RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 ASAP2O43150 1006 aa19.95■□□□□ 0.78
MSH6-207ENST00000456246 SLITRK3O94933 977 aa19.95■□□□□ 0.78
MSH6-207ENST00000456246 LAG3P18627 525 aa19.95■□□□□ 0.78
MSH6-207ENST00000456246 TXKP42681 527 aa19.95■□□□□ 0.78
MSH6-207ENST00000456246 TRAPPC10P48553 1259 aa19.95■□□□□ 0.78
MSH6-207ENST00000456246 GATMP50440 423 aa19.95■□□□□ 0.78
MSH6-207ENST00000456246 GNL2Q13823 731 aaKnown RBP19.95■□□□□ 0.78
MSH6-207ENST00000456246 CTTNQ14247 550 aaKnown RBP19.95■□□□□ 0.78
MSH6-207ENST00000456246 PUS10Q3MIT2 529 aaKnown RBP19.95■□□□□ 0.78
MSH6-207ENST00000456246 LEXMQ3ZCV2 418 aa19.95■□□□□ 0.78
MSH6-207ENST00000456246 XKR9Q5GH70 373 aa19.95■□□□□ 0.78
MSH6-207ENST00000456246 FAM102BQ5T8I3 360 aa19.95■□□□□ 0.78
MSH6-207ENST00000456246 TPH2Q8IWU9 490 aa19.95■□□□□ 0.78
MSH6-207ENST00000456246 LRRC43Q8N309 656 aa19.95■□□□□ 0.78
MSH6-207ENST00000456246 NLRP4Q96MN2 994 aa19.95■□□□□ 0.78
MSH6-207ENST00000456246 HSD17B14Q9BPX1 270 aa19.95■□□□□ 0.78
MSH6-207ENST00000456246 ANKEF1Q9NU02 776 aa19.95■□□□□ 0.78
MSH6-207ENST00000456246 MYO7AQ13402 2215 aa19.95■□□□□ 0.78
MSH6-207ENST00000456246 ITGB1P05556 798 aa19.94■□□□□ 0.78
MSH6-207ENST00000456246 FGFR1P11362 822 aa19.94■□□□□ 0.78
MSH6-207ENST00000456246 KCNA5P22460 613 aa19.94■□□□□ 0.78
MSH6-207ENST00000456246 EMC2Q15006 297 aa19.94■□□□□ 0.78
MSH6-207ENST00000456246 SRGAP1Q7Z6B7 1085 aa19.94■□□□□ 0.78
MSH6-207ENST00000456246 KLHL23Q8NBE8 558 aa19.94■□□□□ 0.78
MSH6-207ENST00000456246 CCDC43Q96MW1 224 aaKnown RBP19.94■□□□□ 0.78
MSH6-207ENST00000456246 MTRQ99707 1265 aa19.94■□□□□ 0.78
MSH6-207ENST00000456246 ALG13Q9NP73 1137 aaKnown RBP19.94■□□□□ 0.78
MSH6-207ENST00000456246 NOL7Q9UMY1 257 aaKnown RBP19.94■□□□□ 0.78
MSH6-207ENST00000456246 ARID2Q68CP9 1835 aa19.94■□□□□ 0.78
MSH6-207ENST00000456246 CARNS1A5YM72 827 aa19.93■□□□□ 0.78
MSH6-207ENST00000456246 XRCC6P12956 609 aaKnown RBP eCLIP19.93■□□□□ 0.782e-10■■□□□ 12.2
MSH6-207ENST00000456246 MCM7P33993 719 aa19.93■□□□□ 0.78
MSH6-207ENST00000456246 RAB27AP51159 221 aa19.93■□□□□ 0.78
MSH6-207ENST00000456246 MXD4Q14582 209 aaPredicted RBP19.93■□□□□ 0.78
MSH6-207ENST00000456246 PCBP1Q15365 356 aaKnown RBP eCLIP19.93■□□□□ 0.78
MSH6-207ENST00000456246 CATSPER4Q7RTX7 472 aa19.93■□□□□ 0.78
MSH6-207ENST00000456246 NOSTRINQ8IVI9 506 aa19.93■□□□□ 0.78
MSH6-207ENST00000456246 SPPL3Q8TCT6 385 aa19.93■□□□□ 0.78
MSH6-207ENST00000456246 MRPL9Q9BYD2 267 aaKnown RBP19.93■□□□□ 0.78
MSH6-207ENST00000456246 TYW1Q9NV66 732 aaKnown RBP19.93■□□□□ 0.78
MSH6-207ENST00000456246 BDP1A6H8Y1 2624 aa19.93■□□□□ 0.78
MSH6-207ENST00000456246 FSD2A1L4K1 749 aa19.92■□□□□ 0.78
MSH6-207ENST00000456246 WNT7AO00755 349 aa19.92■□□□□ 0.78
MSH6-207ENST00000456246 DGAT1O75907 488 aa19.92■□□□□ 0.78
MSH6-207ENST00000456246 OR52Z1P0C646 297 aa19.92■□□□□ 0.78
MSH6-207ENST00000456246 ATP2B1P20020 1258 aa19.92■□□□□ 0.78
MSH6-207ENST00000456246 FGFR4P22455 802 aa19.92■□□□□ 0.78
MSH6-207ENST00000456246 PPM1AP35813 382 aa19.92■□□□□ 0.78
MSH6-207ENST00000456246 MCM2P49736 904 aa19.92■□□□□ 0.78
MSH6-207ENST00000456246 LAMTOR4Q0VGL1 99 aa19.92■□□□□ 0.78
MSH6-207ENST00000456246 TWF2Q6IBS0 349 aaKnown RBP19.92■□□□□ 0.78
MSH6-207ENST00000456246 PDE12Q6L8Q7 609 aaKnown RBP19.92■□□□□ 0.78
MSH6-207ENST00000456246 ZNF598Q86UK7 904 aaKnown RBP19.92■□□□□ 0.78
MSH6-207ENST00000456246 ZNF579Q8NAF0 562 aaKnown RBP19.92■□□□□ 0.78
MSH6-207ENST00000456246 COLGALT1Q8NBJ5 622 aa19.92■□□□□ 0.78
MSH6-207ENST00000456246 ERMNQ8TAM6 284 aa19.92■□□□□ 0.78
MSH6-207ENST00000456246 POF1BQ8WVV4 589 aa19.92■□□□□ 0.78
MSH6-207ENST00000456246 PRPF31Q8WWY3 499 aaKnown RBP19.92■□□□□ 0.78
MSH6-207ENST00000456246 CASD1Q96PB1 797 aa19.92■□□□□ 0.78
MSH6-207ENST00000456246 TMEM60Q9H2L4 133 aa19.92■□□□□ 0.78
MSH6-207ENST00000456246 IFT122Q9HBG6 1241 aa19.92■□□□□ 0.78
MSH6-207ENST00000456246 TUFT1Q9NNX1 390 aa19.92■□□□□ 0.78
MSH6-207ENST00000456246 AGPAT5Q9NUQ2 364 aa19.92■□□□□ 0.78
MSH6-207ENST00000456246 PIN4Q9Y237 131 aaKnown RBP19.92■□□□□ 0.78
MSH6-207ENST00000456246 FAM50BQ9Y247 325 aa19.92■□□□□ 0.78
MSH6-207ENST00000456246 MUC3AQ02505 3323 aa19.92■□□□□ 0.78
MSH6-207ENST00000456246 TCF20Q9UGU0 1960 aaKnown RBP19.92■□□□□ 0.78
MSH6-207ENST00000456246 CSDE1O75534 798 aaKnown RBP19.91■□□□□ 0.78
MSH6-207ENST00000456246 PHKA2P46019 1235 aa19.91■□□□□ 0.78
MSH6-207ENST00000456246 TFDP1Q14186 410 aa19.91■□□□□ 0.78
MSH6-207ENST00000456246 FERMT3Q86UX7 667 aa19.91■□□□□ 0.78
MSH6-207ENST00000456246 KSR1Q8IVT5 923 aa19.91■□□□□ 0.78
MSH6-207ENST00000456246 THNSL1Q8IYQ7 743 aa19.91■□□□□ 0.78
MSH6-207ENST00000456246 TMEM143Q96AN5 459 aa19.91■□□□□ 0.78
MSH6-207ENST00000456246 CWH43Q9H720 699 aa19.91■□□□□ 0.78
MSH6-207ENST00000456246 RNF19AQ9NV58 838 aa19.91■□□□□ 0.78
MSH6-207ENST00000456246 LZTS1Q9Y250 596 aa19.91■□□□□ 0.78
MSH6-207ENST00000456246 ATG2AQ2TAZ0 1938 aa19.91■□□□□ 0.78
MSH6-207ENST00000456246 POTEMA6NI47 508 aa19.9■□□□□ 0.78
MSH6-207ENST00000456246 ZNF623O75123 536 aa19.9■□□□□ 0.78
MSH6-207ENST00000456246 FGF18O76093 207 aa19.9■□□□□ 0.78
MSH6-207ENST00000456246 U2AF2P26368 475 aaKnown RBP eCLIP19.9■□□□□ 0.782e-9■■■■■ 28.4
MSH6-207ENST00000456246 CAMK1Q14012 370 aa19.9■□□□□ 0.78
MSH6-207ENST00000456246 TTC38Q5R3I4 469 aa19.9■□□□□ 0.78
MSH6-207ENST00000456246 RNF149Q8NC42 400 aa19.9■□□□□ 0.78
MSH6-207ENST00000456246 RNF169Q8NCN4 708 aa19.9■□□□□ 0.78
MSH6-207ENST00000456246 ZNF558Q96NG5 402 aa19.9■□□□□ 0.78
MSH6-207ENST00000456246 FAM105AQ9NUU6 356 aa19.9■□□□□ 0.78
MSH6-207ENST00000456246 CLDND1Q9NY35 253 aa19.9■□□□□ 0.78
MSH6-207ENST00000456246 PUF60Q9UHX1 559 aaKnown RBP19.9■□□□□ 0.78
MSH6-207ENST00000456246 SRGAP2CP0DJJ0 459 aa19.89■□□□□ 0.77
MSH6-207ENST00000456246 ATF7P17544 494 aaPredicted RBP19.89■□□□□ 0.77
MSH6-207ENST00000456246 MUTP22033 750 aa19.89■□□□□ 0.77
MSH6-207ENST00000456246 DNAJB1P25685 340 aa19.89■□□□□ 0.77
MSH6-207ENST00000456246 RARRES1P49788 294 aa19.89■□□□□ 0.77
MSH6-207ENST00000456246 PLCB3Q01970 1234 aa19.89■□□□□ 0.77
MSH6-207ENST00000456246 POU5F1BQ06416 359 aa19.89■□□□□ 0.77
MSH6-207ENST00000456246 HYAL1Q12794 435 aa19.89■□□□□ 0.77
MSH6-207ENST00000456246 CTC1Q2NKJ3 1217 aa19.89■□□□□ 0.77
MSH6-207ENST00000456246 CLLU1OSQ5K130 101 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms