RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 VWA7Q9Y334 891 aa6.33□□□□□ -1.4
USP25-206ENST00000453553 PCDHB6Q9Y5E3 794 aa6.33□□□□□ -1.4
USP25-206ENST00000453553 GABRDO14764 452 aa6.32□□□□□ -1.4
USP25-206ENST00000453553 SASH1O94885 1247 aa6.32□□□□□ -1.4
USP25-206ENST00000453553 ZNF888P0CJ79 500 aaPredicted RBP6.32□□□□□ -1.4
USP25-206ENST00000453553 TRIM25Q14258 630 aaKnown RBP6.32□□□□□ -1.4
USP25-206ENST00000453553 PCOLCEQ15113 449 aa6.32□□□□□ -1.4
USP25-206ENST00000453553 ZNF827Q17R98 1081 aa6.32□□□□□ -1.4
USP25-206ENST00000453553 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.32□□□□□ -1.4
USP25-206ENST00000453553 KLHDC10Q6PID8 442 aa6.32□□□□□ -1.4
USP25-206ENST00000453553 KBTBD2Q8IY47 623 aa6.32□□□□□ -1.4
USP25-206ENST00000453553 RTKN2Q8IZC4 609 aa6.32□□□□□ -1.4
USP25-206ENST00000453553 KCNC2Q96PR1 638 aa6.32□□□□□ -1.4
USP25-206ENST00000453553 KCTD10Q9H3F6 313 aa6.32□□□□□ -1.4
USP25-206ENST00000453553 RAPGEFL1Q9UHV5 662 aa6.32□□□□□ -1.4
USP25-206ENST00000453553 EDARQ9UNE0 448 aa6.32□□□□□ -1.4
USP25-206ENST00000453553 SPEF1Q9Y4P9 236 aa6.32□□□□□ -1.4
USP25-206ENST00000453553 A0A0A6YYK5 440 aaPredicted RBP6.31□□□□□ -1.4
USP25-206ENST00000453553 B4GALT4O60513 344 aa6.31□□□□□ -1.4
USP25-206ENST00000453553 H2AFYO75367 372 aaKnown RBP6.31□□□□□ -1.4
USP25-206ENST00000453553 MEOX1P50221 254 aa6.31□□□□□ -1.4
USP25-206ENST00000453553 LGALS4P56470 323 aa6.31□□□□□ -1.4
USP25-206ENST00000453553 SESN2P58004 480 aaPredicted RBP6.31□□□□□ -1.4
USP25-206ENST00000453553 MRPS9P82933 396 aaKnown RBP6.31□□□□□ -1.4
USP25-206ENST00000453553 CCDC178Q5BJE1 867 aa6.31□□□□□ -1.4
USP25-206ENST00000453553 PGM2L1Q6PCE3 622 aa6.31□□□□□ -1.4
USP25-206ENST00000453553 BORAQ6PGQ7 559 aa6.31□□□□□ -1.4
USP25-206ENST00000453553 GPR155Q7Z3F1 870 aa6.31□□□□□ -1.4
USP25-206ENST00000453553 RALYLQ86SE5 291 aaKnown RBP6.31□□□□□ -1.4
USP25-206ENST00000453553 OR14C36Q8NHC7 312 aa6.31□□□□□ -1.4
USP25-206ENST00000453553 PPP1R14CQ8TAE6 165 aa6.31□□□□□ -1.4
USP25-206ENST00000453553 NKD2Q969F2 451 aaPredicted RBP6.31□□□□□ -1.4
USP25-206ENST00000453553 GFM2Q969S9 779 aaKnown RBP6.31□□□□□ -1.4
USP25-206ENST00000453553 FAXDC2Q96IV6 333 aa6.31□□□□□ -1.4
USP25-206ENST00000453553 WDR92Q96MX6 357 aa6.31□□□□□ -1.4
USP25-206ENST00000453553 SOX7Q9BT81 388 aa6.31□□□□□ -1.4
USP25-206ENST00000453553 OSBPL6Q9BZF3 934 aa6.31□□□□□ -1.4
USP25-206ENST00000453553 USP40Q9NVE5 1235 aa6.31□□□□□ -1.4
USP25-206ENST00000453553 POLR3BQ9NW08 1133 aaPredicted RBP6.31□□□□□ -1.4
USP25-206ENST00000453553 DNAI1Q9UI46 699 aa6.31□□□□□ -1.4
USP25-206ENST00000453553 PTPN22Q9Y2R2 807 aa6.31□□□□□ -1.4
USP25-206ENST00000453553 TNKSO95271 1327 aa6.3□□□□□ -1.4
USP25-206ENST00000453553 TRIM75PA6NK02 468 aa6.3□□□□□ -1.4
USP25-206ENST00000453553 B4GALT3O60512 393 aa6.3□□□□□ -1.4
USP25-206ENST00000453553 CFBP00751 764 aa6.3□□□□□ -1.4
USP25-206ENST00000453553 CELA3BP08861 270 aa6.3□□□□□ -1.4
USP25-206ENST00000453553 MYBL2P10244 700 aa6.3□□□□□ -1.4
USP25-206ENST00000453553 XPAP23025 273 aaPredicted RBP6.3□□□□□ -1.4
USP25-206ENST00000453553 IARSP41252 1262 aaKnown RBP6.3□□□□□ -1.4
USP25-206ENST00000453553 MRE11P49959 708 aa6.3□□□□□ -1.4
USP25-206ENST00000453553 RRADP55042 308 aa6.3□□□□□ -1.4
USP25-206ENST00000453553 PPARAQ07869 468 aa6.3□□□□□ -1.4
USP25-206ENST00000453553 MAN2A1Q16706 1144 aa6.3□□□□□ -1.4
USP25-206ENST00000453553 ZMAT1Q5H9K5 638 aa6.3□□□□□ -1.4
USP25-206ENST00000453553 TOR2AQ5JU69 321 aa6.3□□□□□ -1.4
USP25-206ENST00000453553 NOL8Q76FK4 1167 aaKnown RBP6.3□□□□□ -1.4
USP25-206ENST00000453553 KCNK18Q7Z418 384 aa6.3□□□□□ -1.4
USP25-206ENST00000453553 LGI4Q8N135 537 aa6.3□□□□□ -1.4
USP25-206ENST00000453553 C1orf162Q8NEQ5 155 aaPredicted RBP6.3□□□□□ -1.4
USP25-206ENST00000453553 FEZF2Q8TBJ5 459 aa6.3□□□□□ -1.4
USP25-206ENST00000453553 FUBP3Q96I24 572 aaKnown RBP eCLIP6.3□□□□□ -1.4
USP25-206ENST00000453553 CEP89Q96ST8 783 aa6.3□□□□□ -1.4
USP25-206ENST00000453553 QRSL1Q9H0R6 528 aaKnown RBP6.3□□□□□ -1.4
USP25-206ENST00000453553 ZCCHC4Q9H5U6 513 aa6.3□□□□□ -1.4
USP25-206ENST00000453553 CCM2LQ9NUG4 571 aaPredicted RBP6.3□□□□□ -1.4
USP25-206ENST00000453553 DNAJC28Q9NX36 388 aa6.3□□□□□ -1.4
USP25-206ENST00000453553 KLHL42Q9P2K6 505 aa6.3□□□□□ -1.4
USP25-206ENST00000453553 SHTN1A0MZ66 631 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 DAPK3O43293 454 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 NRP2O60462 931 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 MT-CO1P00395 513 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 RBP3P10745 1247 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 MTHFD2P13995 350 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 SRSF2Q01130 221 aaKnown RBP6.29□□□□□ -1.4
USP25-206ENST00000453553 ADAM15Q13444 863 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 ABCB5Q2M3G0 1257 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 AGBL4Q5VU57 503 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 KRTAP5-3Q6L8H2 238 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 USP30Q70CQ3 517 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 GAREM2Q75VX8 874 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 AMOTL1Q8IY63 956 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 AUTS2Q8WXX7 1259 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 KIAA1683Q9H0B3 1180 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 OR10A2Q9H208 303 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 PARD6AQ9NPB6 346 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.29□□□□□ -1.4
USP25-206ENST00000453553 MKS1Q9NXB0 559 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 DPP7Q9UHL4 492 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 EVLQ9UI08 416 aaPredicted RBP6.29□□□□□ -1.4
USP25-206ENST00000453553 CDY2AQ9Y6F7 541 aa6.29□□□□□ -1.4
USP25-206ENST00000453553 OTOL1A6NHN0 477 aaPredicted RBP6.28□□□□□ -1.4
USP25-206ENST00000453553 SEC24DO94855 1032 aaPredicted RBP6.28□□□□□ -1.4
USP25-206ENST00000453553 FSBPO95073 299 aa6.28□□□□□ -1.4
USP25-206ENST00000453553 INHBBP09529 407 aa6.28□□□□□ -1.4
USP25-206ENST00000453553 HNRNPLP14866 589 aaKnown RBP eCLIP6.28□□□□□ -1.4
USP25-206ENST00000453553 MTNR1BP49286 362 aa6.28□□□□□ -1.4
USP25-206ENST00000453553 NRG3P56975 720 aa6.28□□□□□ -1.4
USP25-206ENST00000453553 CD69Q07108 199 aa6.28□□□□□ -1.4
USP25-206ENST00000453553 SPIDRQ14159 915 aa6.28□□□□□ -1.4
USP25-206ENST00000453553 TBR1Q16650 682 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms