RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 CAPS2Q9BXY5 557 aa13.29□□□□□ -0.28
SEMA4D-213ENST00000455551 APEX2Q9UBZ4 518 aa13.29□□□□□ -0.28
SEMA4D-213ENST00000455551 AMACRQ9UHK6 382 aa13.29□□□□□ -0.28
SEMA4D-213ENST00000455551 SYNPO2Q9UMS6 1093 aa13.29□□□□□ -0.28
SEMA4D-213ENST00000455551 RBBP6Q7Z6E9 1792 aaKnown RBP13.29□□□□□ -0.28
SEMA4D-213ENST00000455551 IRAK1P51617 712 aa13.29□□□□□ -0.28
SEMA4D-213ENST00000455551 NNTQ13423 1086 aa13.29□□□□□ -0.28
SEMA4D-213ENST00000455551 PHLDB3Q6NSJ2 640 aa13.29□□□□□ -0.28
SEMA4D-213ENST00000455551 MAATS1Q7Z4T9 603 aa13.29□□□□□ -0.28
SEMA4D-213ENST00000455551 NT5DC3Q86UY8 548 aa13.29□□□□□ -0.28
SEMA4D-213ENST00000455551 FAM160B2Q86V87 743 aa13.29□□□□□ -0.28
SEMA4D-213ENST00000455551 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.29□□□□□ -0.28
SEMA4D-213ENST00000455551 CBWD1Q9BRT8 395 aa13.29□□□□□ -0.28
SEMA4D-213ENST00000455551 CENPHQ9H3R5 247 aa13.29□□□□□ -0.28
SEMA4D-213ENST00000455551 DMAC2Q9NW81 257 aa13.29□□□□□ -0.28
SEMA4D-213ENST00000455551 FEM1BQ9UK73 627 aa13.29□□□□□ -0.28
SEMA4D-213ENST00000455551 COL2A1P02458 1487 aaPredicted RBP13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 FOXN3O00409 490 aaPredicted RBP13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 USP8P40818 1118 aa13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 PDCLQ13371 301 aa13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 SCFD2Q8WU76 684 aa13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 SLC20A1Q8WUM9 679 aa13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 CTNNBL1Q8WYA6 563 aaPredicted RBP13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 CELF4Q9BZC1 486 aaKnown RBP13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 CHORDC1Q9UHD1 332 aaPredicted RBP13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 PPP1R9AQ9ULJ8 1098 aa13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 EMSYQ7Z589 1322 aa13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 EIF2AK2P19525 551 aaKnown RBP13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 TNFAIP3P21580 790 aa13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 GCLMP48507 274 aa13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 ITGB3BPQ13352 177 aaPredicted RBP13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 NBPF9Q3BBW0 867 aa13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 SLC30A5Q8TAD4 765 aa13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 ACTRT1Q8TDG2 376 aa13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 LMBR1Q8WVP7 490 aa13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 PIK3R5Q8WYR1 880 aa13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 THAP2Q9H0W7 228 aa13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 TAF1DQ9H5J8 278 aaPredicted RBP13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 GPRC5CQ9NQ84 441 aa13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 ZHX2Q9Y6X8 837 aa13.28□□□□□ -0.28
SEMA4D-213ENST00000455551 PPFIA4O75335 1185 aa13.27□□□□□ -0.28
SEMA4D-213ENST00000455551 ZBTB48P10074 688 aaPredicted RBP13.27□□□□□ -0.28
SEMA4D-213ENST00000455551 KRT13P13646 458 aa13.27□□□□□ -0.28
SEMA4D-213ENST00000455551 LMNB1P20700 586 aa13.27□□□□□ -0.28
SEMA4D-213ENST00000455551 GUCY2CP25092 1073 aa13.27□□□□□ -0.28
SEMA4D-213ENST00000455551 COPB2P35606 906 aa13.27□□□□□ -0.28
SEMA4D-213ENST00000455551 B3GNT9Q6UX72 402 aa13.27□□□□□ -0.28
SEMA4D-213ENST00000455551 IQCKQ8N0W5 287 aa13.27□□□□□ -0.28
SEMA4D-213ENST00000455551 KCTD17Q8N5Z5 321 aa13.27□□□□□ -0.28
SEMA4D-213ENST00000455551 GMLQ99445 158 aa13.27□□□□□ -0.28
SEMA4D-213ENST00000455551 TRIM31Q9BZY9 425 aa13.27□□□□□ -0.28
SEMA4D-213ENST00000455551 NEUROG2Q9H2A3 272 aa13.27□□□□□ -0.28
SEMA4D-213ENST00000455551 RAVER2Q9HCJ3 691 aaKnown RBP13.27□□□□□ -0.28
SEMA4D-213ENST00000455551 UBE2TQ9NPD8 197 aaPredicted RBP13.27□□□□□ -0.28
SEMA4D-213ENST00000455551 AMFRQ9UKV5 643 aa13.27□□□□□ -0.28
SEMA4D-213ENST00000455551 STXBP5LQ9Y2K9 1186 aa13.27□□□□□ -0.28
SEMA4D-213ENST00000455551 ZNF536O15090 1300 aa13.27□□□□□ -0.28
SEMA4D-213ENST00000455551 ZNF211Q13398 564 aaPredicted RBP13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 ZNF746Q6NUN9 644 aaPredicted RBP13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 ARHGEF19Q8IW93 802 aa13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 OR2W6PQ8NHA6 318 aa13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 PLAAQ9Y263 795 aa13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 UBE4BO95155 1302 aa13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 GOLGA8IPA6NC78 632 aa13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 GOLGA8JA6NMD2 632 aa13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 SHOX2O60902 331 aaPredicted RBP13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 FGGP02679 453 aa13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 ANXA13P27216 316 aa13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 CCT5P48643 541 aa13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 PPP3CAQ08209 521 aa13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 NFIL3Q16649 462 aa13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 SLFN11Q7Z7L1 901 aa13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 SYCE1Q8N0S2 351 aa13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 RFFLQ8WZ73 363 aa13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 SUCLA2Q9P2R7 463 aaPredicted RBP13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 NR2E1Q9Y466 385 aa13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 COL4A5P29400 1685 aa13.27□□□□□ -0.29
SEMA4D-213ENST00000455551 TTI1O43156 1089 aa13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 PPP1R37O75864 691 aa13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 MYCLP12524 364 aaPredicted RBP13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 SPP2Q13103 211 aa13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 PPP2R5AQ15172 486 aa13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 CEP85LQ5SZL2 805 aa13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 WHAMMQ8TF30 809 aa13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 BBXQ8WY36 941 aaPredicted RBP13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 KAT5Q92993 513 aa13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 RIT2Q99578 217 aa13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 DPH5Q9H2P9 285 aa13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 KCND2Q9NZV8 630 aa13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 LARSQ9P2J5 1176 aaKnown RBP13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 FEZ2Q9UHY8 353 aaPredicted RBP13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 A0A0A6YYK5 440 aaPredicted RBP13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 TMEM110-MUSTN1A8MSY1 372 aa13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 CES2O00748 559 aa13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 DAPK3O43293 454 aa13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 ICAM1P05362 532 aa13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 ECHS1P30084 290 aa13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 TTLL6Q8N841 843 aa13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 ELMO3Q96BJ8 720 aa13.26□□□□□ -0.29
SEMA4D-213ENST00000455551 ISCUQ9H1K1 167 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms