RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 NTRK3Q16288 839 aa9.82□□□□□ -0.84
HDAC9-220ENST00000461409 TMEM266Q2M3C6 531 aa9.82□□□□□ -0.84
HDAC9-220ENST00000461409 CTC1Q2NKJ3 1217 aa9.82□□□□□ -0.84
HDAC9-220ENST00000461409 PAN2Q504Q3 1202 aaKnown RBP9.82□□□□□ -0.84
HDAC9-220ENST00000461409 SLC24A5Q71RS6 500 aa9.82□□□□□ -0.84
HDAC9-220ENST00000461409 RTN4RL1Q86UN2 441 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-220ENST00000461409 FAM177A1Q8N128 213 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-220ENST00000461409 METTL13Q8N6R0 699 aa9.82□□□□□ -0.84
HDAC9-220ENST00000461409 MAP7D2Q96T17 732 aa9.82□□□□□ -0.84
HDAC9-220ENST00000461409 RIT2Q99578 217 aa9.82□□□□□ -0.84
HDAC9-220ENST00000461409 C22orf23Q9BZE7 217 aa9.82□□□□□ -0.84
HDAC9-220ENST00000461409 TMX1Q9H3N1 280 aa9.82□□□□□ -0.84
HDAC9-220ENST00000461409 EPHX3Q9H6B9 360 aa9.82□□□□□ -0.84
HDAC9-220ENST00000461409 ERVK-5Q9HDB9 667 aa9.82□□□□□ -0.84
HDAC9-220ENST00000461409 AAASQ9NRG9 546 aa9.82□□□□□ -0.84
HDAC9-220ENST00000461409 VPS54Q9P1Q0 977 aa9.82□□□□□ -0.84
HDAC9-220ENST00000461409 PRKAG3Q9UGI9 489 aa9.82□□□□□ -0.84
HDAC9-220ENST00000461409 PLAGL2Q9UPG8 496 aa9.82□□□□□ -0.84
HDAC9-220ENST00000461409 HCN4Q9Y3Q4 1203 aa9.82□□□□□ -0.84
HDAC9-220ENST00000461409 NLRC5Q86WI3 1866 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 PI4K2BG5E9Z4 385 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 CPLX1O14810 134 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 GAS7O60861 476 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 GPR37L1O60883 481 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 ALADP13716 330 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 IL9P15248 144 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 ATP4AP20648 1035 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 SFNP31947 248 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 NLRP5P59047 1200 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 CCT2P78371 535 aaKnown RBP9.81□□□□□ -0.84
HDAC9-220ENST00000461409 SSRP1Q08945 709 aaKnown RBP9.81□□□□□ -0.84
HDAC9-220ENST00000461409 HYAL1Q12794 435 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 FOXC1Q12948 553 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 CSPP1Q1MSJ5 1256 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 KIZQ2M2Z5 673 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 CPLX2Q6PUV4 134 aaKnown RBP9.81□□□□□ -0.84
HDAC9-220ENST00000461409 RUFY3Q7L099 469 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 KLHL23Q8NBE8 558 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 RDM1Q8NG50 284 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 RASGRP4Q8TDF6 673 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 TMEM40Q8WWA1 233 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 LENG9Q96B70 501 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 UIMC1Q96RL1 719 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 POP1Q99575 1024 aaKnown RBP9.81□□□□□ -0.84
HDAC9-220ENST00000461409 ADAM2Q99965 735 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 LRFN3Q9BTN0 628 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 NCOA5Q9HCD5 579 aaKnown RBP9.81□□□□□ -0.84
HDAC9-220ENST00000461409 ALG13Q9NP73 1137 aaKnown RBP9.81□□□□□ -0.84
HDAC9-220ENST00000461409 DISC1Q9NRI5 854 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 RGS18Q9NS28 235 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 NRBP2Q9NSY0 501 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 GABBR1Q9UBS5 961 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 ST3GAL5Q9UNP4 418 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 NOC2LQ9Y3T9 749 aaKnown RBP9.81□□□□□ -0.84
HDAC9-220ENST00000461409 PCDHB12Q9Y5F1 795 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 CYP46A1Q9Y6A2 500 aa9.81□□□□□ -0.84
HDAC9-220ENST00000461409 FSD2A1L4K1 749 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 C9IYK1 514 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 ADAMTS3O15072 1205 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 MGEA5O60502 916 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 GPR32O75388 356 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 VTNP04004 478 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 ITGB1P05556 798 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 IBSPP21815 317 aaPredicted RBP9.8□□□□□ -0.84
HDAC9-220ENST00000461409 PLA2G5P39877 138 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 CLCN3P51790 818 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 JAK3P52333 1124 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 PRKCEQ02156 737 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 UBE3AQ05086 875 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 ZP2Q05996 745 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 SPOUT1Q5T280 376 aaKnown RBP9.8□□□□□ -0.84
HDAC9-220ENST00000461409 LRCH2Q5VUJ6 765 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 GALNT17Q6IS24 598 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 TRMT1LQ7Z2T5 733 aaKnown RBP9.8□□□□□ -0.84
HDAC9-220ENST00000461409 ADHFE1Q8IWW8 467 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 PRR7Q8TB68 274 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 SPPL3Q8TCT6 385 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 OSMRQ99650 979 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 UPF3BQ9BZI7 483 aaKnown RBP9.8□□□□□ -0.84
HDAC9-220ENST00000461409 TM6SF1Q9BZW5 370 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 ELAC1Q9H777 363 aaKnown RBP9.8□□□□□ -0.84
HDAC9-220ENST00000461409 ATP6V0A4Q9HBG4 840 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 CD320Q9NPF0 282 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 TMEM161AQ9NX61 479 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 PCDHA4Q9UN74 947 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 AKT3Q9Y243 479 aa9.8□□□□□ -0.84
HDAC9-220ENST00000461409 TBKBP1A7MCY6 615 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 MSH4O15457 936 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 CHMP2AO43633 222 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 PPFIA3O75145 1194 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 CDKL5O76039 1030 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 CSPG5O95196 566 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 DEXIO95424 95 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 EIF4BP23588 611 aaKnown RBP9.79□□□□□ -0.84
HDAC9-220ENST00000461409 LTBRP36941 435 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 NDUFV1P49821 464 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 FAM189BP81408 668 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 TBC1D8BQ0IIM8 1120 aa9.79□□□□□ -0.84
HDAC9-220ENST00000461409 SMAD4Q13485 552 aaKnown RBP9.79□□□□□ -0.84
HDAC9-220ENST00000461409 CAMK1Q14012 370 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms