RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 ERVFC1P60507 584 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 GIT2Q14161 759 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 PRR16Q569H4 304 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 PLPP4Q5VZY2 271 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 EFCAB12Q6NXP0 572 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 TMC7Q7Z402 723 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 ECHDC2Q86YB7 292 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 UBALD2Q8IYN6 164 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 TMEM87AQ8NBN3 555 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 RDM1Q8NG50 284 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 RIPOR3Q96MK2 946 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 RIT2Q99578 217 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 C22orf23Q9BZE7 217 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 S1PR5Q9H228 398 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 CDHR5Q9HBB8 845 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 CHST12Q9NRB3 414 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 DZANK1Q9NVP4 752 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 GABBR1Q9UBS5 961 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 PCDHGC5Q9Y5F6 944 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 CACNA1HO95180 2353 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 MYO10Q9HD67 2058 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 NID2Q14112 1375 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 A0A0U1RQF3 1178 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 PRPF3O43395 683 aaKnown RBP9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 GAS7O60861 476 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 DARSP14868 501 aaKnown RBP9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 ATP4AP20648 1035 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 MTHFRP42898 656 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 DNM2P50570 870 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 USP11P51784 963 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 CLCN3P51790 818 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 TBC1D8BQ0IIM8 1120 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 MTMR3Q13615 1198 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 KCNC3Q14003 757 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 TMEM92Q6UXU6 159 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 MRPL43Q8N983 215 aaKnown RBP9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 PRSS33Q8NF86 280 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 VN1R2Q8NFZ6 395 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 NLRP7Q8WX94 980 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 TMEM169Q96HH4 297 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 CASD1Q96PB1 797 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 PPP1R16BQ96T49 567 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 GCOM2Q9BZD3 368 aaPredicted RBP9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 INO80BQ9C086 356 aaPredicted RBP9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 ADAM7Q9H2U9 754 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 ADAMTS10Q9H324 1103 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 DISC1Q9NRI5 854 aa9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 FAM217BQ9NTX9 383 aaPredicted RBP9.05□□□□□ -0.96
NIF3L1-209ENST00000454952 CDC45O75419 566 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 SFPQP23246 707 aaKnown RBP eCLIP9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 CDC27P30260 824 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 RAB27AP51159 221 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 GPC3P51654 580 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 POLGP54098 1239 aaPredicted RBP9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 PRKCEQ02156 737 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 APOBRQ0VD83 1088 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 COL9A3Q14050 684 aaPredicted RBP9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 LLGL2Q6P1M3 1020 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 SYCE2Q6PIF2 218 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 PPFIBP1Q86W92 1011 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 PLPP6Q8IY26 295 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 FAM177A1Q8N128 213 aaPredicted RBP9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 SLC39A11Q8N1S5 342 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 FBXL16Q8N461 479 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 LINC01465Q8N7H1 131 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 RNF169Q8NCN4 708 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 ASIC4Q96FT7 647 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 TCEANC2Q96MN5 208 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 JPH2Q9BR39 696 aaPredicted RBP9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 TRAIPQ9BWF2 469 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 TEKT3Q9BXF9 490 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 RNF26Q9BY78 433 aaPredicted RBP9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 SH3GLB2Q9NR46 395 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 SORCS3Q9UPU3 1222 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 C5orf42Q9H799 3197 aa9.04□□□□□ -0.96
NIF3L1-209ENST00000454952 C2orf71A6NGG8 1288 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 HIDE1A8MVS5 230 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 DPYSL4O14531 572 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 PSMA5P28066 241 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 AVPR2P30518 371 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 ADD1P35611 737 aaKnown RBP9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 TCF15Q12870 199 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 XKR3Q5GH77 459 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 CLLU1OSQ5K130 101 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 ATAT1Q5SQI0 421 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 LRCH2Q5VUJ6 765 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 SMYD5Q6GMV2 418 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 BLOC1S2Q6QNY1 142 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 GLB1LQ6UWU2 654 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 LRRC55Q6ZSA7 311 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 TRMT1LQ7Z2T5 733 aaKnown RBP9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 ZNF598Q86UK7 904 aaKnown RBP9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 ZNF410Q86VK4 478 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 EXOC8Q8IYI6 725 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 TRIM22Q8IYM9 498 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 LRRC71Q8N4P6 559 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 TDRD5Q8NAT2 981 aaKnown RBP9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 KREMEN2Q8NCW0 462 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 CCDC136Q96JN2 1154 aa9.03□□□□□ -0.96
NIF3L1-209ENST00000454952 NIFKQ9BYG3 293 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 531.6 ms