RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 PWWP2AQ96N64 755 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 NEK1Q96PY6 1258 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 CENPOQ9BU64 300 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 MRPL9Q9BYD2 267 aaKnown RBP6.12□□□□□ -1.43
VPS41-209ENST00000457055 VPS33BQ9H267 617 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 IRAK4Q9NWZ3 460 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 FBXO10Q9UK96 956 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 PA2G4Q9UQ80 394 aaKnown RBP6.12□□□□□ -1.43
VPS41-209ENST00000457055 AFG3L2Q9Y4W6 797 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 PCDHA5Q9Y5H7 936 aa6.12□□□□□ -1.43
VPS41-209ENST00000457055 C9IYK1 514 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 PIP5K1CO60331 668 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 F2P00734 622 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 GSTM1P09488 218 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 GLULP15104 373 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 KCNA6P17658 529 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 CTNNA1P35221 906 aaKnown RBP6.11□□□□□ -1.43
VPS41-209ENST00000457055 ZBTB17Q13105 803 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 PICALMQ13492 652 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 CBX2Q14781 532 aaPredicted RBP6.11□□□□□ -1.43
VPS41-209ENST00000457055 ZSCAN26Q16670 478 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 CDCA2Q69YH5 1023 aaPredicted RBP6.11□□□□□ -1.43
VPS41-209ENST00000457055 CWF19L1Q69YN2 538 aaKnown RBP6.11□□□□□ -1.43
VPS41-209ENST00000457055 CCDC129Q6ZRS4 1044 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 KRT26Q7Z3Y9 468 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 MORC1Q86VD1 984 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 DZIP1Q86YF9 867 aaKnown RBP6.11□□□□□ -1.43
VPS41-209ENST00000457055 ANKRD18AQ8IVF6 992 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 LINC01356Q8N9X3 169 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 FAM184AQ8NB25 1140 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 SYT8Q8NBV8 401 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.11□□□□□ -1.43
VPS41-209ENST00000457055 HVCN1Q96D96 273 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 RSRC1Q96IZ7 334 aaKnown RBP6.11□□□□□ -1.43
VPS41-209ENST00000457055 TCHPQ9BT92 498 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 MMTAG2Q9BU76 263 aaKnown RBP6.11□□□□□ -1.43
VPS41-209ENST00000457055 TRIM8Q9BZR9 551 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 OSBPL5Q9H0X9 879 aaPredicted RBP6.11□□□□□ -1.43
VPS41-209ENST00000457055 UNC45AQ9H3U1 944 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 PLEKHA5Q9HAU0 1116 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 CYP4F11Q9HBI6 524 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 LUC7LQ9NQ29 371 aaKnown RBP6.11□□□□□ -1.43
VPS41-209ENST00000457055 MRGBPQ9NV56 204 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 KCTD5Q9NXV2 234 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 SEPT10Q9P0V9 454 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 PNMA8BQ9ULN7 279 aaPredicted RBP6.11□□□□□ -1.43
VPS41-209ENST00000457055 TTLL3Q9Y4R7 772 aa6.11□□□□□ -1.43
VPS41-209ENST00000457055 RAPGEF6Q8TEU7 1601 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 GOLGA3Q08378 1498 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 ESYT3A0FGR9 886 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 K7ENM7 598 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 STXBP3O00186 592 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 SHOXO15266 292 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 NBNO60934 754 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 SKAP2O75563 359 aaPredicted RBP6.1□□□□□ -1.43
VPS41-209ENST00000457055 RASGRP1O95267 797 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 BAG2O95816 211 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 TSPY4P0CV99 314 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 TSPY10P0CW01 314 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 ACRP10323 421 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 HSPA5P11021 654 aaKnown RBP6.1□□□□□ -1.43
VPS41-209ENST00000457055 MAPKAPK2P49137 400 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 GTF2A1P52655 376 aaPredicted RBP6.1□□□□□ -1.43
VPS41-209ENST00000457055 HSD17B7P56937 341 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 ZNF200P98182 395 aaPredicted RBP6.1□□□□□ -1.43
VPS41-209ENST00000457055 MCL1Q07820 350 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 PPP2R5CQ13362 524 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 NR1I3Q14994 352 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 TAF7Q15545 349 aaPredicted RBP6.1□□□□□ -1.43
VPS41-209ENST00000457055 SKOR2Q2VWA4 1001 aaPredicted RBP6.1□□□□□ -1.43
VPS41-209ENST00000457055 SLC10A5Q5PT55 438 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 DACT2Q5SW24 774 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 TDRD10Q5VZ19 366 aaKnown RBP6.1□□□□□ -1.43
VPS41-209ENST00000457055 HLA-DQA1Q5Y7H0 255 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 IL31Q6EBC2 164 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 FAAH2Q6GMR7 532 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 ZC3H14Q6PJT7 736 aaKnown RBP6.1□□□□□ -1.43
VPS41-209ENST00000457055 BRSK1Q8TDC3 778 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 ANKRD49Q8WVL7 239 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 RTF1Q92541 710 aaKnown RBP6.1□□□□□ -1.43
VPS41-209ENST00000457055 CEP95Q96GE4 821 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 TBATAQ96M53 351 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 MOGAT1Q96PD6 335 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 DEPDC7Q96QD5 511 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 BAG1Q99933 345 aaPredicted RBP6.1□□□□□ -1.43
VPS41-209ENST00000457055 SLC39A3Q9BRY0 314 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 SPON2Q9BUD6 331 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 SLC12A9Q9BXP2 914 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 CCDC113Q9H0I3 377 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 VEZTQ9HBM0 779 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 QPCTLQ9NXS2 382 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 SNTG2Q9NY99 539 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 ZIM2Q9NZV7 527 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 CTNNA3Q9UI47 895 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 IPPQ9Y573 584 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 PCDHGB7Q9Y5F8 929 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 MROH2AA6NES4 1674 aa6.1□□□□□ -1.43
VPS41-209ENST00000457055 NPATQ14207 1427 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 GPRASP1Q5JY77 1395 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 C2orf81A6NN90 581 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms