RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 GMCL1Q96IK5 515 aa14.73□□□□□ -0.05
TOP3B-213ENST00000457179 BRCA2P51587 3418 aa14.73□□□□□ -0.05
TOP3B-213ENST00000457179 CTNNA1P35221 906 aaKnown RBP14.72□□□□□ -0.05
TOP3B-213ENST00000457179 SSR1P43307 286 aaKnown RBP14.72□□□□□ -0.05
TOP3B-213ENST00000457179 COASYQ13057 564 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 BYSLQ13895 437 aaKnown RBP14.72□□□□□ -0.05
TOP3B-213ENST00000457179 CDCA2Q69YH5 1023 aaPredicted RBP14.72□□□□□ -0.05
TOP3B-213ENST00000457179 CENPPQ6IPU0 288 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 CHADLQ6NUI6 762 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 TSGA10Q9BZW7 698 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 SH2D4AQ9H788 454 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 NOVA2Q9UNW9 492 aaKnown RBP14.72□□□□□ -0.05
TOP3B-213ENST00000457179 PCDHA13Q9Y5I0 950 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 ZHX2Q9Y6X8 837 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 DCDC2CA8MYV0 355 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 GFPT1Q06210 699 aaPredicted RBP14.72□□□□□ -0.05
TOP3B-213ENST00000457179 RDH13Q8NBN7 331 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 GMCL1P1Q8NEA9 526 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 MDM1Q8TC05 714 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 WNK4Q96J92 1243 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 TMBIM4Q9HC24 238 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 CNOT8Q9UFF9 292 aaKnown RBP14.72□□□□□ -0.05
TOP3B-213ENST00000457179 DNM3Q9UQ16 869 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 CDK5RAP2Q96SN8 1893 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 GAS7O60861 476 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 ARP10275 920 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 KIF11P52732 1056 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 HMGCS2P54868 508 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 FKBP1AP62942 108 aaKnown RBP14.72□□□□□ -0.05
TOP3B-213ENST00000457179 KCNA1Q09470 495 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 AGAP11Q8TF27 550 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 UBLCP1Q8WVY7 318 aaPredicted RBP14.72□□□□□ -0.05
TOP3B-213ENST00000457179 MTMR8Q96EF0 704 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 ZNF570Q96NI8 536 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 MAGEF1Q9HAY2 307 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 GGT7Q9UJ14 662 aa14.72□□□□□ -0.05
TOP3B-213ENST00000457179 PACSIN2Q9UNF0 486 aaPredicted RBP14.72□□□□□ -0.05
TOP3B-213ENST00000457179 TMEM150BA6NC51 233 aa14.71□□□□□ -0.05
TOP3B-213ENST00000457179 CLIC2O15247 247 aa14.71□□□□□ -0.05
TOP3B-213ENST00000457179 CASP5P51878 434 aa14.71□□□□□ -0.05
TOP3B-213ENST00000457179 RWDD2BP57060 319 aa14.71□□□□□ -0.05
TOP3B-213ENST00000457179 PDIA5Q14554 519 aa14.71□□□□□ -0.05
TOP3B-213ENST00000457179 TNIP1Q15025 636 aa14.71□□□□□ -0.05
TOP3B-213ENST00000457179 MEA1Q16626 185 aa14.71□□□□□ -0.05
TOP3B-213ENST00000457179 CFAP221Q4G0U5 840 aa14.71□□□□□ -0.05
TOP3B-213ENST00000457179 MYOCDQ8IZQ8 938 aa14.71□□□□□ -0.05
TOP3B-213ENST00000457179 AGBL3Q8NEM8 1001 aa14.71□□□□□ -0.05
TOP3B-213ENST00000457179 CCT6BQ92526 530 aa14.71□□□□□ -0.05
TOP3B-213ENST00000457179 BATF3Q9NR55 127 aa14.71□□□□□ -0.05
TOP3B-213ENST00000457179 STK17AQ9UEE5 414 aa14.71□□□□□ -0.05
TOP3B-213ENST00000457179 SH3BP1Q9Y3L3 701 aa14.71□□□□□ -0.05
TOP3B-213ENST00000457179 TESPA1A2RU30 521 aaPredicted RBP14.71□□□□□ -0.06
TOP3B-213ENST00000457179 PSMD2Q13200 908 aa14.71□□□□□ -0.06
TOP3B-213ENST00000457179 GNPTABQ3T906 1256 aa14.71□□□□□ -0.06
TOP3B-213ENST00000457179 CCDC170Q8IYT3 715 aa14.71□□□□□ -0.06
TOP3B-213ENST00000457179 RUBCNQ92622 972 aa14.71□□□□□ -0.06
TOP3B-213ENST00000457179 TSG101Q99816 390 aa14.71□□□□□ -0.06
TOP3B-213ENST00000457179 PLCD4Q9BRC7 762 aa14.71□□□□□ -0.06
TOP3B-213ENST00000457179 MTFR1LQ9H019 292 aa14.71□□□□□ -0.06
TOP3B-213ENST00000457179 GDF3Q9NR23 364 aa14.71□□□□□ -0.06
TOP3B-213ENST00000457179 SALL4Q9UJQ4 1053 aa14.71□□□□□ -0.06
TOP3B-213ENST00000457179 FTCDO95954 541 aa14.7□□□□□ -0.06
TOP3B-213ENST00000457179 EPS15P42566 896 aa14.7□□□□□ -0.06
TOP3B-213ENST00000457179 PRELPP51888 382 aa14.7□□□□□ -0.06
TOP3B-213ENST00000457179 MAN2A1Q16706 1144 aa14.7□□□□□ -0.06
TOP3B-213ENST00000457179 MIS18BP1Q6P0N0 1132 aa14.7□□□□□ -0.06
TOP3B-213ENST00000457179 DDX42Q86XP3 938 aaKnown RBP eCLIP14.7□□□□□ -0.06
TOP3B-213ENST00000457179 SLC16A10Q8TF71 515 aa14.7□□□□□ -0.06
TOP3B-213ENST00000457179 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.7□□□□□ -0.06
TOP3B-213ENST00000457179 WDR18Q9BV38 432 aa14.7□□□□□ -0.06
TOP3B-213ENST00000457179 TCEAL9Q9UHQ7 104 aa14.7□□□□□ -0.06
TOP3B-213ENST00000457179 SLC12A6Q9UHW9 1150 aa14.7□□□□□ -0.06
TOP3B-213ENST00000457179 HSD17B3P37058 310 aa14.7□□□□□ -0.06
TOP3B-213ENST00000457179 USP11P51784 963 aa14.7□□□□□ -0.06
TOP3B-213ENST00000457179 POLR2FP61218 127 aaKnown RBP14.7□□□□□ -0.06
TOP3B-213ENST00000457179 MAGOHP61326 146 aaKnown RBP14.7□□□□□ -0.06
TOP3B-213ENST00000457179 ITIH3Q06033 890 aa14.7□□□□□ -0.06
TOP3B-213ENST00000457179 PPP1R18Q6NYC8 613 aa14.7□□□□□ -0.06
TOP3B-213ENST00000457179 IL31RAQ8NI17 732 aa14.7□□□□□ -0.06
TOP3B-213ENST00000457179 PRCCQ92733 491 aaPredicted RBP14.7□□□□□ -0.06
TOP3B-213ENST00000457179 MAGOHBQ96A72 148 aaKnown RBP14.7□□□□□ -0.06
TOP3B-213ENST00000457179 DYDC2Q96IM9 177 aa14.7□□□□□ -0.06
TOP3B-213ENST00000457179 ERGIC2Q96RQ1 377 aa14.7□□□□□ -0.06
TOP3B-213ENST00000457179 ZNF577Q9BSK1 485 aa14.7□□□□□ -0.06
TOP3B-213ENST00000457179 EBF2Q9HAK2 575 aa14.7□□□□□ -0.06
TOP3B-213ENST00000457179 DNAJC8O75937 253 aaPredicted RBP14.69□□□□□ -0.06
TOP3B-213ENST00000457179 GCNT3O95395 438 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 DCAF17Q5H9S7 520 aaPredicted RBP14.69□□□□□ -0.06
TOP3B-213ENST00000457179 GUF1Q8N442 669 aaKnown RBP14.69□□□□□ -0.06
TOP3B-213ENST00000457179 TRPM4Q8TD43 1214 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 LSM14BQ9BX40 385 aaKnown RBP14.69□□□□□ -0.06
TOP3B-213ENST00000457179 TLR10Q9BXR5 811 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 WDR11Q9BZH6 1224 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 GGA3Q9NZ52 723 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 SIK3Q9Y2K2 1263 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 MAGEA1P43355 309 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 PPP2R2AP63151 447 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 TRIM68Q6AZZ1 485 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 LRRC55Q6ZSA7 311 aa14.69□□□□□ -0.06
TOP3B-213ENST00000457179 ILDR2Q71H61 639 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms