RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 FAM153CQ494X1 144 aa13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 ZC2HC1CQ53FD0 456 aaPredicted RBP13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 ODR4Q5SWX8 454 aa13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 INTS8Q75QN2 995 aaKnown RBP13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 RTKN2Q8IZC4 609 aa13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 SPICE1Q8N0Z3 855 aa13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 U2AF1L4Q8WU68 220 aaKnown RBP13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 LRRC45Q96CN5 670 aa13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 FAM107BQ9H098 131 aa13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 CARD9Q9H257 536 aa13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 FAM153AQ9UHL3 310 aa13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 AMFRQ9UKV5 643 aa13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 PACSIN2Q9UNF0 486 aaPredicted RBP13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 NOC2LQ9Y3T9 749 aaKnown RBP13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 PFASO15067 1338 aa13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 ANKRD62A6NC57 917 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 ZNF233A6NK53 670 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 SFI1A8K8P3 1242 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 HMGB1P1B2RPK0 211 aaPredicted RBP13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 DDX3YO15523 660 aaKnown RBP13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 SART1O43290 800 aaKnown RBP13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 CEP104O60308 925 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 HIP1RO75146 1068 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 MTA2O94776 668 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 NOP2P46087 812 aaKnown RBP13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 IRX5P78411 483 aaPredicted RBP13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 MTMR3Q13615 1198 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 CBWD6Q4V339 395 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 EPC2Q52LR7 807 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 CBWD3Q5JTY5 395 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 CBWD5Q5RIA9 395 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 PCNX4Q63HM2 1172 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 GJB7Q6PEY0 223 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 MAATS1Q7Z4T9 603 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 MCF2L2Q86YR7 1114 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 RHOT2Q8IXI1 618 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 EFCAB13Q8IY85 973 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 AGBL3Q8NEM8 1001 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 CCDC26Q8TAB7 109 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 ARL8AQ96BM9 186 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 HVCN1Q96D96 273 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 CCDC43Q96MW1 224 aaKnown RBP13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 PAGR1Q9BTK6 254 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 LARSQ9P2J5 1176 aaKnown RBP13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 FEZ2Q9UHY8 353 aaPredicted RBP13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 PARP14Q460N5 1801 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 ZSCAN5CA6NGD5 496 aaPredicted RBP13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 TCP10L2B9ZVM9 353 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 ASNSP08243 561 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 ITGB5P18084 799 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 CHRNA5P30532 468 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 CORO7P57737 925 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 GTF2BQ00403 316 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 PLS1Q14651 629 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 COG2Q14746 738 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 TNIP1Q15025 636 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 ENOX2Q16206 610 aaKnown RBP13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 C11orf63Q6NUN7 778 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 CCDC174Q6PII3 467 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 MORC4Q8TE76 937 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 CLEC4DQ8WXI8 215 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 ACCSQ96QU6 501 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 IWS1Q96ST2 819 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 NAP1L3Q99457 506 aaPredicted RBP13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 FAM114A2Q9NRY5 505 aa13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.59□□□□□ -0.23
ECHDC1-209ENST00000454591 FER1L6Q2WGJ9 1857 aa13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 COL4A5P29400 1685 aa13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 MIF4GDA9UHW6 222 aaKnown RBP13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 H0YGN5 161 aa13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 ZBTB39O15060 712 aa13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 WDR46O15213 610 aaKnown RBP13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 BUB1BO60566 1050 aaPredicted RBP13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 KRT13P13646 458 aa13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 PLS3P13797 630 aa13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 HSPA6P17066 643 aa13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 DNAJC21Q5F1R6 531 aaKnown RBP13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 PADI6Q6TGC4 694 aa13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 MIER3Q7Z3K6 550 aa13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 DAAM2Q86T65 1068 aa13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 C4orf19Q8IY42 314 aa13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 RDM1Q8NG50 284 aa13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 SLC35G2Q8TBE7 412 aa13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 CTNNBL1Q8WYA6 563 aaPredicted RBP13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 LPAR1Q92633 364 aa13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 ATP6V1G3Q96LB4 118 aa13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 TMBIM4Q9HC24 238 aa13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 AGO4Q9HCK5 861 aaKnown RBP13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 TBC1D22BQ9NU19 505 aa13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 NFS1Q9Y697 457 aa13.58□□□□□ -0.24
ECHDC1-209ENST00000454591 FAM187AA6NFU0 413 aa13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 KRIT1O00522 736 aa13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 CHMP2AO43633 222 aa13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 EXOC3O60645 756 aa13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 GZMAP12544 262 aa13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 TNFAIP3P21580 790 aa13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 RARRES1P49788 294 aa13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 DRG2P55039 364 aaKnown RBP13.57□□□□□ -0.24
ECHDC1-209ENST00000454591 PTENP60484 403 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms