RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 MTRQ99707 1265 aa19.32■□□□□ 0.68
USP39-208ENST00000455732 ADAM2Q99965 735 aa19.32■□□□□ 0.68
USP39-208ENST00000455732 ATP6V0A4Q9HBG4 840 aa19.32■□□□□ 0.68
USP39-208ENST00000455732 XPNPEP1Q9NQW7 623 aa19.32■□□□□ 0.68
USP39-208ENST00000455732 C1orf112Q9NSG2 853 aa19.32■□□□□ 0.68
USP39-208ENST00000455732 LRWD1Q9UFC0 647 aa19.32■□□□□ 0.68
USP39-208ENST00000455732 COL4A3BPQ9Y5P4 624 aa19.32■□□□□ 0.68
USP39-208ENST00000455732 C9IYK1 514 aa19.31■□□□□ 0.68
USP39-208ENST00000455732 H3BNC9 293 aa19.31■□□□□ 0.68
USP39-208ENST00000455732 BMP15O95972 392 aa19.31■□□□□ 0.68
USP39-208ENST00000455732 STAG3L1P0CL83 205 aa19.31■□□□□ 0.68
USP39-208ENST00000455732 BTG3Q14201 252 aaPredicted RBP19.31■□□□□ 0.68
USP39-208ENST00000455732 IL17AQ16552 155 aa19.31■□□□□ 0.68
USP39-208ENST00000455732 ARL6IP4Q66PJ3 421 aaKnown RBP19.31■□□□□ 0.68
USP39-208ENST00000455732 POTEGQ6S5H5 508 aa19.31■□□□□ 0.68
USP39-208ENST00000455732 DTHD1Q6ZMT9 781 aa19.31■□□□□ 0.68
USP39-208ENST00000455732 SLC24A5Q71RS6 500 aa19.31■□□□□ 0.68
USP39-208ENST00000455732 ZNF668Q96K58 619 aaPredicted RBP19.31■□□□□ 0.68
USP39-208ENST00000455732 CCDC43Q96MW1 224 aaKnown RBP19.31■□□□□ 0.68
USP39-208ENST00000455732 INO80BQ9C086 356 aaPredicted RBP19.31■□□□□ 0.68
USP39-208ENST00000455732 RNF216Q9NWF9 866 aaPredicted RBP19.31■□□□□ 0.68
USP39-208ENST00000455732 TCF20Q9UGU0 1960 aaKnown RBP19.31■□□□□ 0.68
USP39-208ENST00000455732 A0A087WZ62 844 aa19.3■□□□□ 0.68
USP39-208ENST00000455732 DENND3A2RUS2 1198 aa19.3■□□□□ 0.68
USP39-208ENST00000455732 C5orf67F2Z3F1 127 aa19.3■□□□□ 0.68
USP39-208ENST00000455732 ASAP2O43150 1006 aa19.3■□□□□ 0.68
USP39-208ENST00000455732 CCT6AP40227 531 aaKnown RBP19.3■□□□□ 0.68
USP39-208ENST00000455732 FAM189BP81408 668 aa19.3■□□□□ 0.68
USP39-208ENST00000455732 FERMT3Q86UX7 667 aa19.3■□□□□ 0.68
USP39-208ENST00000455732 CMTR2Q8IYT2 770 aaKnown RBP19.3■□□□□ 0.68
USP39-208ENST00000455732 PRPF31Q8WWY3 499 aaKnown RBP19.3■□□□□ 0.68
USP39-208ENST00000455732 TMEM143Q96AN5 459 aa19.3■□□□□ 0.68
USP39-208ENST00000455732 FDXACB1Q9BRP7 624 aaPredicted RBP19.3■□□□□ 0.68
USP39-208ENST00000455732 IFT122Q9HBG6 1241 aa19.3■□□□□ 0.68
USP39-208ENST00000455732 SFPQP23246 707 aaKnown RBP eCLIP19.29■□□□□ 0.68
USP39-208ENST00000455732 BMPR1AP36894 532 aa19.29■□□□□ 0.68
USP39-208ENST00000455732 LAMTOR4Q0VGL1 99 aa19.29■□□□□ 0.68
USP39-208ENST00000455732 RESTQ13127 1097 aa19.29■□□□□ 0.68
USP39-208ENST00000455732 GPM6BQ13491 265 aa19.29■□□□□ 0.68
USP39-208ENST00000455732 MXD4Q14582 209 aaPredicted RBP19.29■□□□□ 0.68
USP39-208ENST00000455732 KSR1Q8IVT5 923 aa19.29■□□□□ 0.68
USP39-208ENST00000455732 SNX29Q8TEQ0 813 aa19.29■□□□□ 0.68
USP39-208ENST00000455732 NLRP4Q96MN2 994 aa19.29■□□□□ 0.68
USP39-208ENST00000455732 BMP2KQ9NSY1 1161 aaPredicted RBP19.29■□□□□ 0.68
USP39-208ENST00000455732 MTMR6Q9Y217 621 aa19.29■□□□□ 0.68
USP39-208ENST00000455732 RWDD3Q9Y3V2 267 aa19.29■□□□□ 0.68
USP39-208ENST00000455732 PLXNA4Q9HCM2 1894 aa19.28■□□□□ 0.68
USP39-208ENST00000455732 RB1P06400 928 aa19.28■□□□□ 0.68
USP39-208ENST00000455732 CTNNB1P35222 781 aa19.28■□□□□ 0.68
USP39-208ENST00000455732 ARL2P36404 184 aa19.28■□□□□ 0.68
USP39-208ENST00000455732 GATMP50440 423 aa19.28■□□□□ 0.68
USP39-208ENST00000455732 ECM1Q16610 540 aa19.28■□□□□ 0.68
USP39-208ENST00000455732 KRT79Q5XKE5 535 aa19.28■□□□□ 0.68
USP39-208ENST00000455732 SRGAP1Q7Z6B7 1085 aa19.28■□□□□ 0.68
USP39-208ENST00000455732 MCPH1Q8NEM0 835 aa19.28■□□□□ 0.68
USP39-208ENST00000455732 MRPL38Q96DV4 380 aaKnown RBP19.28■□□□□ 0.68
USP39-208ENST00000455732 ELAC1Q9H777 363 aaKnown RBP19.28■□□□□ 0.68
USP39-208ENST00000455732 CHST12Q9NRB3 414 aa19.28■□□□□ 0.68
USP39-208ENST00000455732 FOXD4L1Q9NU39 408 aa19.28■□□□□ 0.68
USP39-208ENST00000455732 LRFN2Q9ULH4 789 aa19.28■□□□□ 0.68
USP39-208ENST00000455732 PCDHB7Q9Y5E2 793 aa19.28■□□□□ 0.68
USP39-208ENST00000455732 MRPL42Q9Y6G3 142 aaKnown RBP19.28■□□□□ 0.68
USP39-208ENST00000455732 PP2D1A8MPX8 630 aa19.27■□□□□ 0.68
USP39-208ENST00000455732 TNFRSF10AO00220 468 aa19.27■□□□□ 0.68
USP39-208ENST00000455732 STX6O43752 255 aa19.27■□□□□ 0.68
USP39-208ENST00000455732 USO1O60763 962 aaKnown RBP19.27■□□□□ 0.68
USP39-208ENST00000455732 CSDE1O75534 798 aaKnown RBP19.27■□□□□ 0.68
USP39-208ENST00000455732 ZSCAN20P17040 1043 aaPredicted RBP19.27■□□□□ 0.68
USP39-208ENST00000455732 MRPS5P82675 430 aaKnown RBP19.27■□□□□ 0.68
USP39-208ENST00000455732 POU5F1BQ06416 359 aa19.27■□□□□ 0.68
USP39-208ENST00000455732 IFNLR1Q8IU57 520 aaPredicted RBP19.27■□□□□ 0.68
USP39-208ENST00000455732 ASB2Q96Q27 587 aa19.27■□□□□ 0.68
USP39-208ENST00000455732 MMTAG2Q9BU76 263 aaKnown RBP19.27■□□□□ 0.68
USP39-208ENST00000455732 TRAIPQ9BWF2 469 aa19.27■□□□□ 0.68
USP39-208ENST00000455732 TMEM161AQ9NX61 479 aa19.27■□□□□ 0.68
USP39-208ENST00000455732 A0A087WWV3 80 aa19.26■□□□□ 0.67
USP39-208ENST00000455732 ARHGEF35A5YM69 484 aa19.26■□□□□ 0.67
USP39-208ENST00000455732 PDIA4P13667 645 aaKnown RBP19.26■□□□□ 0.67
USP39-208ENST00000455732 FGFR4P22455 802 aa19.26■□□□□ 0.67
USP39-208ENST00000455732 PHKA2P46019 1235 aa19.26■□□□□ 0.67
USP39-208ENST00000455732 TFF2Q03403 129 aa19.26■□□□□ 0.67
USP39-208ENST00000455732 TFDP1Q14186 410 aa19.26■□□□□ 0.67
USP39-208ENST00000455732 PCBP1Q15365 356 aaKnown RBP eCLIP19.26■□□□□ 0.67
USP39-208ENST00000455732 SKIV2LQ15477 1246 aaKnown RBP19.26■□□□□ 0.67
USP39-208ENST00000455732 PTPROQ16827 1216 aa19.26■□□□□ 0.67
USP39-208ENST00000455732 PAN2Q504Q3 1202 aaKnown RBP19.26■□□□□ 0.67
USP39-208ENST00000455732 HYIQ5T013 277 aa19.26■□□□□ 0.67
USP39-208ENST00000455732 FAM102BQ5T8I3 360 aa19.26■□□□□ 0.67
USP39-208ENST00000455732 KCTD17Q8N5Z5 321 aa19.26■□□□□ 0.67
USP39-208ENST00000455732 RNF149Q8NC42 400 aa19.26■□□□□ 0.67
USP39-208ENST00000455732 AK8Q96MA6 479 aa19.26■□□□□ 0.67
USP39-208ENST00000455732 C11orf84Q9BUA3 381 aaPredicted RBP19.26■□□□□ 0.67
USP39-208ENST00000455732 PLVAPQ9BX97 442 aa19.26■□□□□ 0.67
USP39-208ENST00000455732 NFKBIZQ9BYH8 718 aa19.26■□□□□ 0.67
USP39-208ENST00000455732 ZSCAN16Q9H4T2 348 aaPredicted RBP19.26■□□□□ 0.67
USP39-208ENST00000455732 DACT1Q9NYF0 836 aa19.26■□□□□ 0.67
USP39-208ENST00000455732 KIAA1024Q9UPX6 916 aa19.26■□□□□ 0.67
USP39-208ENST00000455732 VWA3AA6NCI4 1184 aa19.25■□□□□ 0.67
USP39-208ENST00000455732 SLC26A4O43511 780 aa19.25■□□□□ 0.67
USP39-208ENST00000455732 SRGAP2CP0DJJ0 459 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms