RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 ZNF277Q9NRM2 450 aaPredicted RBP4.05□□□□□ -1.76
VCL-203ENST00000461383 HSPBP1Q9NZL4 362 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 FTSJ1Q9UET6 329 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 PRSS50Q9UI38 385 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 DNM3Q9UQ16 869 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 PCDHB6Q9Y5E3 794 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 TPD52L2O43399 206 aaKnown RBP4.04□□□□□ -1.76
VCL-203ENST00000461383 NRP2O60462 931 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 MPIG6BO95866 241 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 PFKMP08237 780 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 RAP1GAPP47736 663 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 NRG3P56975 720 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 RHBDL3P58872 404 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 UBE4AQ14139 1066 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 ZNF267Q14586 743 aaPredicted RBP4.04□□□□□ -1.76
VCL-203ENST00000461383 WDR72Q3MJ13 1102 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 PHF19Q5T6S3 580 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 GORABQ5T7V8 394 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 FAM180AQ6UWF9 173 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 LMBR1LQ6UX01 489 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 OTOP2Q7RTS6 562 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 KANSL1Q7Z3B3 1105 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 GLB1L2Q8IW92 636 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 CPA5Q8WXQ8 436 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 FATE1Q969F0 183 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 TTC17Q96AE7 1141 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 TIFAQ96CG3 184 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 LIN37Q96GY3 246 aaPredicted RBP4.04□□□□□ -1.76
VCL-203ENST00000461383 ZSWIM3Q96MP5 696 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 CLIC6Q96NY7 704 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 WRNIP1Q96S55 665 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 MPHOSPH6Q99547 160 aaKnown RBP4.04□□□□□ -1.76
VCL-203ENST00000461383 TACO1Q9BSH4 297 aaKnown RBP4.04□□□□□ -1.76
VCL-203ENST00000461383 ADI1Q9BV57 179 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 AMNQ9BXJ7 453 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 C1orf112Q9NSG2 853 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 KCMF1Q9P0J7 381 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 ZFP69BQ9UJL9 534 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 CDY2AQ9Y6F7 541 aa4.04□□□□□ -1.76
VCL-203ENST00000461383 HRKO00198 91 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 OPHN1O60890 802 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 C8BP07358 591 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 CFPP27918 469 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 MC3RP41968 323 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 GPR15P49685 360 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 NCKAP1LP55160 1127 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 PURAQ00577 322 aaKnown RBP4.03□□□□□ -1.76
VCL-203ENST00000461383 PICALMQ13492 652 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 TRIM25Q14258 630 aaKnown RBP4.03□□□□□ -1.76
VCL-203ENST00000461383 GRM3Q14832 879 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 ANO4Q32M45 955 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 CCDC157Q569K6 752 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 MUM1L1Q5H9M0 696 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 SYCP2LQ5T4T6 812 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 MIGA2Q7L4E1 593 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 STK32CQ86UX6 486 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 PROSER1Q86XN7 944 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 STPG3Q8N7X2 389 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 SMARCC2Q8TAQ2 1214 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 SLC35G2Q8TBE7 412 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 MORC4Q8TE76 937 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 RPS6KC1Q96S38 1066 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 DIRC2Q96SL1 478 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 GTPBP4Q9BZE4 634 aaKnown RBP4.03□□□□□ -1.76
VCL-203ENST00000461383 EPB41L4BQ9H329 900 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 MYH16Q9H6N6 1097 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 ZNF552Q9H707 407 aaPredicted RBP4.03□□□□□ -1.76
VCL-203ENST00000461383 FAM204AQ9H8W3 233 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 DCP1AQ9NPI6 582 aaPredicted RBP4.03□□□□□ -1.76
VCL-203ENST00000461383 MAN1C1Q9NR34 630 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 TUBD1Q9UJT1 453 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 CROTQ9UKG9 612 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 DENND2AQ9ULE3 1009 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 PLA2G2DQ9UNK4 145 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 FAM50BQ9Y247 325 aa4.03□□□□□ -1.76
VCL-203ENST00000461383 CUTAO60888 179 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 CYP7B1O75881 506 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 POU2F2P09086 479 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 IFIT2P09913 472 aaKnown RBP4.02□□□□□ -1.77
VCL-203ENST00000461383 MED14OSP0DP75 135 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 MYBP10242 640 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 PDCP20941 246 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 ADCY8P40145 1251 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 IL13RA1P78552 427 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 CD83Q01151 205 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 MALLQ13021 153 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 GBX1Q14549 363 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 DGKDQ16760 1214 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 PGS1Q32NB8 556 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 COBLL1Q53SF7 1204 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 CCDC178Q5BJE1 867 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 GRAMD4Q6IC98 578 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 LILRA6Q6PI73 481 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 KLHDC10Q6PID8 442 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 PRR23BQ6ZRT6 265 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 LCNL1Q6ZST4 164 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 USP45Q70EL2 814 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 BMP8AQ7Z5Y6 402 aa4.02□□□□□ -1.77
VCL-203ENST00000461383 LDHDQ86WU2 507 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms