RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 IGHDP01880 384 aa13.2□□□□□ -0.3
PCYT1A-213ENST00000460827 ZSCAN20P17040 1043 aaPredicted RBP13.2□□□□□ -0.3
PCYT1A-213ENST00000460827 EIF4BP23588 611 aaKnown RBP13.2□□□□□ -0.3
PCYT1A-213ENST00000460827 SREBF1P36956 1147 aa13.2□□□□□ -0.3
PCYT1A-213ENST00000460827 PUM1Q14671 1186 aaKnown RBP eCLIP13.2□□□□□ -0.3
PCYT1A-213ENST00000460827 BMS1Q14692 1282 aaKnown RBP13.2□□□□□ -0.3
PCYT1A-213ENST00000460827 CCDC149Q6ZUS6 474 aa13.2□□□□□ -0.3
PCYT1A-213ENST00000460827 HEATR3Q7Z4Q2 680 aa13.2□□□□□ -0.3
PCYT1A-213ENST00000460827 DDX53Q86TM3 631 aaKnown RBP13.2□□□□□ -0.3
PCYT1A-213ENST00000460827 CCDC82Q8N4S0 544 aa13.2□□□□□ -0.3
PCYT1A-213ENST00000460827 BBXQ8WY36 941 aaPredicted RBP13.2□□□□□ -0.3
PCYT1A-213ENST00000460827 SLC39A7Q92504 469 aa13.2□□□□□ -0.3
PCYT1A-213ENST00000460827 VN1R3Q9BXE9 311 aa13.2□□□□□ -0.3
PCYT1A-213ENST00000460827 SFXN1Q9H9B4 322 aa13.2□□□□□ -0.3
PCYT1A-213ENST00000460827 DLL3Q9NYJ7 618 aa13.2□□□□□ -0.3
PCYT1A-213ENST00000460827 ANKRD11Q6UB99 2663 aaPredicted RBP13.19□□□□□ -0.3
PCYT1A-213ENST00000460827 SH2B2O14492 632 aaPredicted RBP13.19□□□□□ -0.3
PCYT1A-213ENST00000460827 C7P10643 843 aa13.19□□□□□ -0.3
PCYT1A-213ENST00000460827 GSPT1P15170 499 aaKnown RBP13.19□□□□□ -0.3
PCYT1A-213ENST00000460827 GIT2Q14161 759 aa13.19□□□□□ -0.3
PCYT1A-213ENST00000460827 WWC2Q6AWC2 1192 aa13.19□□□□□ -0.3
PCYT1A-213ENST00000460827 MIS18BP1Q6P0N0 1132 aa13.19□□□□□ -0.3
PCYT1A-213ENST00000460827 TMTC3Q6ZXV5 915 aa13.19□□□□□ -0.3
PCYT1A-213ENST00000460827 NIPA1Q7RTP0 329 aa13.19□□□□□ -0.3
PCYT1A-213ENST00000460827 RAB11FIP4Q86YS3 637 aa13.19□□□□□ -0.3
PCYT1A-213ENST00000460827 IGSF21Q96ID5 467 aa13.19□□□□□ -0.3
PCYT1A-213ENST00000460827 ZNF668Q96K58 619 aaPredicted RBP13.19□□□□□ -0.3
PCYT1A-213ENST00000460827 MRPL9Q9BYD2 267 aaKnown RBP13.19□□□□□ -0.3
PCYT1A-213ENST00000460827 ANO3Q9BYT9 981 aa13.19□□□□□ -0.3
PCYT1A-213ENST00000460827 RIC8AQ9NPQ8 531 aa13.19□□□□□ -0.3
PCYT1A-213ENST00000460827 IGSF9Q9P2J2 1179 aa13.19□□□□□ -0.3
PCYT1A-213ENST00000460827 WNT16Q9UBV4 365 aa13.19□□□□□ -0.3
PCYT1A-213ENST00000460827 IGLV3-22A0A075B6J6 115 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 FAM86B1E9PN63 330 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 MAGEB2O15479 319 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 PRC1O43663 620 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 ZC3H11AO75152 810 aaKnown RBP eCLIP13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 FOSP01100 380 aaPredicted RBP13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 FAM86B2P0C5J1 330 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 DARSP14868 501 aaKnown RBP13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 FGFR4P22455 802 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 PTPN14Q15678 1187 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 LETM2Q2VYF4 491 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 EFCAB12Q6NXP0 572 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 TRMT1LQ7Z2T5 733 aaKnown RBP13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 TEX2Q8IWB9 1127 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 CKAP2LQ8IYA6 745 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 LRRC71Q8N4P6 559 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 DCLK2Q8N568 766 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 TMEM87AQ8NBN3 555 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 RSAD2Q8WXG1 361 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 RIN2Q8WYP3 895 aaPredicted RBP13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 CNTNAP3BQ96NU0 1288 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 MTA3Q9BTC8 594 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 CNTNAP3Q9BZ76 1288 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 RWDD1Q9H446 243 aaPredicted RBP13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 DLGAP2Q9P1A6 1054 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 AKT3Q9Y243 479 aa13.18□□□□□ -0.3
PCYT1A-213ENST00000460827 CCDC69A6NI79 296 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 IPO5O00410 1097 aaKnown RBP13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 B4GALT3O60512 393 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 CSDE1O75534 798 aaKnown RBP13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 GALTP07902 379 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 CFHP08603 1231 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 CHMLP26374 656 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 GPC3P51654 580 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 CLCN4P51793 760 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 CASC1Q6TDU7 716 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 NFXL1Q6ZNB6 911 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 C15orf39Q6ZRI6 1047 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 PPFIBP1Q86W92 1011 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 PLA2G4DQ86XP0 818 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 ZNF710Q8N1W2 664 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 TMTC2Q8N394 836 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 FANCBQ8NB91 859 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 CRYGNQ8WXF5 182 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 RUBCNQ92622 972 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 MAP4K1Q92918 833 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 MAP7D2Q96T17 732 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 NRDE2Q9H7Z3 1164 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 TBC1D17Q9HA65 648 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 MTCL1Q9Y4B5 1905 aaKnown RBP13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 FAM208BQ5VWN6 2430 aa13.17□□□□□ -0.3
PCYT1A-213ENST00000460827 LAMA1P25391 3075 aa13.16□□□□□ -0.3
PCYT1A-213ENST00000460827 MIA3Q5JRA6 1907 aa13.16□□□□□ -0.3
PCYT1A-213ENST00000460827 MEIS3P2A8K0S8 358 aa13.16□□□□□ -0.3
PCYT1A-213ENST00000460827 STK25O00506 426 aa13.16□□□□□ -0.3
PCYT1A-213ENST00000460827 LILRB3O75022 631 aa13.16□□□□□ -0.3
PCYT1A-213ENST00000460827 CNPP09543 421 aaKnown RBP13.16□□□□□ -0.3
PCYT1A-213ENST00000460827 SP9P0CG40 484 aa13.16□□□□□ -0.3
PCYT1A-213ENST00000460827 CALM1P0DP23 149 aa13.16□□□□□ -0.3
PCYT1A-213ENST00000460827 CALM2P0DP24 149 aa13.16□□□□□ -0.3
PCYT1A-213ENST00000460827 CALM3P0DP25 149 aa13.16□□□□□ -0.3
PCYT1A-213ENST00000460827 TMOD1P28289 359 aa13.16□□□□□ -0.3
PCYT1A-213ENST00000460827 LIFRP42702 1097 aa13.16□□□□□ -0.3
PCYT1A-213ENST00000460827 PHKA2P46019 1235 aa13.16□□□□□ -0.3
PCYT1A-213ENST00000460827 SLC11A1P49279 550 aa13.16□□□□□ -0.3
PCYT1A-213ENST00000460827 CLK2P49760 499 aaKnown RBP13.16□□□□□ -0.3
PCYT1A-213ENST00000460827 ADCY7P51828 1080 aa13.16□□□□□ -0.3
PCYT1A-213ENST00000460827 NAPAP54920 295 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms