RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 ZNF598Q86UK7 904 aaKnown RBP13.22□□□□□ -0.29
SOX2-OT-201ENST00000460739 DIS3L2Q8IYB7 885 aaKnown RBP13.22□□□□□ -0.29
SOX2-OT-201ENST00000460739 ZNF579Q8NAF0 562 aaKnown RBP13.22□□□□□ -0.29
SOX2-OT-201ENST00000460739 SLC7A3Q8WY07 619 aa13.22□□□□□ -0.29
SOX2-OT-201ENST00000460739 C1QTNF1Q9BXJ1 281 aa13.22□□□□□ -0.29
SOX2-OT-201ENST00000460739 INO80BQ9C086 356 aaPredicted RBP13.22□□□□□ -0.29
SOX2-OT-201ENST00000460739 IGFLR1Q9H665 355 aa13.22□□□□□ -0.29
SOX2-OT-201ENST00000460739 DHX33Q9H6R0 707 aaKnown RBP13.22□□□□□ -0.29
SOX2-OT-201ENST00000460739 RGL1Q9NZL6 768 aa13.22□□□□□ -0.29
SOX2-OT-201ENST00000460739 FAM50BQ9Y247 325 aa13.22□□□□□ -0.29
SOX2-OT-201ENST00000460739 C5orf42Q9H799 3197 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 LINC01565O15544 149 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 TBX10O75333 385 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 CSPG5O95196 566 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 ATF7P17544 494 aaPredicted RBP13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 YWHABP31946 246 aaKnown RBP13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 RFC5P40937 340 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 POLGP54098 1239 aaPredicted RBP13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 PLCB3Q01970 1234 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 CLLU1OSQ5K130 101 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 OTUD6AQ7L8S5 288 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 ADGRD2Q7Z7M1 963 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 KSR1Q8IVT5 923 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 THNSL1Q8IYQ7 743 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 ABI1Q8IZP0 508 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 GJD3Q8N144 294 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 LRRC43Q8N309 656 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 EFHBQ8N7U6 833 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 KHSRPQ92945 711 aaKnown RBP eCLIP13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 DYDC2Q96IM9 177 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 CEP170P1Q96L14 293 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 ZSWIM4Q9H7M6 989 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 IFT122Q9HBG6 1241 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 TLR9Q9NR96 1032 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 PRKAG3Q9UGI9 489 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 PCDHA12Q9UN75 941 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 LIMCH1Q9UPQ0 1083 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 LZTS1Q9Y250 596 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 COL4A3BPQ9Y5P4 624 aa13.21□□□□□ -0.29
SOX2-OT-201ENST00000460739 WNT7AO00755 349 aa13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 GAS2O43903 313 aaKnown RBP13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 SLITRK3O94933 977 aa13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 PHKA2P46019 1235 aa13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 NRIP1P48552 1158 aa13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 ERVFC1P60507 584 aa13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 CYP4A11Q02928 519 aa13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 SMAD2Q15796 467 aaKnown RBP13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 CALCRLQ16602 461 aa13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 PDE12Q6L8Q7 609 aaKnown RBP13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 KCNT2Q6UVM3 1135 aa13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 RNF169Q8NCN4 708 aa13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 PRPF31Q8WWY3 499 aaKnown RBP13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 RSPH1Q8WYR4 309 aa13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 MSLNLQ96KJ4 702 aa13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 NLRP4Q96MN2 994 aa13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 HSD17B14Q9BPX1 270 aa13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 LLPHQ9BRT6 129 aaKnown RBP13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 EPHX3Q9H6B9 360 aa13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 TTC12Q9H892 705 aaPredicted RBP13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 PCDHGC5Q9Y5F6 944 aa13.2□□□□□ -0.3
SOX2-OT-201ENST00000460739 PI4K2BG5E9Z4 385 aa13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 FSCN2O14926 492 aa13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 ZBTB39O15060 712 aa13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 MBTPS2O43462 519 aa13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 NEMFO60524 1076 aa13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 LYPLA2O95372 231 aa13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 SKIP12755 728 aa13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 PPM1AP35813 382 aa13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 FOSBP53539 338 aa13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 SMAD4Q13485 552 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 CTTNQ14247 550 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 XKR9Q5GH70 373 aa13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 TWF2Q6IBS0 349 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 CATSPER4Q7RTX7 472 aa13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 RBM23Q86U06 439 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 TPH2Q8IWU9 490 aa13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 HELQQ8TDG4 1101 aa13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 TCP11Q8WWU5 503 aa13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 PSPC1Q8WXF1 523 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 MRPS27Q92552 414 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 TMEM143Q96AN5 459 aa13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 ZNF558Q96NG5 402 aa13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 MTMR9Q96QG7 549 aa13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 EIF2AK1Q9BQI3 630 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 MRPL9Q9BYD2 267 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 CLEC1BQ9P126 229 aa13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 CD207Q9UJ71 328 aa13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 PIN4Q9Y237 131 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-201ENST00000460739 FSD2A1L4K1 749 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 C19orf67A6NJJ6 358 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 ASAP2O43150 1006 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 ZNF623O75123 536 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 EYA4O95677 639 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 GLP2RO95838 553 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 COL9A1P20849 921 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 SSTR3P32745 418 aaPredicted RBP13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 TXKP42681 527 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 NDUFV1P49821 464 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 RAB27AP51159 221 aa13.18□□□□□ -0.3
SOX2-OT-201ENST00000460739 ZP2Q05996 745 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms