RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 SARSP49591 514 aaKnown RBP16.64■□□□□ 0.25
ATG4B-213ENST00000460211 RARRES1P49788 294 aa16.64■□□□□ 0.25
ATG4B-213ENST00000460211 KRT79Q5XKE5 535 aa16.64■□□□□ 0.25
ATG4B-213ENST00000460211 SLC24A5Q71RS6 500 aa16.64■□□□□ 0.25
ATG4B-213ENST00000460211 RTN4RL1Q86UN2 441 aaPredicted RBP16.64■□□□□ 0.25
ATG4B-213ENST00000460211 NPAS4Q8IUM7 802 aa16.64■□□□□ 0.25
ATG4B-213ENST00000460211 PIGOQ8TEQ8 1089 aa16.64■□□□□ 0.25
ATG4B-213ENST00000460211 TMEM143Q96AN5 459 aa16.64■□□□□ 0.25
ATG4B-213ENST00000460211 NLRP4Q96MN2 994 aa16.64■□□□□ 0.25
ATG4B-213ENST00000460211 TMX1Q9H3N1 280 aa16.64■□□□□ 0.25
ATG4B-213ENST00000460211 ATP6V0A4Q9HBG4 840 aa16.64■□□□□ 0.25
ATG4B-213ENST00000460211 RGS18Q9NS28 235 aa16.64■□□□□ 0.25
ATG4B-213ENST00000460211 DBR1Q9UK59 544 aaKnown RBP16.64■□□□□ 0.25
ATG4B-213ENST00000460211 PCDHB7Q9Y5E2 793 aa16.64■□□□□ 0.25
ATG4B-213ENST00000460211 COL4A3BPQ9Y5P4 624 aa16.64■□□□□ 0.25
ATG4B-213ENST00000460211 WDR81Q562E7 1941 aa16.64■□□□□ 0.25
ATG4B-213ENST00000460211 MICAL3Q7RTP6 2002 aa16.63■□□□□ 0.25
ATG4B-213ENST00000460211 SIP14410 1827 aa16.63■□□□□ 0.25
ATG4B-213ENST00000460211 BRWD1Q9NSI6 2320 aa16.63■□□□□ 0.25
ATG4B-213ENST00000460211 A0A087WZ62 844 aa16.63■□□□□ 0.25
ATG4B-213ENST00000460211 LINC01553A4QN01 128 aa16.63■□□□□ 0.25
ATG4B-213ENST00000460211 MED24O75448 989 aa16.63■□□□□ 0.25
ATG4B-213ENST00000460211 SFPQP23246 707 aaKnown RBP eCLIP16.63■□□□□ 0.25
ATG4B-213ENST00000460211 MXD4Q14582 209 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-213ENST00000460211 FIBCD1Q8N539 461 aa16.63■□□□□ 0.25
ATG4B-213ENST00000460211 SP7Q8TDD2 431 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-213ENST00000460211 PRPF31Q8WWY3 499 aaKnown RBP16.63■□□□□ 0.25
ATG4B-213ENST00000460211 SAMD11Q96NU1 681 aa16.63■□□□□ 0.25
ATG4B-213ENST00000460211 FDXACB1Q9BRP7 624 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-213ENST00000460211 BMP2KQ9NSY1 1161 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-213ENST00000460211 FOXD4L1Q9NU39 408 aa16.63■□□□□ 0.25
ATG4B-213ENST00000460211 SRGAP2CP0DJJ0 459 aa16.62■□□□□ 0.25
ATG4B-213ENST00000460211 PDIA4P13667 645 aaKnown RBP16.62■□□□□ 0.25
ATG4B-213ENST00000460211 SYT1P21579 422 aa16.62■□□□□ 0.25
ATG4B-213ENST00000460211 IBSPP21815 317 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-213ENST00000460211 ERVK-21P61565 698 aa16.62■□□□□ 0.25
ATG4B-213ENST00000460211 ATP2C1P98194 919 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-213ENST00000460211 LAMTOR4Q0VGL1 99 aa16.62■□□□□ 0.25
ATG4B-213ENST00000460211 TFDP1Q14186 410 aa16.62■□□□□ 0.25
ATG4B-213ENST00000460211 ARL6IP4Q66PJ3 421 aaKnown RBP16.62■□□□□ 0.25
ATG4B-213ENST00000460211 SRGAP1Q7Z6B7 1085 aa16.62■□□□□ 0.25
ATG4B-213ENST00000460211 FERMT3Q86UX7 667 aa16.62■□□□□ 0.25
ATG4B-213ENST00000460211 IGSF22Q8N9C0 903 aa16.62■□□□□ 0.25
ATG4B-213ENST00000460211 MCPH1Q8NEM0 835 aa16.62■□□□□ 0.25
ATG4B-213ENST00000460211 SNX29Q8TEQ0 813 aa16.62■□□□□ 0.25
ATG4B-213ENST00000460211 LINC01599Q8WXQ3 324 aa16.62■□□□□ 0.25
ATG4B-213ENST00000460211 UBE2ZQ9H832 354 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-213ENST00000460211 CHST12Q9NRB3 414 aa16.62■□□□□ 0.25
ATG4B-213ENST00000460211 DACT1Q9NYF0 836 aa16.62■□□□□ 0.25
ATG4B-213ENST00000460211 ARHGEF35A5YM69 484 aa16.61■□□□□ 0.25
ATG4B-213ENST00000460211 GPR37L1O60883 481 aa16.61■□□□□ 0.25
ATG4B-213ENST00000460211 DGKIO75912 1065 aa16.61■□□□□ 0.25
ATG4B-213ENST00000460211 KCNA5P22460 613 aa16.61■□□□□ 0.25
ATG4B-213ENST00000460211 BTG3Q14201 252 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-213ENST00000460211 POTEGQ6S5H5 508 aa16.61■□□□□ 0.25
ATG4B-213ENST00000460211 CATSPER4Q7RTX7 472 aa16.61■□□□□ 0.25
ATG4B-213ENST00000460211 KSR1Q8IVT5 923 aa16.61■□□□□ 0.25
ATG4B-213ENST00000460211 RNF149Q8NC42 400 aa16.61■□□□□ 0.25
ATG4B-213ENST00000460211 LMCD1Q9NZU5 365 aa16.61■□□□□ 0.25
ATG4B-213ENST00000460211 RWDD3Q9Y3V2 267 aa16.61■□□□□ 0.25
ATG4B-213ENST00000460211 A0A087WWV3 80 aa16.6■□□□□ 0.25
ATG4B-213ENST00000460211 C9IYK1 514 aa16.6■□□□□ 0.25
ATG4B-213ENST00000460211 HOXA2O43364 376 aa16.6■□□□□ 0.25
ATG4B-213ENST00000460211 MGEA5O60502 916 aa16.6■□□□□ 0.25
ATG4B-213ENST00000460211 USO1O60763 962 aaKnown RBP16.6■□□□□ 0.25
ATG4B-213ENST00000460211 PHKA2P46019 1235 aa16.6■□□□□ 0.25
ATG4B-213ENST00000460211 NCBP1Q09161 790 aaKnown RBP16.6■□□□□ 0.25
ATG4B-213ENST00000460211 DSC3Q14574 896 aa16.6■□□□□ 0.25
ATG4B-213ENST00000460211 CMTR2Q8IYT2 770 aaKnown RBP16.6■□□□□ 0.25
ATG4B-213ENST00000460211 C17orf80Q9BSJ5 609 aa16.6■□□□□ 0.25
ATG4B-213ENST00000460211 ELAC1Q9H777 363 aaKnown RBP16.6■□□□□ 0.25
ATG4B-213ENST00000460211 TMEM161AQ9NX61 479 aa16.6■□□□□ 0.25
ATG4B-213ENST00000460211 KIAA1024Q9UPX6 916 aa16.6■□□□□ 0.25
ATG4B-213ENST00000460211 DNM3Q9UQ16 869 aa16.6■□□□□ 0.25
ATG4B-213ENST00000460211 ADGRA3Q8IWK6 1321 aa16.6■□□□□ 0.25
ATG4B-213ENST00000460211 TTC3P53804 2025 aa16.6■□□□□ 0.25
ATG4B-213ENST00000460211 VWA3AA6NCI4 1184 aa16.59■□□□□ 0.25
ATG4B-213ENST00000460211 PI4K2BG5E9Z4 385 aa16.59■□□□□ 0.25
ATG4B-213ENST00000460211 STX6O43752 255 aa16.59■□□□□ 0.25
ATG4B-213ENST00000460211 CSDE1O75534 798 aaKnown RBP16.59■□□□□ 0.25
ATG4B-213ENST00000460211 SKIP12755 728 aa16.59■□□□□ 0.25
ATG4B-213ENST00000460211 FGFR4P22455 802 aa16.59■□□□□ 0.25
ATG4B-213ENST00000460211 SSTR3P32745 418 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-213ENST00000460211 ARL2P36404 184 aa16.59■□□□□ 0.25
ATG4B-213ENST00000460211 FAM189BP81408 668 aa16.59■□□□□ 0.25
ATG4B-213ENST00000460211 POU5F1BQ06416 359 aa16.59■□□□□ 0.25
ATG4B-213ENST00000460211 PCBP1Q15365 356 aaKnown RBP eCLIP16.59■□□□□ 0.254e-7■■□□□ 11.9
ATG4B-213ENST00000460211 PADI6Q6TGC4 694 aa16.59■□□□□ 0.25
ATG4B-213ENST00000460211 KCTD17Q8N5Z5 321 aa16.59■□□□□ 0.25
ATG4B-213ENST00000460211 FBXO22Q8NEZ5 403 aa16.59■□□□□ 0.25
ATG4B-213ENST00000460211 ZNF689Q96CS4 500 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-213ENST00000460211 ZSCAN16Q9H4T2 348 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-213ENST00000460211 IFT122Q9HBG6 1241 aa16.59■□□□□ 0.25
ATG4B-213ENST00000460211 XPNPEP1Q9NQW7 623 aa16.59■□□□□ 0.25
ATG4B-213ENST00000460211 DDX19AQ9NUU7 478 aaKnown RBP16.59■□□□□ 0.25
ATG4B-213ENST00000460211 ARIH1Q9Y4X5 557 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-213ENST00000460211 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-213ENST00000460211 IL9P15248 144 aa16.58■□□□□ 0.24
ATG4B-213ENST00000460211 CYP11B2P19099 503 aa16.58■□□□□ 0.24
ATG4B-213ENST00000460211 IL17AQ16552 155 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms