RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 CR1LQ2VPA4 569 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 ZBTB41Q5SVQ8 909 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 PRAMEF18Q5VWM3 479 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 MBNL2Q5VZF2 373 aaKnown RBP3.96□□□□□ -1.78
HDAC6-212ENST00000461608 USP51Q70EK9 711 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 BMP8AQ7Z5Y6 402 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 RBM12BQ8IXT5 1001 aaKnown RBP3.96□□□□□ -1.78
HDAC6-212ENST00000461608 CCDC146Q8IYE0 955 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 TMEFF1Q8IYR6 380 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 MIER2Q8N344 545 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 DTX3Q8N9I9 347 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 SYT8Q8NBV8 401 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 OR14C36Q8NHC7 312 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 FBXO41Q8TF61 875 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 ERCC4Q92889 916 aaPredicted RBP3.96□□□□□ -1.78
HDAC6-212ENST00000461608 TSR2Q969E8 191 aaKnown RBP3.96□□□□□ -1.78
HDAC6-212ENST00000461608 DACT3Q96B18 629 aaPredicted RBP3.96□□□□□ -1.78
HDAC6-212ENST00000461608 ZNF496Q96IT1 587 aaPredicted RBP3.96□□□□□ -1.78
HDAC6-212ENST00000461608 HIST1H2AHQ96KK5 128 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 TEKT5Q96M29 485 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 HIST1H2AJQ99878 128 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 OR10A5Q9H207 317 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 ADAM7Q9H2U9 754 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 POFUT1Q9H488 388 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 RXFP1Q9HBX9 757 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 KCMF1Q9P0J7 381 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 SAP30BPQ9UHR5 308 aaKnown RBP3.96□□□□□ -1.78
HDAC6-212ENST00000461608 DENND2AQ9ULE3 1009 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 ZBTB21Q9ULJ3 1066 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 SYNPO2Q9UMS6 1093 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 CUTAO60888 179 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 H2AFYO75367 372 aaKnown RBP3.95□□□□□ -1.78
HDAC6-212ENST00000461608 MPIG6BO95866 241 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 KRT18P05783 430 aaKnown RBP3.95□□□□□ -1.78
HDAC6-212ENST00000461608 MYL1P05976 194 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 ASGR2P07307 311 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 XPAP23025 273 aaPredicted RBP3.95□□□□□ -1.78
HDAC6-212ENST00000461608 MC4RP32245 332 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 ECE1P42892 770 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 CDR1P51861 262 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 NRG3P56975 720 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 MEF2AQ02078 507 aaPredicted RBP3.95□□□□□ -1.78
HDAC6-212ENST00000461608 MYBPC3Q14896 1274 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 ACAP2Q15057 778 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 PCBP2Q15366 365 aaKnown RBP eCLIP3.95□□□□□ -1.78
HDAC6-212ENST00000461608 STILQ15468 1287 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 MUM1Q2TAK8 710 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 CCDC62Q6P9F0 684 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 FAM180AQ6UWF9 173 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 CD300LDQ6UXZ3 194 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 KCNK18Q7Z418 384 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 GLB1L2Q8IW92 636 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 CLIC6Q96NY7 704 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 MYL10Q9BUA6 226 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 QRSL1Q9H0R6 528 aaKnown RBP3.95□□□□□ -1.78
HDAC6-212ENST00000461608 ARHGAP20Q9P2F6 1191 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 RCAN3Q9UKA8 241 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 PCDHB6Q9Y5E3 794 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 MYPNQ86TC9 1320 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 IRS2Q9Y4H2 1338 aa3.95□□□□□ -1.78
HDAC6-212ENST00000461608 ELL2O00472 640 aaPredicted RBP3.94□□□□□ -1.78
HDAC6-212ENST00000461608 N4BP3O15049 544 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 OPHN1O60890 802 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 APOL3O95236 402 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 KCNC1P48547 511 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 SRSF2Q01130 221 aaKnown RBP3.94□□□□□ -1.78
HDAC6-212ENST00000461608 PFKPQ01813 784 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 HDAC1Q13547 482 aaPredicted RBP3.94□□□□□ -1.78
HDAC6-212ENST00000461608 LRRC41Q15345 812 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 DGKDQ16760 1214 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 PITRM1Q5JRX3 1037 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 RRP12Q5JTH9 1297 aaKnown RBP3.94□□□□□ -1.78
HDAC6-212ENST00000461608 TOR2AQ5JU69 321 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 B3GNT8Q7Z7M8 397 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 PROSER1Q86XN7 944 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 DGKHQ86XP1 1220 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 TTLL6Q8N841 843 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 TTC8Q8TAM2 541 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 TTC17Q96AE7 1141 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 EAF2Q96CJ1 260 aaPredicted RBP3.94□□□□□ -1.78
HDAC6-212ENST00000461608 CLIP3Q96DZ5 547 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 ACE2Q9BYF1 805 aaPredicted RBP3.94□□□□□ -1.78
HDAC6-212ENST00000461608 HAPLN2Q9GZV7 340 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 KCTD10Q9H3F6 313 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 MS4A5Q9H3V2 200 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 MTG2Q9H4K7 406 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 UCKL1Q9NWZ5 548 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 PLA2G2DQ9UNK4 145 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 CDY2AQ9Y6F7 541 aa3.94□□□□□ -1.78
HDAC6-212ENST00000461608 A0A0A6YYJ9 748 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 PRSS38A1L453 326 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 NDUFS2O75306 463 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 OFD1O75665 1012 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 RPLP2P05387 115 aaKnown RBP3.93□□□□□ -1.78
HDAC6-212ENST00000461608 C8BP07358 591 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 STAT5AP42229 794 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 IL12RB1P42701 662 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 RGS3P49796 1198 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 NCKAP1LP55160 1127 aa3.93□□□□□ -1.78
HDAC6-212ENST00000461608 SESN2P58004 480 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms