RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 SCN5AQ14524 2016 aa6.54□□□□□ -1.36
SPTA1-202ENST00000461624 GPR75-ASB3A0A0A6YYF3 556 aa6.54□□□□□ -1.36
SPTA1-202ENST00000461624 ASNSP08243 561 aa6.54□□□□□ -1.36
SPTA1-202ENST00000461624 ZNF865P0CJ78 1059 aaPredicted RBP6.54□□□□□ -1.36
SPTA1-202ENST00000461624 RARBP10826 455 aa6.54□□□□□ -1.36
SPTA1-202ENST00000461624 BTDP43251 543 aa6.54□□□□□ -1.36
SPTA1-202ENST00000461624 LIG3P49916 1009 aa6.54□□□□□ -1.36
SPTA1-202ENST00000461624 TAP1Q03518 808 aa6.54□□□□□ -1.36
SPTA1-202ENST00000461624 METTL24Q5JXM2 366 aa6.54□□□□□ -1.36
SPTA1-202ENST00000461624 OTOP2Q7RTS6 562 aa6.54□□□□□ -1.36
SPTA1-202ENST00000461624 RNF180Q86T96 592 aa6.54□□□□□ -1.36
SPTA1-202ENST00000461624 RELL1Q8IUW5 271 aa6.54□□□□□ -1.36
SPTA1-202ENST00000461624 ANKRD44Q8N8A2 993 aa6.54□□□□□ -1.36
SPTA1-202ENST00000461624 ZNF507Q8TCN5 953 aa6.54□□□□□ -1.36
SPTA1-202ENST00000461624 MRRFQ96E11 262 aaKnown RBP6.54□□□□□ -1.36
SPTA1-202ENST00000461624 SUCLG2Q96I99 432 aa6.54□□□□□ -1.36
SPTA1-202ENST00000461624 MAML3Q96JK9 1138 aa6.54□□□□□ -1.36
SPTA1-202ENST00000461624 SLC38A3Q99624 504 aa6.54□□□□□ -1.36
SPTA1-202ENST00000461624 STK31Q9BXU1 1019 aa6.54□□□□□ -1.36
SPTA1-202ENST00000461624 WNT8AQ9H1J5 351 aa6.54□□□□□ -1.36
SPTA1-202ENST00000461624 UBE2ZQ9H832 354 aaPredicted RBP6.54□□□□□ -1.36
SPTA1-202ENST00000461624 HERC5Q9UII4 1024 aaKnown RBP6.54□□□□□ -1.36
SPTA1-202ENST00000461624 COL4A6Q14031 1691 aa6.54□□□□□ -1.36
SPTA1-202ENST00000461624 MROH7-TTC4A0A0A0MT08 1334 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 ELP1O95163 1332 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 MROH7Q68CQ1 1323 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 SYNRGQ9UMZ2 1314 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 MYADML2A6NDP7 307 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 PROB1E7EW31 1015 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 F6X3S4 739 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 STRNO43815 780 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 FGBP02675 491 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 IFIT1P09914 478 aaKnown RBP6.53□□□□□ -1.36
SPTA1-202ENST00000461624 CST5P28325 142 aaPredicted RBP6.53□□□□□ -1.36
SPTA1-202ENST00000461624 ZNF124Q15973 351 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 TSNAXIP1Q2TAA8 658 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 WDR78Q5VTH9 848 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 CATSPERGQ6ZRH7 1159 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 HS2ST1Q7LGA3 356 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 BMP8AQ7Z5Y6 402 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 DPP9Q86TI2 863 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 ABRAQ8N0Z2 381 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 SHCBP1Q8NEM2 672 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 FAM84AQ96KN4 292 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 MOV10L1Q9BXT6 1211 aaKnown RBP6.53□□□□□ -1.36
SPTA1-202ENST00000461624 MIR1-1HGQ9H1L0 117 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 MTIF3Q9H2K0 278 aaKnown RBP6.53□□□□□ -1.36
SPTA1-202ENST00000461624 CERS4Q9HA82 394 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 STARD7Q9NQZ5 370 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 ZBTB21Q9ULJ3 1066 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 SLC4A7Q9Y6M7 1214 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 ITPR1Q14643 2758 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 MCM3APO60318 1980 aa6.53□□□□□ -1.36
SPTA1-202ENST00000461624 COL11A1P12107 1806 aaPredicted RBP6.53□□□□□ -1.36
SPTA1-202ENST00000461624 PDS5AQ29RF7 1337 aaKnown RBP6.52□□□□□ -1.37
SPTA1-202ENST00000461624 ATP2A2P16615 1042 aaKnown RBP6.52□□□□□ -1.37
SPTA1-202ENST00000461624 VCAM1P19320 739 aa6.52□□□□□ -1.37
SPTA1-202ENST00000461624 KCNMB1Q16558 191 aa6.52□□□□□ -1.37
SPTA1-202ENST00000461624 HERC4Q5GLZ8 1057 aaPredicted RBP6.52□□□□□ -1.37
SPTA1-202ENST00000461624 AGMOQ6ZNB7 445 aa6.52□□□□□ -1.37
SPTA1-202ENST00000461624 SLC43A3Q8NBI5 491 aa6.52□□□□□ -1.37
SPTA1-202ENST00000461624 KLHDC4Q8TBB5 520 aa6.52□□□□□ -1.37
SPTA1-202ENST00000461624 NEK9Q8TD19 979 aa6.52□□□□□ -1.37
SPTA1-202ENST00000461624 NUP133Q8WUM0 1156 aa6.52□□□□□ -1.37
SPTA1-202ENST00000461624 ARNTL2Q8WYA1 636 aa6.52□□□□□ -1.37
SPTA1-202ENST00000461624 RSRP1Q9BUV0 290 aa6.52□□□□□ -1.37
SPTA1-202ENST00000461624 CWC22Q9HCG8 908 aaKnown RBP6.52□□□□□ -1.37
SPTA1-202ENST00000461624 PRDM7Q9NQW5 492 aa6.52□□□□□ -1.37
SPTA1-202ENST00000461624 METTL5Q9NRN9 209 aaKnown RBP6.52□□□□□ -1.37
SPTA1-202ENST00000461624 GINM1Q9NU53 330 aa6.52□□□□□ -1.37
SPTA1-202ENST00000461624 FAM86C1Q9NVL1 165 aa6.52□□□□□ -1.37
SPTA1-202ENST00000461624 CTNND2Q9UQB3 1225 aa6.52□□□□□ -1.37
SPTA1-202ENST00000461624 SIP14410 1827 aa6.52□□□□□ -1.37
SPTA1-202ENST00000461624 TANC1Q9C0D5 1861 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 HELZ2Q9BYK8 2649 aaKnown RBP6.51□□□□□ -1.37
SPTA1-202ENST00000461624 ATG2AQ2TAZ0 1938 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 MED19A0JLT2 244 aaPredicted RBP6.51□□□□□ -1.37
SPTA1-202ENST00000461624 LRRC10BA6NIK2 292 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 ARVCFO00192 962 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 CTAGE5O15320 804 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 ADCY6O43306 1168 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 MAP4K4O95819 1239 aaPredicted RBP6.51□□□□□ -1.37
SPTA1-202ENST00000461624 KCNA5P22460 613 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 AFMP43652 599 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 PHKA1P46020 1223 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 MESP2Q0VG99 397 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 KCNA10Q16322 511 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 TMEM67Q5HYA8 995 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 CYFIP1Q7L576 1253 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 ASCL5Q7RTU5 278 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 HDXQ7Z353 690 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 ATG9AQ7Z3C6 839 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 LPIN2Q92539 896 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 TSR2Q969E8 191 aaKnown RBP6.51□□□□□ -1.37
SPTA1-202ENST00000461624 BACH2Q9BYV9 841 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 SPATC1LQ9H0A9 340 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 BICC1Q9H694 974 aaKnown RBP6.51□□□□□ -1.37
SPTA1-202ENST00000461624 NAV2Q8IVL1 2488 aa6.51□□□□□ -1.37
SPTA1-202ENST00000461624 A0A0U1RQG5 324 aaPredicted RBP6.5□□□□□ -1.37
SPTA1-202ENST00000461624 PRAMEF27A3QJZ7 478 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms