RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 PTENP60484 403 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 PPP2R2AP63151 447 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 GTF2IP78347 998 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 PPP2R5CQ13362 524 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 PDCLQ13371 301 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 TNFAIP1Q13829 316 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 HLTFQ14527 1009 aaKnown RBP eCLIP6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 KIF22Q14807 665 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 LACTB2Q53H82 288 aaPredicted RBP6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 DACT2Q5SW24 774 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 CEP85LQ5SZL2 805 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 FKBP1CQ5VVH2 108 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 SLFN13Q68D06 897 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 CDC42EP5Q6NZY7 148 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 C1orf186Q6ZWK4 172 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 TMC3Q7Z5M5 1100 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 FBXO11Q86XK2 927 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 SFR1Q86XK3 245 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 CCDC50Q8IVM0 306 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 C12orf56Q8IXR9 622 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 TLCD1Q96CP7 247 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 CABS1Q96KC9 395 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 RPS6KC1Q96S38 1066 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 PSMB7Q99436 277 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 HSD17B14Q9BPX1 270 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 PACSIN1Q9BY11 444 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 FGFBP2Q9BYJ0 223 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 DEFB129Q9H1M3 183 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 EHMT1Q9H9B1 1298 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 DBNDD1Q9H9R9 158 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 KCNQ5Q9NR82 932 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 SMARCAL1Q9NZC9 954 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 PI4KBQ9UBF8 816 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 PARP2Q9UGN5 583 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 VAV3Q9UKW4 847 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 NOC2LQ9Y3T9 749 aaKnown RBP6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 PPP2R3BQ9Y5P8 575 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 GJA3Q9Y6H8 435 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 ASTN1O14525 1302 aa6.65□□□□□ -1.35
UBQLN4-202ENST00000459954 ATRNL1Q5VV63 1379 aa6.65□□□□□ -1.35
UBQLN4-202ENST00000459954 SCN4AP35499 1836 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 NPHP3-ACAD11A0A0J9YXS1 232 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 GOLGA6L7A0A1B0GV03 622 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 POTEFA5A3E0 1075 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 CCDC169A6NNP5 214 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 USP17L15C9J2P7 530 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 USP17L13C9JLJ4 530 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 USP17L11C9JVI0 530 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 USP17L18D6R9N7 530 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 USP17L22D6RA61 530 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 USP17L17D6RBQ6 530 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 USP17L19D6RCP7 530 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 USP17L20D6RJB6 530 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 F8VZ95 297 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 MSH4O15457 936 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 DDX3YO15523 660 aaKnown RBP6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 TGFB1I1O43294 461 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 RAD17O75943 681 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 POTEIP0CG38 1075 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 BCRP11274 1271 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 ACTN1P12814 892 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 CTNNA1P35221 906 aaKnown RBP6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 FMO5P49326 533 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 GMPSP49915 693 aaPredicted RBP6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 SCNN1DP51172 638 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 GUCY2FP51841 1108 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 CASP5P51878 434 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 GTF2A1P52655 376 aaPredicted RBP6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 SMTNP53814 917 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 GALCP54803 685 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 SETQ01105 290 aaPredicted RBP6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 LMNB2Q03252 620 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 ENPEPQ07075 957 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 ACTN3Q08043 901 aaPredicted RBP6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 ZNF844Q08AG5 666 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 USP17L24Q0WX57 530 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 BYSLQ13895 437 aaKnown RBP6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 PLS1Q14651 629 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 UAP1Q16222 522 aaPredicted RBP6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 DOK7Q18PE1 504 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 CERKLQ49MI3 558 aaPredicted RBP6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 SYDE2Q5VT97 1194 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 DUPD1Q68J44 220 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 SMYD5Q6GMV2 418 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 APOBEC3HQ6NTF7 200 aaKnown RBP6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 CHADLQ6NUI6 762 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 C11orf63Q6NUN7 778 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 RINT1Q6NUQ1 792 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 USP17L6PQ6QN14 398 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 POTEGQ6S5H5 508 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 POTEEQ6S8J3 1075 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 KCTD1Q719H9 257 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 HS2ST1Q7LGA3 356 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 DAAM2Q86T65 1068 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 HOOK3Q86VS8 718 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 KLHL7Q8IXQ5 586 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 FAM186BQ8IYM0 893 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 SAMD3Q8N6K7 520 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 OLIG1Q8TAK6 271 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms