RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 FBXO47Q5MNV8 452 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 CNNM4Q6P4Q7 775 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 KRBA2Q6ZNG9 492 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 C16orf59Q7L2K0 433 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 DYMQ7RTS9 669 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 ZNF410Q86VK4 478 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 GRAMD1CQ8IYS0 662 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 ZNF710Q8N1W2 664 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 KIFAP3Q92845 792 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 PAGE5Q96GU1 130 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 OSMRQ99650 979 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 MAGEF1Q9HAY2 307 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 USP25Q9UHP3 1055 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 ODF2LQ9ULJ1 636 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 CASP1P29466 404 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 ZNF131P52739 623 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 EPHB4P54760 987 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 MDM2Q00987 491 aaPredicted RBP12.48□□□□□ -0.41
SSBP1-202ENST00000461433 POU5F1BQ06416 359 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 TCTN1Q2MV58 587 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 IFNLR1Q8IU57 520 aaPredicted RBP12.48□□□□□ -0.41
SSBP1-202ENST00000461433 TMEM199Q8N511 208 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 RNF149Q8NC42 400 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 NLRP7Q8WX94 980 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 NLRP4Q96MN2 994 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 C7orf25Q9BPX7 421 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 TRIM9Q9C026 710 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 MINDY3Q9H8M7 445 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 AGO3Q9H9G7 860 aaKnown RBP12.48□□□□□ -0.41
SSBP1-202ENST00000461433 GINS2Q9Y248 185 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 NOC2LQ9Y3T9 749 aaKnown RBP12.48□□□□□ -0.41
SSBP1-202ENST00000461433 SQORQ9Y6N5 450 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 M0QZ92 97 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 CSDE1O75534 798 aaKnown RBP12.48□□□□□ -0.41
SSBP1-202ENST00000461433 PARNO95453 639 aaKnown RBP12.48□□□□□ -0.41
SSBP1-202ENST00000461433 GHRP10912 638 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 DARSP14868 501 aaKnown RBP12.48□□□□□ -0.41
SSBP1-202ENST00000461433 EIF4BP23588 611 aaKnown RBP12.48□□□□□ -0.41
SSBP1-202ENST00000461433 RFC2P35250 354 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 NAMPTP43490 491 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 AFMP43652 599 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 PTENP60484 403 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 PLEKHG4Q58EX7 1191 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 CEP57L1Q8IYX8 460 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 DRC1Q96MC2 740 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 FIZ1Q96SL8 496 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 NTPCRQ9BSD7 190 aaKnown RBP12.48□□□□□ -0.41
SSBP1-202ENST00000461433 NFKBIZQ9BYH8 718 aa12.48□□□□□ -0.41
SSBP1-202ENST00000461433 ADGRA3Q8IWK6 1321 aa12.47□□□□□ -0.41
SSBP1-202ENST00000461433 FRMD3A2A2Y4 597 aa12.47□□□□□ -0.41
SSBP1-202ENST00000461433 KRT18P05783 430 aaKnown RBP12.47□□□□□ -0.41
SSBP1-202ENST00000461433 PLS3P13797 630 aa12.47□□□□□ -0.41
SSBP1-202ENST00000461433 MAGEA10P43363 369 aaPredicted RBP12.47□□□□□ -0.41
SSBP1-202ENST00000461433 NPTX2P47972 431 aa12.47□□□□□ -0.41
SSBP1-202ENST00000461433 PEX3P56589 373 aa12.47□□□□□ -0.41
SSBP1-202ENST00000461433 AMPD3Q01432 767 aa12.47□□□□□ -0.41
SSBP1-202ENST00000461433 FPGSQ05932 587 aa12.47□□□□□ -0.41
SSBP1-202ENST00000461433 CUL4BQ13620 913 aa12.47□□□□□ -0.41
SSBP1-202ENST00000461433 CDCA2Q69YH5 1023 aaPredicted RBP12.47□□□□□ -0.41
SSBP1-202ENST00000461433 TSHZ1Q6ZSZ6 1077 aa12.47□□□□□ -0.41
SSBP1-202ENST00000461433 DEFB128Q7Z7B8 93 aa12.47□□□□□ -0.41
SSBP1-202ENST00000461433 FAM228AQ86W67 206 aa12.47□□□□□ -0.41
SSBP1-202ENST00000461433 CNNM3Q8NE01 707 aa12.47□□□□□ -0.41
SSBP1-202ENST00000461433 TIGD1Q96MW7 591 aa12.47□□□□□ -0.41
SSBP1-202ENST00000461433 GDF15Q99988 308 aa12.47□□□□□ -0.41
SSBP1-202ENST00000461433 GCOM2Q9BZD3 368 aaPredicted RBP12.47□□□□□ -0.41
SSBP1-202ENST00000461433 BLZF1Q9H2G9 400 aa12.47□□□□□ -0.41
SSBP1-202ENST00000461433 C17orf75Q9HAS0 396 aa12.47□□□□□ -0.41
SSBP1-202ENST00000461433 IL23AQ9NPF7 189 aa12.47□□□□□ -0.41
SSBP1-202ENST00000461433 PDE4DIPQ5VU43 2346 aa12.46□□□□□ -0.41
SSBP1-202ENST00000461433 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.46□□□□□ -0.41
SSBP1-202ENST00000461433 LRRIQ4A6NIV6 560 aa12.46□□□□□ -0.41
SSBP1-202ENST00000461433 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
SSBP1-202ENST00000461433 ACRP10323 421 aa12.46□□□□□ -0.41
SSBP1-202ENST00000461433 FGFR4P22455 802 aa12.46□□□□□ -0.41
SSBP1-202ENST00000461433 CD52P31358 61 aa12.46□□□□□ -0.41
SSBP1-202ENST00000461433 TFDP1Q14186 410 aa12.46□□□□□ -0.41
SSBP1-202ENST00000461433 USP38Q8NB14 1042 aa12.46□□□□□ -0.41
SSBP1-202ENST00000461433 DBF4BQ8NFT6 615 aa12.46□□□□□ -0.41
SSBP1-202ENST00000461433 IFT74Q96LB3 600 aa12.46□□□□□ -0.41
SSBP1-202ENST00000461433 KIFC3Q9BVG8 833 aa12.46□□□□□ -0.41
SSBP1-202ENST00000461433 LRRC27Q9C0I9 530 aa12.46□□□□□ -0.41
SSBP1-202ENST00000461433 PARVGQ9HBI0 331 aa12.46□□□□□ -0.41
SSBP1-202ENST00000461433 ERVK-5Q9HDB9 667 aa12.46□□□□□ -0.41
SSBP1-202ENST00000461433 DACT1Q9NYF0 836 aa12.46□□□□□ -0.41
SSBP1-202ENST00000461433 PADI3Q9ULW8 664 aa12.46□□□□□ -0.41
SSBP1-202ENST00000461433 GTPBP6O43824 516 aaPredicted RBP12.45□□□□□ -0.42
SSBP1-202ENST00000461433 KLRC4O43908 158 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 RPS6KA5O75582 802 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 FAM13AO94988 1023 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 PHKA2P46019 1235 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 MBTD1Q05BQ5 628 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 EHHADHQ08426 723 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 PPIGQ13427 754 aaKnown RBP eCLIP12.45□□□□□ -0.42
SSBP1-202ENST00000461433 PPP2R5AQ15172 486 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 AMHR2Q16671 573 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 TAS1R3Q7RTX0 852 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 SRGAP1Q7Z6B7 1085 aa12.45□□□□□ -0.42
SSBP1-202ENST00000461433 RPUSD2Q8IZ73 545 aaKnown RBP12.45□□□□□ -0.42
SSBP1-202ENST00000461433 MYCT1Q8N699 235 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms