RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 HPS3Q969F9 1004 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 COA7Q96BR5 231 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 SLC2A13Q96QE2 648 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 TAAR9Q96RI9 348 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 PPP1R16BQ96T49 567 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 BTBD2Q9BX70 525 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 HAPLN2Q9GZV7 340 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 IFT122Q9HBG6 1241 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 DCP1AQ9NPI6 582 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 RBPJLQ9UBG7 517 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 SCOCQ9UIL1 159 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 SERPINB13Q9UIV8 391 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 RCAN3Q9UKA8 241 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 PTPN22Q9Y2R2 807 aa4.85□□□□□ -1.63
HMGB1P15-201ENST00000453854 BICRAQ9NZM4 1560 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 ST20-MTHFSA0A0A6YYL1 179 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 ETV2O00321 342 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 PLIN1O60240 522 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 OPHN1O60890 802 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 PEX14O75381 377 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 APOL3O95236 402 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 IL18BPO95998 194 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 C8BP07358 591 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 CELA3BP08861 270 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 NCAM1P13591 858 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 APEX1P27695 318 aaKnown RBP4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 VIPR1P32241 457 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 PDE6BP35913 854 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 WASP42768 502 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 LGALS4P56470 323 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 ZNF200P98182 395 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 GALEQ14376 348 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 GRM3Q14832 879 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 SKIDA1Q1XH10 827 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 VASNQ6EMK4 673 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 LILRA6Q6PI73 481 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 CHST15Q7LFX5 561 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 TMC6Q7Z403 805 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 THEMISQ8N1K5 641 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 MIER2Q8N344 545 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 OR14C36Q8NHC7 312 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 PMM1Q92871 262 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 TOX2Q96NM4 488 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 SARGQ9BW04 601 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 GTPBP4Q9BZE4 634 aaKnown RBP4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 UBA5Q9GZZ9 404 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 OR10A5Q9H207 317 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 EPB41L4BQ9H329 900 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 MTG2Q9H4K7 406 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 CD320Q9NPF0 282 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 DLL4Q9NR61 685 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 CHST12Q9NRB3 414 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 C1orf112Q9NSG2 853 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 DPP7Q9UHL4 492 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 CDY2AQ9Y6F7 541 aa4.84□□□□□ -1.63
HMGB1P15-201ENST00000453854 NPIPB6E9PJ23 425 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 MAFGO15525 162 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 AP1G1O43747 822 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 OFD1O75665 1012 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 ZSCAN22P10073 491 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 HDAC1Q13547 482 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 SPIDRQ14159 915 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 ADRM1Q16186 407 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 IFIT1BQ5T764 474 aaKnown RBP4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 SLC4A10Q6U841 1118 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 CD300LDQ6UXZ3 194 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 ATG14Q6ZNE5 492 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 USP45Q70EL2 814 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 CXXC5Q7LFL8 322 aaKnown RBP4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 BMP8AQ7Z5Y6 402 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 FAM43AQ8N2R8 423 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 CDYL2Q8N8U2 506 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 SVIPQ8NHG7 77 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 PPP1R14CQ8TAE6 165 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 RPGRQ92834 1020 aaKnown RBP4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 TIFAQ96CG3 184 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 LRGUKQ96M69 825 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 TMEM209Q96SK2 561 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 PCDH18Q9HCL0 1135 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 DDX21Q9NR30 783 aaKnown RBP eCLIP4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 KCMF1Q9P0J7 381 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 DDX20Q9UHI6 824 aaKnown RBP4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 PCDHB6Q9Y5E3 794 aa4.83□□□□□ -1.64
HMGB1P15-201ENST00000453854 CUTAO60888 179 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 SEC24DO94855 1032 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 PCDH8O95206 1070 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 MED14OSP0DP75 135 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 PHKG2P15735 406 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 PDCP20941 246 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 EDNRBP24530 442 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 IGFBP6P24592 240 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 IL13RA1P78552 427 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 KIF23Q02241 960 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 NFATC3Q12968 1075 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 MALLQ13021 153 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 ZNF267Q14586 743 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 ARHGAP29Q52LW3 1261 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 TMC5Q6UXY8 1006 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 CATIPQ7Z7H3 387 aa4.82□□□□□ -1.64
HMGB1P15-201ENST00000453854 B3GNT8Q7Z7M8 397 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms