RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 BMS1Q14692 1282 aaKnown RBP11.76□□□□□ -0.53
HDLBP-227ENST00000458564 NTRK3Q16288 839 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 B3GNT9Q6UX72 402 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 ZBTB33Q86T24 672 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 RNF169Q8NCN4 708 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 HELQQ8TDG4 1101 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 NLRP7Q8WX94 980 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 BRF1Q92994 677 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 TMEM169Q96HH4 297 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 SCLT1Q96NL6 688 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 CEP89Q96ST8 783 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 APOL5Q9BWW9 433 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 NIFKQ9BYG3 293 aaKnown RBP11.76□□□□□ -0.53
HDLBP-227ENST00000458564 ZBP1Q9H171 429 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 DZANK1Q9NVP4 752 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 CDH22Q9UJ99 828 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 NAP1L2Q9ULW6 460 aaPredicted RBP11.76□□□□□ -0.53
HDLBP-227ENST00000458564 USTQ9Y2C2 406 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 WDR81Q562E7 1941 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 PROB1E7EW31 1015 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 CDC45O75419 566 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 PSMD10O75832 226 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 BRD1O95696 1058 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 PDGFBP01127 241 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-227ENST00000458564 IFNAR1P17181 557 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 SFPQP23246 707 aaKnown RBP eCLIP11.75□□□□□ -0.53
HDLBP-227ENST00000458564 SP100P23497 879 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-227ENST00000458564 PHKA2P46019 1235 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 DRP2Q13474 957 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 GIT2Q14161 759 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 XKR3Q5GH77 459 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 LRCH2Q5VUJ6 765 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 KIAA1841Q6NSI8 718 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 Q6ZUG5 572 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 ZNF410Q86VK4 478 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 ZDHHC14Q8IZN3 488 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 PHKBQ93100 1093 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 CCDC136Q96JN2 1154 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 ZNF668Q96K58 619 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-227ENST00000458564 TEKT3Q9BXF9 490 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 GCOM2Q9BZD3 368 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-227ENST00000458564 UNC45AQ9H3U1 944 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 SH3GLB2Q9NR46 395 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 TSHZ2Q9NRE2 1034 aa11.75□□□□□ -0.53
HDLBP-227ENST00000458564 RIF1Q5UIP0 2472 aaKnown RBP11.74□□□□□ -0.53
HDLBP-227ENST00000458564 CYP3A7-CYP3A51PA0A087WV96 503 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-227ENST00000458564 GALR2O43603 387 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-227ENST00000458564 CHMP2AO43633 222 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 GFRA3O60609 400 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 ZNF623O75123 536 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 STBD1O95210 358 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 CTSAP10619 480 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 SKIP12755 728 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 CPA1P15085 419 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 FGFR4P22455 802 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 CYP3A7P24462 503 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 RAB27AP51159 221 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 EVCP57679 992 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 AKAP17AQ02040 695 aaKnown RBP11.74□□□□□ -0.53
HDLBP-227ENST00000458564 Q4G0T1 1027 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 DDX53Q86TM3 631 aaKnown RBP11.74□□□□□ -0.53
HDLBP-227ENST00000458564 TMEM173Q86WV6 379 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-227ENST00000458564 VPS52Q8N1B4 723 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 TDRD5Q8NAT2 981 aaKnown RBP11.74□□□□□ -0.53
HDLBP-227ENST00000458564 IGSF21Q96ID5 467 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 SNX27Q96L92 541 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 JAKMIP1Q96N16 626 aaKnown RBP11.74□□□□□ -0.53
HDLBP-227ENST00000458564 C22orf23Q9BZE7 217 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 TBC1D13Q9NVG8 400 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 FAM86C1Q9NVL1 165 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 VPS54Q9P1Q0 977 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 STK39Q9UEW8 545 aa11.74□□□□□ -0.53
HDLBP-227ENST00000458564 PTPRZ1P23471 2315 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-227ENST00000458564 NT5C1B-RDH14C9J2C7 533 aa11.73□□□□□ -0.53
HDLBP-227ENST00000458564 ZC3H11AO75152 810 aaKnown RBP eCLIP11.73□□□□□ -0.53
HDLBP-227ENST00000458564 CSDE1O75534 798 aaKnown RBP11.73□□□□□ -0.53
HDLBP-227ENST00000458564 CXCL14O95715 111 aa11.73□□□□□ -0.53
HDLBP-227ENST00000458564 HSPA4P34932 840 aa11.73□□□□□ -0.53
HDLBP-227ENST00000458564 DNM2P50570 870 aa11.73□□□□□ -0.53
HDLBP-227ENST00000458564 NOMO2Q5JPE7 1267 aa11.73□□□□□ -0.53
HDLBP-227ENST00000458564 TWF2Q6IBS0 349 aaKnown RBP11.73□□□□□ -0.53
HDLBP-227ENST00000458564 BLOC1S2Q6QNY1 142 aa11.73□□□□□ -0.53
HDLBP-227ENST00000458564 MOXD1Q6UVY6 613 aa11.73□□□□□ -0.53
HDLBP-227ENST00000458564 GLB1LQ6UWU2 654 aa11.73□□□□□ -0.53
HDLBP-227ENST00000458564 FAM177A1Q8N128 213 aaPredicted RBP11.73□□□□□ -0.53
HDLBP-227ENST00000458564 PLCD3Q8N3E9 789 aa11.73□□□□□ -0.53
HDLBP-227ENST00000458564 TBCKQ8TEA7 893 aa11.73□□□□□ -0.53
HDLBP-227ENST00000458564 SLC22A17Q8WUG5 538 aa11.73□□□□□ -0.53
HDLBP-227ENST00000458564 ATOH1Q92858 354 aaPredicted RBP11.73□□□□□ -0.53
HDLBP-227ENST00000458564 MBOAT7Q96N66 472 aa11.73□□□□□ -0.53
HDLBP-227ENST00000458564 INO80BQ9C086 356 aaPredicted RBP11.73□□□□□ -0.53
HDLBP-227ENST00000458564 FAM105AQ9NUU6 356 aa11.73□□□□□ -0.53
HDLBP-227ENST00000458564 SEPT9Q9UHD8 586 aaPredicted RBP11.73□□□□□ -0.53
HDLBP-227ENST00000458564 SNX14Q9Y5W7 946 aa11.73□□□□□ -0.53
HDLBP-227ENST00000458564 DENND4AQ7Z401 1863 aa11.72□□□□□ -0.53
HDLBP-227ENST00000458564 A0A087WZ62 844 aa11.72□□□□□ -0.53
HDLBP-227ENST00000458564 M0R2N6 131 aa11.72□□□□□ -0.53
HDLBP-227ENST00000458564 MAFO75444 373 aaPredicted RBP11.72□□□□□ -0.53
HDLBP-227ENST00000458564 GALTP07902 379 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms