RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 CCHCR1Q8TD31 782 aa20.98■□□□□ 0.95
SNX27-204ENST00000458013 RAD54LQ92698 747 aa20.98■□□□□ 0.95
SNX27-204ENST00000458013 MAGI2Q86UL8 1455 aa20.98■□□□□ 0.95
SNX27-204ENST00000458013 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.97■□□□□ 0.95
SNX27-204ENST00000458013 FLOT2Q14254 428 aa20.97■□□□□ 0.95
SNX27-204ENST00000458013 ABCA5Q8WWZ7 1642 aa20.97■□□□□ 0.95
SNX27-204ENST00000458013 COPS2P61201 443 aa20.97■□□□□ 0.95
SNX27-204ENST00000458013 UBE3AQ05086 875 aa20.97■□□□□ 0.95
SNX27-204ENST00000458013 PSMD2Q13200 908 aa20.97■□□□□ 0.95
SNX27-204ENST00000458013 ZNF667Q5HYK9 610 aa20.97■□□□□ 0.95
SNX27-204ENST00000458013 ZBED8Q8IZ13 594 aa20.97■□□□□ 0.95
SNX27-204ENST00000458013 HPS3Q969F9 1004 aa20.97■□□□□ 0.95
SNX27-204ENST00000458013 APOBEC2Q9Y235 224 aaKnown RBP20.97■□□□□ 0.95
SNX27-204ENST00000458013 PAMP19021 973 aa20.97■□□□□ 0.95
SNX27-204ENST00000458013 GIPC2Q8TF65 315 aa20.97■□□□□ 0.95
SNX27-204ENST00000458013 UPF3AQ9H1J1 476 aaKnown RBP20.97■□□□□ 0.95
SNX27-204ENST00000458013 ZNF185O15231 689 aa20.97■□□□□ 0.95
SNX27-204ENST00000458013 TDRD3Q9H7E2 651 aaKnown RBP20.97■□□□□ 0.95
SNX27-204ENST00000458013 HMGB1P1B2RPK0 211 aaPredicted RBP20.97■□□□□ 0.95
SNX27-204ENST00000458013 PRPF4O43172 522 aaKnown RBP eCLIP20.97■□□□□ 0.95
SNX27-204ENST00000458013 TAS2R42Q7RTR8 314 aa20.97■□□□□ 0.95
SNX27-204ENST00000458013 DDIASQ8IXT1 998 aa20.97■□□□□ 0.95
SNX27-204ENST00000458013 ZNF564Q8TBZ8 553 aaPredicted RBP20.97■□□□□ 0.95
SNX27-204ENST00000458013 FAM161BQ96MY7 647 aa20.97■□□□□ 0.95
SNX27-204ENST00000458013 ATP6V0A4Q9HBG4 840 aa20.97■□□□□ 0.95
SNX27-204ENST00000458013 ABCC2Q92887 1545 aa20.96■□□□□ 0.95
SNX27-204ENST00000458013 ARL4CP56559 192 aa20.96■□□□□ 0.95
SNX27-204ENST00000458013 SMIM5Q71RC9 77 aa20.96■□□□□ 0.95
SNX27-204ENST00000458013 MS4A14Q96JA4 679 aa20.96■□□□□ 0.95
SNX27-204ENST00000458013 ZFYVE19Q96K21 471 aa20.96■□□□□ 0.95
SNX27-204ENST00000458013 TGS1Q96RS0 853 aaKnown RBP20.96■□□□□ 0.95
SNX27-204ENST00000458013 FGFR1OP2Q9NVK5 253 aa20.96■□□□□ 0.95
SNX27-204ENST00000458013 PSMC5P62195 406 aa20.96■□□□□ 0.95
SNX27-204ENST00000458013 SYF2O95926 243 aaKnown RBP20.96■□□□□ 0.95
SNX27-204ENST00000458013 NLGN1Q8N2Q7 840 aa20.96■□□□□ 0.95
SNX27-204ENST00000458013 ZBTB18Q99592 522 aa20.96■□□□□ 0.95
SNX27-204ENST00000458013 DDX47Q9H0S4 455 aaKnown RBP20.96■□□□□ 0.95
SNX27-204ENST00000458013 SCINQ9Y6U3 715 aa20.96■□□□□ 0.95
SNX27-204ENST00000458013 PDIA2Q13087 525 aaKnown RBP20.96■□□□□ 0.95
SNX27-204ENST00000458013 RNF219Q5W0B1 726 aaPredicted RBP20.96■□□□□ 0.95
SNX27-204ENST00000458013 SWSAP1Q6NVH7 229 aa20.96■□□□□ 0.95
SNX27-204ENST00000458013 TEKT2Q9UIF3 430 aa20.96■□□□□ 0.95
SNX27-204ENST00000458013 PEG3Q9GZU2 1588 aa20.96■□□□□ 0.95
SNX27-204ENST00000458013 E5RI56 91 aa20.96■□□□□ 0.95
SNX27-204ENST00000458013 ZSCAN9O15535 394 aaPredicted RBP20.96■□□□□ 0.95
SNX27-204ENST00000458013 CLDN3O15551 220 aa20.96■□□□□ 0.95
SNX27-204ENST00000458013 CTIFO43310 598 aaKnown RBP20.96■□□□□ 0.95
SNX27-204ENST00000458013 PRELPP51888 382 aa20.96■□□□□ 0.95
SNX27-204ENST00000458013 SUPT20HL1Q3ZLR7 823 aa20.96■□□□□ 0.95
SNX27-204ENST00000458013 SIK2Q9H0K1 926 aa20.96■□□□□ 0.95
SNX27-204ENST00000458013 TSC22D3Q99576 134 aa20.95■□□□□ 0.94
SNX27-204ENST00000458013 CRKP46108 304 aa20.95■□□□□ 0.94
SNX27-204ENST00000458013 ZC3H12BQ5HYM0 836 aaKnown RBP20.95■□□□□ 0.94
SNX27-204ENST00000458013 SEPT8Q92599 483 aa20.95■□□□□ 0.94
SNX27-204ENST00000458013 ING2Q9H160 280 aa20.95■□□□□ 0.94
SNX27-204ENST00000458013 PNMA2Q9UL42 364 aa20.95■□□□□ 0.94
SNX27-204ENST00000458013 CCDC144BQ3MJ40 725 aa20.95■□□□□ 0.94
SNX27-204ENST00000458013 TWF2Q6IBS0 349 aaKnown RBP20.95■□□□□ 0.94
SNX27-204ENST00000458013 ACTR5Q9H9F9 607 aaPredicted RBP20.95■□□□□ 0.94
SNX27-204ENST00000458013 TEX33O43247 280 aa20.95■□□□□ 0.94
SNX27-204ENST00000458013 ALDH18A1P54886 795 aaKnown RBP20.95■□□□□ 0.94
SNX27-204ENST00000458013 INTS2Q9H0H0 1204 aaKnown RBP20.95■□□□□ 0.94
SNX27-204ENST00000458013 CASS4Q9NQ75 786 aa20.95■□□□□ 0.94
SNX27-204ENST00000458013 ATP10AO60312 1499 aa20.95■□□□□ 0.94
SNX27-204ENST00000458013 ADGRL2O95490 1459 aa20.95■□□□□ 0.94
SNX27-204ENST00000458013 DENND3A2RUS2 1198 aa20.95■□□□□ 0.94
SNX27-204ENST00000458013 PRDX5P30044 214 aa20.95■□□□□ 0.94
SNX27-204ENST00000458013 CUL1Q13616 776 aa20.95■□□□□ 0.94
SNX27-204ENST00000458013 PADI6Q6TGC4 694 aa20.95■□□□□ 0.94
SNX27-204ENST00000458013 EGFL8Q99944 293 aa20.95■□□□□ 0.94
SNX27-204ENST00000458013 SH2D3AQ9BRG2 576 aa20.95■□□□□ 0.94
SNX27-204ENST00000458013 NDFIP2Q9NV92 336 aa20.95■□□□□ 0.94
SNX27-204ENST00000458013 GTPBP10A4D1E9 387 aaKnown RBP20.94■□□□□ 0.94
SNX27-204ENST00000458013 NEMP1O14524 444 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 FCER1AP12319 257 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 KCNH2Q12809 1159 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 LRRC23Q53EV4 343 aaPredicted RBP20.94■□□□□ 0.94
SNX27-204ENST00000458013 DHX38Q92620 1227 aaKnown RBP20.94■□□□□ 0.94
SNX27-204ENST00000458013 SLC10A4Q96EP9 437 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 IL6STP40189 918 aaPredicted RBP20.94■□□□□ 0.94
SNX27-204ENST00000458013 MDM2Q00987 491 aaPredicted RBP20.94■□□□□ 0.94
SNX27-204ENST00000458013 GRAMD4Q6IC98 578 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 TAGAPQ8N103 731 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 ZCCHC17Q9NP64 241 aaKnown RBP20.94■□□□□ 0.94
SNX27-204ENST00000458013 FAM217BQ9NTX9 383 aaPredicted RBP20.94■□□□□ 0.94
SNX27-204ENST00000458013 SUN2Q9UH99 717 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 SLC8A2Q9UPR5 921 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 IFNAR1P17181 557 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 CDC27P30260 824 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 NCAPHQ15003 741 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 DHX40Q8IX18 779 aaKnown RBP20.94■□□□□ 0.94
SNX27-204ENST00000458013 THEM5Q8N1Q8 247 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 PIGBQ92521 554 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 PRMT1Q99873 361 aaKnown RBP20.94■□□□□ 0.94
SNX27-204ENST00000458013 CEP72Q9P209 647 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 ACAD11Q709F0 780 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 NRBF2Q96F24 287 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 RMDN3Q96TC7 470 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 INSRP06213 1382 aa20.94■□□□□ 0.94
SNX27-204ENST00000458013 ATP9BO43861 1147 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms