARS-220ENST00000461874 SAFBQ15424 915 aaKnown RBP eCLIP21.17■□□□□ 0.98
VARS-220ENST00000461874 XKR9Q5GH70 373 aa21.17■□□□□ 0.98
VARS-220ENST00000461874 CATSPER4Q7RTX7 472 aa21.17■□□□□ 0.98
VARS-220ENST00000461874 PSPC1Q8WXF1 523 aaKnown RBP21.17■□□□□ 0.98
VARS-220ENST00000461874 ZSCAN31Q96LW9 406 aaPredicted RBP21.17■□□□□ 0.98
VARS-220ENST00000461874 FAM50BQ9Y247 325 aa21.17■□□□□ 0.98
VARS-220ENST00000461874 PCDHGC5Q9Y5F6 944 aa21.17■□□□□ 0.98
VARS-220ENST00000461874 ATG2AQ2TAZ0 1938 aa21.17■□□□□ 0.98
VARS-220ENST00000461874 GAS2O43903 313 aaKnown RBP21.16■□□□□ 0.98
VARS-220ENST00000461874 TBX10O75333 385 aa21.16■□□□□ 0.98
VARS-220ENST00000461874 LYPLA2O95372 231 aa21.16■□□□□ 0.98
VARS-220ENST00000461874 TXKP42681 527 aa21.16■□□□□ 0.98
VARS-220ENST00000461874 PHKA2P46019 1235 aa21.16■□□□□ 0.98
VARS-220ENST00000461874 PLCB3Q01970 1234 aa21.16■□□□□ 0.98
VARS-220ENST00000461874 LAMTOR4Q0VGL1 99 aa21.16■□□□□ 0.98
VARS-220ENST00000461874 EMC2Q15006 297 aa21.16■□□□□ 0.98
VARS-220ENST00000461874 TWF2Q6IBS0 349 aaKnown RBP21.16■□□□□ 0.98
VARS-220ENST00000461874 KCNT2Q6UVM3 1135 aa21.16■□□□□ 0.98
VARS-220ENST00000461874 GJD3Q8N144 294 aa21.16■□□□□ 0.98
VARS-220ENST00000461874 EFHBQ8N7U6 833 aa21.16■□□□□ 0.98
VARS-220ENST00000461874 HELQQ8TDG4 1101 aa21.16■□□□□ 0.98
VARS-220ENST00000461874 MICAL1Q8TDZ2 1067 aa21.16■□□□□ 0.98
VARS-220ENST00000461874 C8orf76Q96K31 380 aa21.16■□□□□ 0.98
VARS-220ENST00000461874 TLR9Q9NR96 1032 aa21.16■□□□□ 0.98
VARS-220ENST00000461874 PIN4Q9Y237 131 aaKnown RBP21.16■□□□□ 0.98
VARS-220ENST00000461874 LZTS1Q9Y250 596 aa21.16■□□□□ 0.98
VARS-220ENST00000461874 SRGAP2CP0DJJ0 459 aa21.15■□□□□ 0.98
VARS-220ENST00000461874 NRIP1P48552 1158 aa21.15■□□□□ 0.98
VARS-220ENST00000461874 ERVFC1P60507 584 aa21.15■□□□□ 0.98
VARS-220ENST00000461874 SRGAP1Q7Z6B7 1085 aa21.15■□□□□ 0.98
VARS-220ENST00000461874 TCP11Q8WWU5 503 aa21.15■□□□□ 0.98
VARS-220ENST00000461874 ZNF558Q96NG5 402 aa21.15■□□□□ 0.98
VARS-220ENST00000461874 TMEM60Q9H2L4 133 aa21.15■□□□□ 0.98
VARS-220ENST00000461874 EPHX3Q9H6B9 360 aa21.15■□□□□ 0.98
VARS-220ENST00000461874 SH2B1Q9NRF2 756 aaPredicted RBP21.15■□□□□ 0.98
VARS-220ENST00000461874 BMP2KQ9NSY1 1161 aaPredicted RBP21.15■□□□□ 0.98
VARS-220ENST00000461874 FSCN2O14926 492 aa21.14■□□□□ 0.97
VARS-220ENST00000461874 ASAP2O43150 1006 aa21.14■□□□□ 0.97
VARS-220ENST00000461874 ZNF623O75123 536 aa21.14■□□□□ 0.97
VARS-220ENST00000461874 SKIP12755 728 aa21.14■□□□□ 0.97
VARS-220ENST00000461874 ATP2B1P20020 1258 aa21.14■□□□□ 0.97
VARS-220ENST00000461874 CLUL1Q15846 466 aa21.14■□□□□ 0.97
VARS-220ENST00000461874 PDE12Q6L8Q7 609 aaKnown RBP21.14■□□□□ 0.97
VARS-220ENST00000461874 RBM23Q86U06 439 aaKnown RBP21.14■□□□□ 0.97
VARS-220ENST00000461874 FERMT3Q86UX7 667 aa21.14■□□□□ 0.97
VARS-220ENST00000461874 MRPS27Q92552 414 aaKnown RBP21.14■□□□□ 0.97
VARS-220ENST00000461874 KHSRPQ92945 711 aaKnown RBP eCLIP21.14■□□□□ 0.97
VARS-220ENST00000461874 C1QTNF1Q9BXJ1 281 aa21.14■□□□□ 0.97
VARS-220ENST00000461874 MRPL9Q9BYD2 267 aaKnown RBP21.14■□□□□ 0.97
VARS-220ENST00000461874 TLE6Q9H808 572 aa21.14■□□□□ 0.97
VARS-220ENST00000461874 MINDY3Q9H8M7 445 aa21.14■□□□□ 0.97
VARS-220ENST00000461874 ANKEF1Q9NU02 776 aa21.14■□□□□ 0.97
VARS-220ENST00000461874 FAM105AQ9NUU6 356 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms