RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 TYW1Q9NV66 732 aaKnown RBP9.91□□□□□ -0.82
LDB1-203ENST00000461873 NOL7Q9UMY1 257 aaKnown RBP9.91□□□□□ -0.82
LDB1-203ENST00000461873 A0A0U1RQF3 1178 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 ST18O60284 1047 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 MGEA5O60502 916 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 FGF18O76093 207 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 ITGB1P05556 798 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 SRGAP2CP0DJJ0 459 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 ALADP13716 330 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 NRIP1P48552 1158 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 GATMP50440 423 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 HMGN5P82970 282 aaKnown RBP9.9□□□□□ -0.82
LDB1-203ENST00000461873 CYP4A11Q02928 519 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 NR5A1Q13285 461 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 CTTNQ14247 550 aaKnown RBP9.9□□□□□ -0.82
LDB1-203ENST00000461873 MXD4Q14582 209 aaPredicted RBP9.9□□□□□ -0.82
LDB1-203ENST00000461873 PLA2G4FQ68DD2 849 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 GLB1LQ6UWU2 654 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 TMC7Q7Z402 723 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 ECHDC2Q86YB7 292 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 CCDC83Q8IWF9 413 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 C4orf19Q8IY42 314 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 GJD3Q8N144 294 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 SPPL3Q8TCT6 385 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 OXER1Q8TDS5 423 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 TMEM169Q96HH4 297 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 TRIM6Q9C030 488 aaPredicted RBP9.9□□□□□ -0.82
LDB1-203ENST00000461873 ADAMTS10Q9H324 1103 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 TTC12Q9H892 705 aaPredicted RBP9.9□□□□□ -0.82
LDB1-203ENST00000461873 RC3H2Q9HBD1 1191 aaKnown RBP9.9□□□□□ -0.82
LDB1-203ENST00000461873 KCNMB3Q9NPA1 279 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 SH2B1Q9NRF2 756 aaPredicted RBP9.9□□□□□ -0.82
LDB1-203ENST00000461873 SPG21Q9NZD8 308 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 CD207Q9UJ71 328 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 COL4A3BPQ9Y5P4 624 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 TRANK1O15050 2925 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 XIRP2A4UGR9 3374 aa9.9□□□□□ -0.82
LDB1-203ENST00000461873 CUL9Q8IWT3 2517 aa9.89□□□□□ -0.83
LDB1-203ENST00000461873 GRXCR2A6NFK2 248 aa9.89□□□□□ -0.83
LDB1-203ENST00000461873 BTBD18B2RXH4 712 aa9.89□□□□□ -0.83
LDB1-203ENST00000461873 EML1O00423 815 aa9.89□□□□□ -0.83
LDB1-203ENST00000461873 NR1I2O75469 434 aa9.89□□□□□ -0.83
LDB1-203ENST00000461873 IL9P15248 144 aa9.89□□□□□ -0.83
LDB1-203ENST00000461873 FGFR4P22455 802 aa9.89□□□□□ -0.83
LDB1-203ENST00000461873 PHKA2P46019 1235 aa9.89□□□□□ -0.83
LDB1-203ENST00000461873 FAM189BP81408 668 aa9.89□□□□□ -0.83
LDB1-203ENST00000461873 TARBP2Q15633 366 aaKnown RBP9.89□□□□□ -0.83
LDB1-203ENST00000461873 CLUL1Q15846 466 aa9.89□□□□□ -0.83
LDB1-203ENST00000461873 ANO5Q75V66 913 aa9.89□□□□□ -0.83
LDB1-203ENST00000461873 SRGAP1Q7Z6B7 1085 aa9.89□□□□□ -0.83
LDB1-203ENST00000461873 COLGALT1Q8NBJ5 622 aa9.89□□□□□ -0.83
LDB1-203ENST00000461873 NSUN7Q8NE18 718 aaKnown RBP9.89□□□□□ -0.83
LDB1-203ENST00000461873 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.89□□□□□ -0.83
LDB1-203ENST00000461873 DYDC2Q96IM9 177 aa9.89□□□□□ -0.83
LDB1-203ENST00000461873 CDCA3Q99618 268 aaPredicted RBP9.89□□□□□ -0.83
LDB1-203ENST00000461873 LLPHQ9BRT6 129 aaKnown RBP9.89□□□□□ -0.83
LDB1-203ENST00000461873 RAB34Q9BZG1 259 aa9.89□□□□□ -0.83
LDB1-203ENST00000461873 NGRNQ9NPE2 291 aaKnown RBP9.89□□□□□ -0.83
LDB1-203ENST00000461873 BMP2KQ9NSY1 1161 aaPredicted RBP9.89□□□□□ -0.83
LDB1-203ENST00000461873 GJB4Q9NTQ9 266 aa9.89□□□□□ -0.83
LDB1-203ENST00000461873 PRKAG3Q9UGI9 489 aa9.89□□□□□ -0.83
LDB1-203ENST00000461873 INPP5FQ9Y2H2 1132 aa9.89□□□□□ -0.83
LDB1-203ENST00000461873 HCN4Q9Y3Q4 1203 aa9.89□□□□□ -0.83
LDB1-203ENST00000461873 FNDC1Q4ZHG4 1894 aaPredicted RBP9.89□□□□□ -0.83
LDB1-203ENST00000461873 TMEM150BA6NC51 233 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 JAK2O60674 1132 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 CSDE1O75534 798 aaKnown RBP9.88□□□□□ -0.83
LDB1-203ENST00000461873 DGAT1O75907 488 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 CTDNEP1O95476 244 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 MCM7P33993 719 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 RBM25P49756 843 aaKnown RBP9.88□□□□□ -0.83
LDB1-203ENST00000461873 NPEPPSP55786 919 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 GUCY1B3Q02153 619 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 HYAL1Q12794 435 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 SMAD4Q13485 552 aaKnown RBP9.88□□□□□ -0.83
LDB1-203ENST00000461873 EMC2Q15006 297 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 PCBP1Q15365 356 aaKnown RBP eCLIP9.88□□□□□ -0.83
LDB1-203ENST00000461873 NPY5RQ15761 445 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 TMEM31Q5JXX7 168 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 PLPP4Q5VZY2 271 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 HAUS3Q68CZ6 603 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 KCNT2Q6UVM3 1135 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 FAM178BQ8IXR5 827 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 EFHBQ8N7U6 833 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 RNF149Q8NC42 400 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 CNNM3Q8NE01 707 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 HELQQ8TDG4 1101 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 MRPS27Q92552 414 aaKnown RBP9.88□□□□□ -0.83
LDB1-203ENST00000461873 TMEM143Q96AN5 459 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 TCF25Q9BQ70 676 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 EIF2AK1Q9BQI3 630 aaKnown RBP9.88□□□□□ -0.83
LDB1-203ENST00000461873 GBP3Q9H0R5 595 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 UBN1Q9NPG3 1134 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 FAM105AQ9NUU6 356 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 RGL1Q9NZL6 768 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 KANSL3Q9P2N6 904 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 STK39Q9UEW8 545 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 VAV3Q9UKW4 847 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 LZTS1Q9Y250 596 aa9.88□□□□□ -0.83
LDB1-203ENST00000461873 STK24Q9Y6E0 443 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms