RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 RFC5P40937 340 aa23.36■■□□□ 1.33
SRM-202ENST00000459997 OTUD6AQ7L8S5 288 aa23.36■■□□□ 1.33
SRM-202ENST00000459997 TPH2Q8IWU9 490 aa23.36■■□□□ 1.33
SRM-202ENST00000459997 COLGALT1Q8NBJ5 622 aa23.36■■□□□ 1.33
SRM-202ENST00000459997 CASD1Q96PB1 797 aa23.36■■□□□ 1.33
SRM-202ENST00000459997 KIF2CQ99661 725 aa23.36■■□□□ 1.33
SRM-202ENST00000459997 INO80BQ9C086 356 aaPredicted RBP23.36■■□□□ 1.33
SRM-202ENST00000459997 DHX33Q9H6R0 707 aaKnown RBP23.36■■□□□ 1.33
SRM-202ENST00000459997 TTC12Q9H892 705 aaPredicted RBP23.36■■□□□ 1.33
SRM-202ENST00000459997 BMP2KQ9NSY1 1161 aaPredicted RBP23.36■■□□□ 1.33
SRM-202ENST00000459997 RNF19AQ9NV58 838 aa23.36■■□□□ 1.33
SRM-202ENST00000459997 COL4A3BPQ9Y5P4 624 aa23.36■■□□□ 1.33
SRM-202ENST00000459997 A0A0U1RQF3 1178 aa23.35■■□□□ 1.33
SRM-202ENST00000459997 LAG3P18627 525 aa23.35■■□□□ 1.33
SRM-202ENST00000459997 GTF2F1P35269 517 aaKnown RBP eCLIP23.35■■□□□ 1.33
SRM-202ENST00000459997 IRS1P35568 1242 aa23.35■■□□□ 1.33
SRM-202ENST00000459997 TXKP42681 527 aa23.35■■□□□ 1.33
SRM-202ENST00000459997 PUS10Q3MIT2 529 aaKnown RBP23.35■■□□□ 1.33
SRM-202ENST00000459997 XKR9Q5GH70 373 aa23.35■■□□□ 1.33
SRM-202ENST00000459997 THNSL1Q8IYQ7 743 aa23.35■■□□□ 1.33
SRM-202ENST00000459997 PPP2R3CQ969Q6 453 aa23.35■■□□□ 1.33
SRM-202ENST00000459997 TMEM143Q96AN5 459 aa23.35■■□□□ 1.33
SRM-202ENST00000459997 C8orf76Q96K31 380 aa23.35■■□□□ 1.33
SRM-202ENST00000459997 ZSCAN31Q96LW9 406 aaPredicted RBP23.35■■□□□ 1.33
SRM-202ENST00000459997 EIF2AK1Q9BQI3 630 aaKnown RBP23.35■■□□□ 1.33
SRM-202ENST00000459997 IGFLR1Q9H665 355 aa23.35■■□□□ 1.33
SRM-202ENST00000459997 CWH43Q9H720 699 aa23.35■■□□□ 1.33
SRM-202ENST00000459997 CHST12Q9NRB3 414 aa23.35■■□□□ 1.33
SRM-202ENST00000459997 ZBTB39O15060 712 aa23.34■■□□□ 1.33
SRM-202ENST00000459997 FGF18O76093 207 aa23.34■■□□□ 1.33
SRM-202ENST00000459997 SLITRK3O94933 977 aa23.34■■□□□ 1.33
SRM-202ENST00000459997 IL9P15248 144 aa23.34■■□□□ 1.33
SRM-202ENST00000459997 ATP2B1P20020 1258 aa23.34■■□□□ 1.33
SRM-202ENST00000459997 EMC2Q15006 297 aa23.34■■□□□ 1.33
SRM-202ENST00000459997 CSPP1Q1MSJ5 1256 aa23.34■■□□□ 1.33
SRM-202ENST00000459997 CTC1Q2NKJ3 1217 aa23.34■■□□□ 1.33
SRM-202ENST00000459997 CATSPER4Q7RTX7 472 aa23.34■■□□□ 1.33
SRM-202ENST00000459997 LRRC43Q8N309 656 aa23.34■■□□□ 1.33
SRM-202ENST00000459997 PRPF31Q8WWY3 499 aaKnown RBP23.34■■□□□ 1.33
SRM-202ENST00000459997 PSPC1Q8WXF1 523 aaKnown RBP23.34■■□□□ 1.33
SRM-202ENST00000459997 PIN4Q9Y237 131 aaKnown RBP23.34■■□□□ 1.33
SRM-202ENST00000459997 MYO7AQ13402 2215 aa23.34■■□□□ 1.33
SRM-202ENST00000459997 NCOR1O75376 2440 aa23.34■■□□□ 1.33
SRM-202ENST00000459997 GRXCR2A6NFK2 248 aa23.33■■□□□ 1.33
SRM-202ENST00000459997 EOMESO95936 686 aa23.33■■□□□ 1.33
SRM-202ENST00000459997 ATF7P17544 494 aaPredicted RBP23.33■■□□□ 1.33
SRM-202ENST00000459997 LTBRP36941 435 aa23.33■■□□□ 1.33
SRM-202ENST00000459997 UBE3AQ05086 875 aa23.33■■□□□ 1.33
SRM-202ENST00000459997 CLLU1OSQ5K130 101 aa23.33■■□□□ 1.33
SRM-202ENST00000459997 TWF2Q6IBS0 349 aaKnown RBP23.33■■□□□ 1.33
SRM-202ENST00000459997 LRRC55Q6ZSA7 311 aa23.33■■□□□ 1.33
SRM-202ENST00000459997 ADGRD2Q7Z7M1 963 aa23.33■■□□□ 1.33
SRM-202ENST00000459997 ZNF598Q86UK7 904 aaKnown RBP23.33■■□□□ 1.33
SRM-202ENST00000459997 MTMR9Q96QG7 549 aa23.33■■□□□ 1.33
SRM-202ENST00000459997 IFT122Q9HBG6 1241 aa23.33■■□□□ 1.33
SRM-202ENST00000459997 SH2B1Q9NRF2 756 aaPredicted RBP23.33■■□□□ 1.33
SRM-202ENST00000459997 LINC01565O15544 149 aa23.32■■□□□ 1.32
SRM-202ENST00000459997 GAS2O43903 313 aaKnown RBP23.32■■□□□ 1.32
SRM-202ENST00000459997 SRGAP2CP0DJJ0 459 aa23.32■■□□□ 1.32
SRM-202ENST00000459997 MCM7P33993 719 aa23.32■■□□□ 1.32
SRM-202ENST00000459997 PHKA2P46019 1235 aa23.32■■□□□ 1.32
SRM-202ENST00000459997 HMGN5P82970 282 aaKnown RBP23.32■■□□□ 1.32
SRM-202ENST00000459997 LAMTOR4Q0VGL1 99 aa23.32■■□□□ 1.32
SRM-202ENST00000459997 HELQQ8TDG4 1101 aa23.32■■□□□ 1.32
SRM-202ENST00000459997 TCP11Q8WWU5 503 aa23.32■■□□□ 1.32
SRM-202ENST00000459997 HSD17B14Q9BPX1 270 aa23.32■■□□□ 1.32
SRM-202ENST00000459997 PCDHGC5Q9Y5F6 944 aa23.32■■□□□ 1.32
SRM-202ENST00000459997 GTF3C3Q9Y5Q9 886 aa23.32■■□□□ 1.32
SRM-202ENST00000459997 DLX2Q07687 328 aaPredicted RBP23.31■■□□□ 1.32
SRM-202ENST00000459997 FAM178BQ8IXR5 827 aa23.31■■□□□ 1.32
SRM-202ENST00000459997 FAM184AQ8NB25 1140 aa23.31■■□□□ 1.32
SRM-202ENST00000459997 MICAL1Q8TDZ2 1067 aa23.31■■□□□ 1.32
SRM-202ENST00000459997 MTRQ99707 1265 aa23.31■■□□□ 1.32
SRM-202ENST00000459997 TRAIPQ9BWF2 469 aa23.31■■□□□ 1.32
SRM-202ENST00000459997 TMEM60Q9H2L4 133 aa23.31■■□□□ 1.32
SRM-202ENST00000459997 TLR9Q9NR96 1032 aa23.31■■□□□ 1.32
SRM-202ENST00000459997 FAM50BQ9Y247 325 aa23.31■■□□□ 1.32
SRM-202ENST00000459997 POTEMA6NI47 508 aa23.3■■□□□ 1.32
SRM-202ENST00000459997 TBX10O75333 385 aa23.3■■□□□ 1.32
SRM-202ENST00000459997 LYPLA2O95372 231 aa23.3■■□□□ 1.32
SRM-202ENST00000459997 PBX3P40426 434 aa23.3■■□□□ 1.32
SRM-202ENST00000459997 NRIP1P48552 1158 aa23.3■■□□□ 1.32
SRM-202ENST00000459997 RBM25P49756 843 aaKnown RBP23.3■■□□□ 1.32
SRM-202ENST00000459997 ADAM15Q13444 863 aa23.3■■□□□ 1.32
SRM-202ENST00000459997 CLUL1Q15846 466 aa23.3■■□□□ 1.32
SRM-202ENST00000459997 KCNT2Q6UVM3 1135 aa23.3■■□□□ 1.32
SRM-202ENST00000459997 RBM23Q86U06 439 aaKnown RBP23.3■■□□□ 1.32
SRM-202ENST00000459997 FBXO18Q8NFZ0 1043 aa23.3■■□□□ 1.32
SRM-202ENST00000459997 CCDC43Q96MW1 224 aaKnown RBP23.3■■□□□ 1.32
SRM-202ENST00000459997 ZNF558Q96NG5 402 aa23.3■■□□□ 1.32
SRM-202ENST00000459997 FOXP1Q9H334 677 aaPredicted RBP23.3■■□□□ 1.32
SRM-202ENST00000459997 SKIP12755 728 aa23.29■■□□□ 1.32
SRM-202ENST00000459997 GNL2Q13823 731 aaKnown RBP23.29■■□□□ 1.32
SRM-202ENST00000459997 LONRF3Q496Y0 759 aa23.29■■□□□ 1.32
SRM-202ENST00000459997 SRGAP1Q7Z6B7 1085 aa23.29■■□□□ 1.32
SRM-202ENST00000459997 FERMT3Q86UX7 667 aa23.29■■□□□ 1.32
SRM-202ENST00000459997 RNF149Q8NC42 400 aa23.29■■□□□ 1.32
SRM-202ENST00000459997 LPPQ93052 612 aa23.29■■□□□ 1.32
SRM-202ENST00000459997 MRPL9Q9BYD2 267 aaKnown RBP23.29■■□□□ 1.32
SRM-202ENST00000459997 MINDY3Q9H8M7 445 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms