RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 MCPH1Q8NEM0 835 aa11.31□□□□□ -0.6
SPTAN1-204ENST00000461855 ZNF668Q96K58 619 aaPredicted RBP11.31□□□□□ -0.6
SPTAN1-204ENST00000461855 AK8Q96MA6 479 aa11.31□□□□□ -0.6
SPTAN1-204ENST00000461855 YME1L1Q96TA2 773 aa11.31□□□□□ -0.6
SPTAN1-204ENST00000461855 ZSCAN16Q9H4T2 348 aaPredicted RBP11.31□□□□□ -0.6
SPTAN1-204ENST00000461855 MINDY3Q9H8M7 445 aa11.31□□□□□ -0.6
SPTAN1-204ENST00000461855 RNF216Q9NWF9 866 aaPredicted RBP11.31□□□□□ -0.6
SPTAN1-204ENST00000461855 TMEM161AQ9NX61 479 aa11.31□□□□□ -0.6
SPTAN1-204ENST00000461855 LMCD1Q9NZU5 365 aa11.31□□□□□ -0.6
SPTAN1-204ENST00000461855 ADGRA3Q8IWK6 1321 aa11.31□□□□□ -0.6
SPTAN1-204ENST00000461855 ARID2Q68CP9 1835 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 DENND3A2RUS2 1198 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 VPS37CA5D8V6 355 aaPredicted RBP11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 PP2D1A8MPX8 630 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 ZNF623O75123 536 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 CSDE1O75534 798 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 EYA4O95677 639 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 EOMESO95936 686 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 FOSL2P15408 326 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 FGFR4P22455 802 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 SFPQP23246 707 aaKnown RBP eCLIP11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 GLRA2P23416 452 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 CDC25AP30304 524 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 CCT6AP40227 531 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 CAPSQ13938 189 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 SF3A1Q15459 793 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 AMHR2Q16671 573 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 KRT79Q5XKE5 535 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 PADI6Q6TGC4 694 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 ECHDC2Q86YB7 292 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 HSCBQ8IWL3 235 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 ASAP3Q8TDY4 903 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 SNX29Q8TEQ0 813 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 NLRP4Q96MN2 994 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 PNMA5Q96PV4 448 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 AGPAT5Q9NUQ2 364 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 DDX19AQ9NUU7 478 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 RNF19AQ9NV58 838 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 KIAA1024Q9UPX6 916 aa11.3□□□□□ -0.6
SPTAN1-204ENST00000461855 PRUNE2Q8WUY3 3088 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 MYO9BQ13459 2157 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 VWA3AA6NCI4 1184 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 H3BNC9 293 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 RFXAPO00287 272 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 USO1O60763 962 aaKnown RBP11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 RB1P06400 928 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 SRGAP2CP0DJJ0 459 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 ZSCAN20P17040 1043 aaPredicted RBP11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 ATF7P17544 494 aaPredicted RBP11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 LONP1P36776 959 aaKnown RBP11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 GRB10Q13322 594 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 TMEM119Q4V9L6 283 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 EPC2Q52LR7 807 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 CDCA2Q69YH5 1023 aaPredicted RBP11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 KCNK18Q7Z418 384 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 TMEM192Q8IY95 271 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 FIBCD1Q8N539 461 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 RNF149Q8NC42 400 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 ARNTL2Q8WYA1 636 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 RSPH1Q8WYR4 309 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 GAS2L1Q99501 681 aaPredicted RBP11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 C17orf80Q9BSJ5 609 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 BHMT2Q9H2M3 363 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 CERS4Q9HA82 394 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 GPRC5CQ9NQ84 441 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 BMP2KQ9NSY1 1161 aaPredicted RBP11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 DACT1Q9NYF0 836 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 DNM3Q9UQ16 869 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 PCDHB7Q9Y5E2 793 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 CLIC4Q9Y696 253 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 MTCH2Q9Y6C9 303 aa11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 SPTBN5Q9NRC6 3674 aaKnown RBP11.29□□□□□ -0.6
SPTAN1-204ENST00000461855 ARHGEF35A5YM69 484 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 E9PMD0 336 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 AXLP30530 894 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 BMPR1AP36894 532 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 PHKA2P46019 1235 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 GRIN1Q05586 938 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 MBTD1Q05BQ5 628 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 TFDP1Q14186 410 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 FAM187BQ17R55 369 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 UBXN11Q5T124 520 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 FAM102BQ5T8I3 360 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 FAM173BQ6P4H8 233 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 C1orf186Q6ZWK4 172 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 MRPL10Q7Z7H8 261 aaKnown RBP11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 DAW1Q8N136 415 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 SYT2Q8N9I0 419 aaPredicted RBP11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 MAFAQ8NHW3 353 aaPredicted RBP11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 SCLT1Q96NL6 688 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 PLVAPQ9BX97 442 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 NT5C3AQ9H0P0 336 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 POLR3FQ9H1D9 316 aaPredicted RBP11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 FZD8Q9H461 694 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 FOXD4L1Q9NU39 408 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 FBXO2Q9UK22 296 aaPredicted RBP11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 RWDD3Q9Y3V2 267 aa11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 SRPRBQ9Y5M8 271 aaKnown RBP11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 MRPL42Q9Y6G3 142 aaKnown RBP11.28□□□□□ -0.6
SPTAN1-204ENST00000461855 HOXA2O43364 376 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms