RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 SRGAP2CP0DJJ0 459 aa25.62■■□□□ 1.69
PTPN4-208ENST00000460289 RARRES1P49788 294 aa25.62■■□□□ 1.69
PTPN4-208ENST00000460289 LAMTOR4Q0VGL1 99 aa25.62■■□□□ 1.69
PTPN4-208ENST00000460289 MXD4Q14582 209 aaPredicted RBP25.62■■□□□ 1.69
PTPN4-208ENST00000460289 NAALADL2Q58DX5 795 aa25.62■■□□□ 1.69
PTPN4-208ENST00000460289 SRGAP1Q7Z6B7 1085 aa25.62■■□□□ 1.69
PTPN4-208ENST00000460289 FERMT3Q86UX7 667 aa25.62■■□□□ 1.69
PTPN4-208ENST00000460289 P2RX5Q93086 422 aa25.62■■□□□ 1.69
PTPN4-208ENST00000460289 NACC1Q96RE7 527 aa25.62■■□□□ 1.69
PTPN4-208ENST00000460289 IFT122Q9HBG6 1241 aa25.62■■□□□ 1.69
PTPN4-208ENST00000460289 BMP2KQ9NSY1 1161 aaPredicted RBP25.62■■□□□ 1.69
PTPN4-208ENST00000460289 COG5Q9UP83 839 aa25.62■■□□□ 1.69
PTPN4-208ENST00000460289 LAD1O00515 517 aa25.61■■□□□ 1.69
PTPN4-208ENST00000460289 EOMESO95936 686 aa25.61■■□□□ 1.69
PTPN4-208ENST00000460289 RPA1P27694 616 aa25.61■■□□□ 1.69
PTPN4-208ENST00000460289 GATMP50440 423 aa25.61■■□□□ 1.69
PTPN4-208ENST00000460289 FXR2P51116 673 aaKnown RBP eCLIP25.61■■□□□ 1.69
PTPN4-208ENST00000460289 MRPS5P82675 430 aaKnown RBP25.61■■□□□ 1.69
PTPN4-208ENST00000460289 PTGDRQ13258 359 aa25.61■■□□□ 1.69
PTPN4-208ENST00000460289 PDIA5Q14554 519 aa25.61■■□□□ 1.69
PTPN4-208ENST00000460289 NBR1Q14596 966 aa25.61■■□□□ 1.69
PTPN4-208ENST00000460289 RILPL1Q5EBL4 403 aa25.61■■□□□ 1.69
PTPN4-208ENST00000460289 TJAP1Q5JTD0 557 aa25.61■■□□□ 1.69
PTPN4-208ENST00000460289 HAUS3Q68CZ6 603 aa25.61■■□□□ 1.69
PTPN4-208ENST00000460289 CATSPER4Q7RTX7 472 aa25.61■■□□□ 1.69
PTPN4-208ENST00000460289 ECHDC2Q86YB7 292 aa25.61■■□□□ 1.69
PTPN4-208ENST00000460289 PIGOQ8TEQ8 1089 aa25.61■■□□□ 1.69
PTPN4-208ENST00000460289 SYMPKQ92797 1274 aaKnown RBP25.61■■□□□ 1.69
PTPN4-208ENST00000460289 RAB34Q9BZG1 259 aa25.61■■□□□ 1.69
PTPN4-208ENST00000460289 LMAN2LQ9H0V9 348 aa25.61■■□□□ 1.69
PTPN4-208ENST00000460289 PCDHB6Q9Y5E3 794 aa25.61■■□□□ 1.69
PTPN4-208ENST00000460289 STK24Q9Y6E0 443 aa25.61■■□□□ 1.69
PTPN4-208ENST00000460289 COL4A4P53420 1690 aaPredicted RBP25.61■■□□□ 1.69
PTPN4-208ENST00000460289 RALGAPA2Q2PPJ7 1873 aa25.6■■□□□ 1.69
PTPN4-208ENST00000460289 MED24O75448 989 aa25.6■■□□□ 1.69
PTPN4-208ENST00000460289 MUTP22033 750 aa25.6■■□□□ 1.69
PTPN4-208ENST00000460289 AAK1Q2M2I8 961 aa25.6■■□□□ 1.69
PTPN4-208ENST00000460289 TIGD5Q53EQ6 642 aa25.6■■□□□ 1.69
PTPN4-208ENST00000460289 LARP1BQ659C4 914 aaKnown RBP25.6■■□□□ 1.69
PTPN4-208ENST00000460289 TRAIPQ9BWF2 469 aa25.6■■□□□ 1.69
PTPN4-208ENST00000460289 XPNPEP1Q9NQW7 623 aa25.6■■□□□ 1.69
PTPN4-208ENST00000460289 AAASQ9NRG9 546 aa25.6■■□□□ 1.69
PTPN4-208ENST00000460289 LRWD1Q9UFC0 647 aa25.6■■□□□ 1.69
PTPN4-208ENST00000460289 DBR1Q9UK59 544 aaKnown RBP25.6■■□□□ 1.69
PTPN4-208ENST00000460289 SKIP12755 728 aa25.59■■□□□ 1.69
PTPN4-208ENST00000460289 TFDP1Q14186 410 aa25.59■■□□□ 1.69
PTPN4-208ENST00000460289 ABI1Q8IZP0 508 aa25.59■■□□□ 1.69
PTPN4-208ENST00000460289 RNF149Q8NC42 400 aa25.59■■□□□ 1.69
PTPN4-208ENST00000460289 HLA-CQ95604 372 aa25.59■■□□□ 1.69
PTPN4-208ENST00000460289 ASB2Q96Q27 587 aa25.59■■□□□ 1.69
PTPN4-208ENST00000460289 TMEM117Q9H0C3 514 aa25.59■■□□□ 1.69
PTPN4-208ENST00000460289 PIN4Q9Y237 131 aaKnown RBP25.59■■□□□ 1.69
PTPN4-208ENST00000460289 NLRC5Q86WI3 1866 aa25.58■■□□□ 1.69
PTPN4-208ENST00000460289 FGFR1P11362 822 aa25.58■■□□□ 1.69
PTPN4-208ENST00000460289 POU5F1BQ06416 359 aa25.58■■□□□ 1.69
PTPN4-208ENST00000460289 CUL4AQ13619 759 aa25.58■■□□□ 1.69
PTPN4-208ENST00000460289 PCBP1Q15365 356 aaKnown RBP eCLIP25.58■■□□□ 1.69
PTPN4-208ENST00000460289 SPOUT1Q5T280 376 aaKnown RBP25.58■■□□□ 1.69
PTPN4-208ENST00000460289 TWF2Q6IBS0 349 aaKnown RBP25.58■■□□□ 1.69
PTPN4-208ENST00000460289 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.58■■□□□ 1.69
PTPN4-208ENST00000460289 PLAGL2Q9UPG8 496 aa25.58■■□□□ 1.69
PTPN4-208ENST00000460289 PCDHB12Q9Y5F1 795 aa25.58■■□□□ 1.69
PTPN4-208ENST00000460289 A0A087WWV3 80 aa25.57■■□□□ 1.68
PTPN4-208ENST00000460289 ARL2P36404 184 aa25.57■■□□□ 1.68
PTPN4-208ENST00000460289 PRPHP41219 470 aa25.57■■□□□ 1.68
PTPN4-208ENST00000460289 PHKA2P46019 1235 aa25.57■■□□□ 1.68
PTPN4-208ENST00000460289 ZNF598Q86UK7 904 aaKnown RBP25.57■■□□□ 1.68
PTPN4-208ENST00000460289 RNF169Q8NCN4 708 aa25.57■■□□□ 1.68
PTPN4-208ENST00000460289 COL25A1Q9BXS0 654 aaPredicted RBP25.57■■□□□ 1.68
PTPN4-208ENST00000460289 TYW1Q9NV66 732 aaKnown RBP25.57■■□□□ 1.68
PTPN4-208ENST00000460289 GRM6O15303 877 aa25.56■■□□□ 1.68
PTPN4-208ENST00000460289 RAB27AP51159 221 aa25.56■■□□□ 1.68
PTPN4-208ENST00000460289 DTHD1Q6ZMT9 781 aa25.56■■□□□ 1.68
PTPN4-208ENST00000460289 IGSF22Q8N9C0 903 aa25.56■■□□□ 1.68
PTPN4-208ENST00000460289 KLHL23Q8NBE8 558 aa25.56■■□□□ 1.68
PTPN4-208ENST00000460289 MCPH1Q8NEM0 835 aa25.56■■□□□ 1.68
PTPN4-208ENST00000460289 RSPH1Q8WYR4 309 aa25.56■■□□□ 1.68
PTPN4-208ENST00000460289 CASD1Q96PB1 797 aa25.56■■□□□ 1.68
PTPN4-208ENST00000460289 NSUN3Q9H649 340 aaKnown RBP25.56■■□□□ 1.68
PTPN4-208ENST00000460289 AGPAT5Q9NUQ2 364 aa25.56■■□□□ 1.68
PTPN4-208ENST00000460289 GTF3C3Q9Y5Q9 886 aa25.56■■□□□ 1.68
PTPN4-208ENST00000460289 USO1O60763 962 aaKnown RBP25.55■■□□□ 1.68
PTPN4-208ENST00000460289 CCT6AP40227 531 aaKnown RBP25.55■■□□□ 1.68
PTPN4-208ENST00000460289 PTENP60484 403 aa25.55■■□□□ 1.68
PTPN4-208ENST00000460289 NCBP1Q09161 790 aaKnown RBP25.55■■□□□ 1.68
PTPN4-208ENST00000460289 CSPP1Q1MSJ5 1256 aa25.55■■□□□ 1.68
PTPN4-208ENST00000460289 POTEGQ6S5H5 508 aa25.55■■□□□ 1.68
PTPN4-208ENST00000460289 MINDY3Q9H8M7 445 aa25.55■■□□□ 1.68
PTPN4-208ENST00000460289 ALG13Q9NP73 1137 aaKnown RBP25.55■■□□□ 1.68
PTPN4-208ENST00000460289 ZNF623O75123 536 aa25.54■■□□□ 1.68
PTPN4-208ENST00000460289 LAG3P18627 525 aa25.54■■□□□ 1.68
PTPN4-208ENST00000460289 IFNLR1Q8IU57 520 aaPredicted RBP25.54■■□□□ 1.68
PTPN4-208ENST00000460289 LRRC43Q8N309 656 aa25.54■■□□□ 1.68
PTPN4-208ENST00000460289 SPPL3Q8TCT6 385 aa25.54■■□□□ 1.68
PTPN4-208ENST00000460289 ASAP3Q8TDY4 903 aa25.54■■□□□ 1.68
PTPN4-208ENST00000460289 FAM105AQ9NUU6 356 aa25.54■■□□□ 1.68
PTPN4-208ENST00000460289 RNF19AQ9NV58 838 aa25.54■■□□□ 1.68
PTPN4-208ENST00000460289 REV3LO60673 3130 aa25.53■■□□□ 1.68
PTPN4-208ENST00000460289 ARHGEF35A5YM69 484 aa25.53■■□□□ 1.68
PTPN4-208ENST00000460289 ERLIN2O94905 339 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms