RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 CHST13Q8NET6 341 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 SPATC1LQ9H0A9 340 aa14.89□□□□□ -0.03
CLK3-203ENST00000454830 NCK2O43639 380 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 HARSP12081 509 aaKnown RBP14.88□□□□□ -0.03
CLK3-203ENST00000454830 NPTX2P47972 431 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 HGSNATQ68CP4 663 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 IQCEQ6IPM2 695 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 ZSWIM2Q8NEG5 633 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 U2AF1L4Q8WU68 220 aaKnown RBP14.88□□□□□ -0.03
CLK3-203ENST00000454830 PARD6BQ9BYG5 372 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 ANKEF1Q9NU02 776 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 BRCA1P38398 1863 aaKnown RBP14.88□□□□□ -0.03
CLK3-203ENST00000454830 SSU72P8A0A1W2PR75 194 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 DLATP10515 647 aaKnown RBP14.88□□□□□ -0.03
CLK3-203ENST00000454830 MARK3P27448 753 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 ERO1BQ86YB8 467 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 SMAP1Q8IYB5 467 aaPredicted RBP14.88□□□□□ -0.03
CLK3-203ENST00000454830 GPR161Q8N6U8 529 aaKnown RBP14.88□□□□□ -0.03
CLK3-203ENST00000454830 TMEM143Q96AN5 459 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 PACSIN1Q9BY11 444 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 ASCC2Q9H1I8 757 aaPredicted RBP14.88□□□□□ -0.03
CLK3-203ENST00000454830 FBXO40Q9UH90 709 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 UBE4BO95155 1302 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 LRRIQ4A6NIV6 560 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 RNASE9P60153 205 aaKnown RBP14.88□□□□□ -0.03
CLK3-203ENST00000454830 DLG4P78352 724 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 ZC3H3Q8IXZ2 948 aaKnown RBP14.88□□□□□ -0.03
CLK3-203ENST00000454830 GLG1Q92896 1179 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 IWS1Q96ST2 819 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 INTS2Q9H0H0 1204 aaKnown RBP14.88□□□□□ -0.03
CLK3-203ENST00000454830 ZNF302Q9NR11 478 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 MYH11P35749 1972 aa14.88□□□□□ -0.03
CLK3-203ENST00000454830 VAMP7P51809 220 aa14.87□□□□□ -0.03
CLK3-203ENST00000454830 GHRHRQ02643 423 aa14.87□□□□□ -0.03
CLK3-203ENST00000454830 TUBB2AQ13885 445 aa14.87□□□□□ -0.03
CLK3-203ENST00000454830 LBX2Q6XYB7 198 aa14.87□□□□□ -0.03
CLK3-203ENST00000454830 RABGGTAQ92696 567 aa14.87□□□□□ -0.03
CLK3-203ENST00000454830 MKNK1Q9BUB5 465 aa14.87□□□□□ -0.03
CLK3-203ENST00000454830 TUBB2BQ9BVA1 445 aa14.87□□□□□ -0.03
CLK3-203ENST00000454830 EIF3JO75822 258 aaKnown RBP14.87□□□□□ -0.03
CLK3-203ENST00000454830 FTCDO95954 541 aa14.87□□□□□ -0.03
CLK3-203ENST00000454830 ALCAMQ13740 583 aa14.87□□□□□ -0.03
CLK3-203ENST00000454830 DRAP1Q14919 205 aaPredicted RBP14.87□□□□□ -0.03
CLK3-203ENST00000454830 OPTNQ96CV9 577 aa14.87□□□□□ -0.03
CLK3-203ENST00000454830 POLR3FQ9H1D9 316 aaPredicted RBP14.87□□□□□ -0.03
CLK3-203ENST00000454830 ADAMTS5Q9UNA0 930 aa14.87□□□□□ -0.03
CLK3-203ENST00000454830 SSC5DA1L4H1 1573 aa14.87□□□□□ -0.03
CLK3-203ENST00000454830 ALDH5A1P51649 535 aaPredicted RBP14.87□□□□□ -0.03
CLK3-203ENST00000454830 SP2Q02086 613 aa14.87□□□□□ -0.03
CLK3-203ENST00000454830 KCTD2Q14681 263 aa14.87□□□□□ -0.03
CLK3-203ENST00000454830 SLC18A3Q16572 532 aa14.87□□□□□ -0.03
CLK3-203ENST00000454830 INTS8Q75QN2 995 aaKnown RBP14.87□□□□□ -0.03
CLK3-203ENST00000454830 ATP6V0A4Q9HBG4 840 aa14.87□□□□□ -0.03
CLK3-203ENST00000454830 UBE2TQ9NPD8 197 aaPredicted RBP14.87□□□□□ -0.03
CLK3-203ENST00000454830 AJAP1Q9UKB5 411 aaPredicted RBP14.87□□□□□ -0.03
CLK3-203ENST00000454830 NOP56O00567 594 aaKnown RBP14.86□□□□□ -0.03
CLK3-203ENST00000454830 LYPLA2O95372 231 aa14.86□□□□□ -0.03
CLK3-203ENST00000454830 MAP2K1Q02750 393 aaPredicted RBP14.86□□□□□ -0.03
CLK3-203ENST00000454830 ARMC9Q7Z3E5 817 aa14.86□□□□□ -0.03
CLK3-203ENST00000454830 SUGCTQ9HAC7 445 aa14.86□□□□□ -0.03
CLK3-203ENST00000454830 PLCB1Q9NQ66 1216 aa14.86□□□□□ -0.03
CLK3-203ENST00000454830 DOCK1Q14185 1865 aa14.86□□□□□ -0.03
CLK3-203ENST00000454830 ABCB4P21439 1286 aa14.86□□□□□ -0.03
CLK3-203ENST00000454830 NFRKBQ6P4R8 1299 aa14.86□□□□□ -0.03
CLK3-203ENST00000454830 ALKBH5Q6P6C2 394 aaKnown RBP14.86□□□□□ -0.03
CLK3-203ENST00000454830 ZNF571Q7Z3V5 609 aaPredicted RBP14.86□□□□□ -0.03
CLK3-203ENST00000454830 CBWD2Q8IUF1 395 aa14.86□□□□□ -0.03
CLK3-203ENST00000454830 NOA1Q8NC60 698 aaKnown RBP14.86□□□□□ -0.03
CLK3-203ENST00000454830 KIFAP3Q92845 792 aa14.86□□□□□ -0.03
CLK3-203ENST00000454830 MMS19Q96T76 1030 aa14.86□□□□□ -0.03
CLK3-203ENST00000454830 CYP26B1Q9NR63 512 aa14.86□□□□□ -0.03
CLK3-203ENST00000454830 TBX20Q9UMR3 447 aa14.86□□□□□ -0.03
CLK3-203ENST00000454830 MYH10P35580 1976 aa14.86□□□□□ -0.03
CLK3-203ENST00000454830 KLRC1P26715 233 aa14.86□□□□□ -0.03
CLK3-203ENST00000454830 CNGA1P29973 690 aa14.86□□□□□ -0.03
CLK3-203ENST00000454830 PPM1KQ8N3J5 372 aa14.86□□□□□ -0.03
CLK3-203ENST00000454830 BSNDQ8WZ55 320 aa14.86□□□□□ -0.03
CLK3-203ENST00000454830 SYN2Q92777 582 aaPredicted RBP14.86□□□□□ -0.03
CLK3-203ENST00000454830 ELMO3Q96BJ8 720 aa14.86□□□□□ -0.03
CLK3-203ENST00000454830 ARFGAP3Q9NP61 516 aa14.86□□□□□ -0.03
CLK3-203ENST00000454830 ANKRD63C9JTQ0 380 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 DGAT1O75907 488 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 GGPS1O95749 300 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 SUPT20HL2P0C7V6 817 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 MXI1P50539 228 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 PPATQ06203 517 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 CKAP4Q07065 602 aaKnown RBP14.85□□□□□ -0.03
CLK3-203ENST00000454830 SH3D19Q5HYK7 790 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 MCPH1Q8NEM0 835 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 RDM1Q8NG50 284 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 SLC7A3Q8WY07 619 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 SLC10A4Q96EP9 437 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 PACSIN2Q9UNF0 486 aaPredicted RBP14.85□□□□□ -0.03
CLK3-203ENST00000454830 JRKLQ9Y4A0 524 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 PFASO15067 1338 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 SPATA31C2B4DYI2 1134 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 LIG4P49917 911 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 MRPS25P82663 173 aaKnown RBP14.85□□□□□ -0.03
CLK3-203ENST00000454830 TMEM132AQ24JP5 1023 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 XKR3Q5GH77 459 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms