RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 TRIM49P0CI25 452 aa20■□□□□ 0.79
SEMA3B-209ENST00000456560 TRIM49CP0CI26 452 aa20■□□□□ 0.79
SEMA3B-209ENST00000456560 NPEPPSP55786 919 aa20■□□□□ 0.79
SEMA3B-209ENST00000456560 MRPS9P82933 396 aaKnown RBP20■□□□□ 0.79
SEMA3B-209ENST00000456560 NNTQ13423 1086 aa20■□□□□ 0.79
SEMA3B-209ENST00000456560 U2AF1L4Q8WU68 220 aaKnown RBP20■□□□□ 0.79
SEMA3B-209ENST00000456560 GOLGA6BA6NDN3 693 aa19.99■□□□□ 0.79
SEMA3B-209ENST00000456560 BFSP1Q12934 665 aa19.99■□□□□ 0.79
SEMA3B-209ENST00000456560 TNIP1Q15025 636 aa19.99■□□□□ 0.79
SEMA3B-209ENST00000456560 SYCP3Q8IZU3 236 aa19.99■□□□□ 0.79
SEMA3B-209ENST00000456560 LMO3Q8TAP4 145 aa19.99■□□□□ 0.79
SEMA3B-209ENST00000456560 SYTL5Q8TDW5 730 aaPredicted RBP19.99■□□□□ 0.79
SEMA3B-209ENST00000456560 LPAR1Q92633 364 aa19.99■□□□□ 0.79
SEMA3B-209ENST00000456560 KIAA1683Q9H0B3 1180 aa19.99■□□□□ 0.79
SEMA3B-209ENST00000456560 KCNK3O14649 394 aa19.99■□□□□ 0.79
SEMA3B-209ENST00000456560 EXOC3O60645 756 aa19.99■□□□□ 0.79
SEMA3B-209ENST00000456560 RASA3Q14644 834 aa19.99■□□□□ 0.79
SEMA3B-209ENST00000456560 ACTRT1Q8TDG2 376 aa19.99■□□□□ 0.79
SEMA3B-209ENST00000456560 AFAP1L1Q8TED9 768 aa19.99■□□□□ 0.79
SEMA3B-209ENST00000456560 TEPSINQ96N21 525 aa19.99■□□□□ 0.79
SEMA3B-209ENST00000456560 KRT12Q99456 494 aa19.99■□□□□ 0.79
SEMA3B-209ENST00000456560 GOLPH3Q9H4A6 298 aa19.99■□□□□ 0.79
SEMA3B-209ENST00000456560 SLC38A10Q9HBR0 1119 aa19.99■□□□□ 0.79
SEMA3B-209ENST00000456560 MYOZ2Q9NPC6 264 aa19.99■□□□□ 0.79
SEMA3B-209ENST00000456560 MAP3K20Q9NYL2 800 aaKnown RBP19.99■□□□□ 0.79
SEMA3B-209ENST00000456560 K7ENM7 598 aa19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 HEXIM1O94992 359 aaKnown RBP19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 LMNB1P20700 586 aa19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 MYL7Q01449 175 aa19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 ALCAMQ13740 583 aa19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 LRRC31Q6UY01 552 aa19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 TSEN2Q8NCE0 465 aaKnown RBP19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 SCFD2Q8WU76 684 aa19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 LMBR1Q8WVP7 490 aa19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 SH3GL2Q99962 352 aa19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 LARSQ9P2J5 1176 aaKnown RBP19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 APEX2Q9UBZ4 518 aa19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 ALAS1P13196 640 aa19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 CARSP49589 748 aaKnown RBP19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 RARRES1P49788 294 aa19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 GALCP54803 685 aa19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 C12orf56Q8IXR9 622 aa19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 SAMD3Q8N6K7 520 aa19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 TMEM206Q9H813 350 aa19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 RAVER2Q9HCJ3 691 aaKnown RBP19.98■□□□□ 0.79
SEMA3B-209ENST00000456560 QARSP47897 775 aaKnown RBP19.97■□□□□ 0.79
SEMA3B-209ENST00000456560 RNASE9P60153 205 aaKnown RBP19.97■□□□□ 0.79
SEMA3B-209ENST00000456560 SPP2Q13103 211 aa19.97■□□□□ 0.79
SEMA3B-209ENST00000456560 PLS1Q14651 629 aa19.97■□□□□ 0.79
SEMA3B-209ENST00000456560 ALS2CLQ60I27 953 aa19.97■□□□□ 0.79
SEMA3B-209ENST00000456560 CPXCR1Q8N123 301 aa19.97■□□□□ 0.79
SEMA3B-209ENST00000456560 FHDC1Q9C0D6 1143 aaPredicted RBP19.97■□□□□ 0.79
SEMA3B-209ENST00000456560 EPB41L5Q9HCM4 733 aa19.97■□□□□ 0.79
SEMA3B-209ENST00000456560 SUCLA2Q9P2R7 463 aaPredicted RBP19.97■□□□□ 0.79
SEMA3B-209ENST00000456560 SCAF8Q9UPN6 1271 aaKnown RBP19.97■□□□□ 0.79
SEMA3B-209ENST00000456560 NCANO14594 1321 aa19.97■□□□□ 0.79
SEMA3B-209ENST00000456560 FER1L6Q2WGJ9 1857 aa19.97■□□□□ 0.79
SEMA3B-209ENST00000456560 PLS3P13797 630 aa19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 TNNC1P63316 161 aa19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 GUCY2DQ02846 1103 aa19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 PHLDB3Q6NSJ2 640 aa19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 MAEAQ7L5Y9 396 aa19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 FMNL3Q8IVF7 1028 aa19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 GLYCTKQ8IVS8 523 aa19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 METTL13Q8N6R0 699 aa19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 ACCSQ96QU6 501 aa19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 TAAR1Q96RJ0 339 aa19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 TBC1D22BQ9NU19 505 aa19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 ZSCAN5CA6NGD5 496 aaPredicted RBP19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 CLSTN1O94985 981 aa19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 PAK2Q13177 524 aa19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 KIF22Q14807 665 aa19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 CIAPIN1Q6FI81 312 aa19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 NT5DC3Q86UY8 548 aa19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 CASKIN2Q8WXE0 1202 aa19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 ST6GALNAC4Q9H4F1 302 aa19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 GINM1Q9NU53 330 aa19.96■□□□□ 0.79
SEMA3B-209ENST00000456560 RAD51CO43502 376 aa19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 TMEM253P0C7T8 217 aa19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 RFX1P22670 979 aa19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 DGKZQ13574 1117 aa19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 MTMR1Q13613 665 aa19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 INTS8Q75QN2 995 aaKnown RBP19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 PEX26Q7Z412 305 aa19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 SYCE1Q8N0S2 351 aa19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 RDH13Q8NBN7 331 aa19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 NFU1Q9UMS0 254 aa19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 BRCA1P38398 1863 aaKnown RBP19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 TISP43B9A030 160 aa19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 CEP104O60308 925 aa19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 CCDC172P0C7W6 258 aa19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 KRT13P13646 458 aa19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 DLG4P78352 724 aa19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 PGM5Q15124 567 aa19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 RASGEF1CQ8N431 466 aa19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 PCIF1Q9H4Z3 704 aa19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 PPP1R9AQ9ULJ8 1098 aa19.95■□□□□ 0.78
SEMA3B-209ENST00000456560 ESYT3A0FGR9 886 aa19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 BHMG1C9JSJ3 638 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms