RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 DMDP11532 3685 aa13.14□□□□□ -0.31
GARNL3-210ENST00000453030 A0A0U1RQF3 1178 aa13.14□□□□□ -0.31
GARNL3-210ENST00000453030 ZC3H11AO75152 810 aaKnown RBP eCLIP13.14□□□□□ -0.31
GARNL3-210ENST00000453030 PSMD10O75832 226 aa13.14□□□□□ -0.31
GARNL3-210ENST00000453030 PSMA5P28066 241 aa13.14□□□□□ -0.31
GARNL3-210ENST00000453030 USP11P51784 963 aa13.14□□□□□ -0.31
GARNL3-210ENST00000453030 SMC1AQ14683 1233 aaKnown RBP13.14□□□□□ -0.31
GARNL3-210ENST00000453030 TARBP2Q15633 366 aaKnown RBP13.14□□□□□ -0.31
GARNL3-210ENST00000453030 TMEM184AQ6ZMB5 413 aa13.14□□□□□ -0.31
GARNL3-210ENST00000453030 BMP8AQ7Z5Y6 402 aa13.14□□□□□ -0.31
GARNL3-210ENST00000453030 ZNF598Q86UK7 904 aaKnown RBP13.14□□□□□ -0.31
GARNL3-210ENST00000453030 TRIM22Q8IYM9 498 aa13.14□□□□□ -0.31
GARNL3-210ENST00000453030 SLC39A11Q8N1S5 342 aa13.14□□□□□ -0.31
GARNL3-210ENST00000453030 ZNF710Q8N1W2 664 aa13.14□□□□□ -0.31
GARNL3-210ENST00000453030 FBXL16Q8N461 479 aa13.14□□□□□ -0.31
GARNL3-210ENST00000453030 LPPQ93052 612 aa13.14□□□□□ -0.31
GARNL3-210ENST00000453030 PHOX2BQ99453 314 aa13.14□□□□□ -0.31
GARNL3-210ENST00000453030 LARP6Q9BRS8 491 aaKnown RBP13.14□□□□□ -0.31
GARNL3-210ENST00000453030 MRPL9Q9BYD2 267 aaKnown RBP13.14□□□□□ -0.31
GARNL3-210ENST00000453030 GCOM2Q9BZD3 368 aaPredicted RBP13.14□□□□□ -0.31
GARNL3-210ENST00000453030 S1PR5Q9H228 398 aa13.14□□□□□ -0.31
GARNL3-210ENST00000453030 SH3GLB2Q9NR46 395 aa13.14□□□□□ -0.31
GARNL3-210ENST00000453030 DACT1Q9NYF0 836 aa13.14□□□□□ -0.31
GARNL3-210ENST00000453030 PCDHA4Q9UN74 947 aa13.14□□□□□ -0.31
GARNL3-210ENST00000453030 HCFC2Q9Y5Z7 792 aa13.14□□□□□ -0.31
GARNL3-210ENST00000453030 CFAP54Q96N23 3096 aa13.14□□□□□ -0.31
GARNL3-210ENST00000453030 A0A087WZ62 844 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.13□□□□□ -0.31
GARNL3-210ENST00000453030 C2orf71A6NGG8 1288 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 REC8O95072 547 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 SFPQP23246 707 aaKnown RBP eCLIP13.13□□□□□ -0.31
GARNL3-210ENST00000453030 BCAR1P56945 870 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 SSRP1Q08945 709 aaKnown RBP13.13□□□□□ -0.31
GARNL3-210ENST00000453030 SIGLEC14Q08ET2 396 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 STK3Q13188 491 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 TOB2Q14106 344 aaPredicted RBP13.13□□□□□ -0.31
GARNL3-210ENST00000453030 PTPN21Q16825 1174 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 Q4G0T1 1027 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 XKR3Q5GH77 459 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 PLA2G4FQ68DD2 849 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 TWF2Q6IBS0 349 aaKnown RBP13.13□□□□□ -0.31
GARNL3-210ENST00000453030 TMEM173Q86WV6 379 aaPredicted RBP13.13□□□□□ -0.31
GARNL3-210ENST00000453030 RHPN2Q8IUC4 686 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 FBXL6Q8N531 539 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 RDM1Q8NG50 284 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 AUTS2Q8WXX7 1259 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 CASP10Q92851 521 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 TMEM169Q96HH4 297 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 NLRP4Q96MN2 994 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 AIFM3Q96NN9 605 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 FDXACB1Q9BRP7 624 aaPredicted RBP13.13□□□□□ -0.31
GARNL3-210ENST00000453030 PIN4Q9Y237 131 aaKnown RBP13.13□□□□□ -0.31
GARNL3-210ENST00000453030 INPP5FQ9Y2H2 1132 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 VPS13AQ96RL7 3174 aa13.13□□□□□ -0.31
GARNL3-210ENST00000453030 PLXNA3P51805 1871 aa13.12□□□□□ -0.31
GARNL3-210ENST00000453030 CPLX1O14810 134 aa13.12□□□□□ -0.31
GARNL3-210ENST00000453030 DEXIO95424 95 aa13.12□□□□□ -0.31
GARNL3-210ENST00000453030 EOMESO95936 686 aa13.12□□□□□ -0.31
GARNL3-210ENST00000453030 WEE2P0C1S8 567 aa13.12□□□□□ -0.31
GARNL3-210ENST00000453030 HOXB8P17481 243 aaPredicted RBP13.12□□□□□ -0.31
GARNL3-210ENST00000453030 PHKA2P46019 1235 aa13.12□□□□□ -0.31
GARNL3-210ENST00000453030 ALDH7A1P49419 539 aaKnown RBP13.12□□□□□ -0.31
GARNL3-210ENST00000453030 VCPP55072 806 aaKnown RBP13.12□□□□□ -0.31
GARNL3-210ENST00000453030 TPRNQ4KMQ1 711 aa13.12□□□□□ -0.31
GARNL3-210ENST00000453030 RUFY3Q7L099 469 aa13.12□□□□□ -0.31
GARNL3-210ENST00000453030 KSR1Q8IVT5 923 aa13.12□□□□□ -0.31
GARNL3-210ENST00000453030 BLIDQ8IZY5 108 aa13.12□□□□□ -0.31
GARNL3-210ENST00000453030 ETNPPLQ8TBG4 499 aa13.12□□□□□ -0.31
GARNL3-210ENST00000453030 ASIC4Q96FT7 647 aa13.12□□□□□ -0.31
GARNL3-210ENST00000453030 C22orf23Q9BZE7 217 aa13.12□□□□□ -0.31
GARNL3-210ENST00000453030 POMKQ9H5K3 350 aa13.12□□□□□ -0.31
GARNL3-210ENST00000453030 MEIS3P2A8K0S8 358 aa13.11□□□□□ -0.31
GARNL3-210ENST00000453030 DDX11L8A8MPP1 907 aa13.11□□□□□ -0.31
GARNL3-210ENST00000453030 SLC37A4O43826 429 aa13.11□□□□□ -0.31
GARNL3-210ENST00000453030 CLASP2O75122 1294 aaKnown RBP13.11□□□□□ -0.31
GARNL3-210ENST00000453030 STBD1O95210 358 aa13.11□□□□□ -0.31
GARNL3-210ENST00000453030 DNM2P50570 870 aa13.11□□□□□ -0.31
GARNL3-210ENST00000453030 PTPN5P54829 565 aa13.11□□□□□ -0.31
GARNL3-210ENST00000453030 EVCP57679 992 aa13.11□□□□□ -0.31
GARNL3-210ENST00000453030 NPY5RQ15761 445 aa13.11□□□□□ -0.31
GARNL3-210ENST00000453030 INF2Q27J81 1249 aa13.11□□□□□ -0.31
GARNL3-210ENST00000453030 RARS2Q5T160 578 aaKnown RBP13.11□□□□□ -0.31
GARNL3-210ENST00000453030 CES5AQ6NT32 575 aa13.11□□□□□ -0.31
GARNL3-210ENST00000453030 B3GNT9Q6UX72 402 aa13.11□□□□□ -0.31
GARNL3-210ENST00000453030 CATSPER4Q7RTX7 472 aa13.11□□□□□ -0.31
GARNL3-210ENST00000453030 VPS52Q8N1B4 723 aa13.11□□□□□ -0.31
GARNL3-210ENST00000453030 MRPL43Q8N983 215 aaKnown RBP13.11□□□□□ -0.31
GARNL3-210ENST00000453030 CEP89Q96ST8 783 aa13.11□□□□□ -0.31
GARNL3-210ENST00000453030 NIFKQ9BYG3 293 aaKnown RBP13.11□□□□□ -0.31
GARNL3-210ENST00000453030 GBP3Q9H0R5 595 aa13.11□□□□□ -0.31
GARNL3-210ENST00000453030 BMP2KQ9NSY1 1161 aaPredicted RBP13.11□□□□□ -0.31
GARNL3-210ENST00000453030 SUCLA2Q9P2R7 463 aaPredicted RBP13.11□□□□□ -0.31
GARNL3-210ENST00000453030 DDX25Q9UHL0 483 aaKnown RBP13.11□□□□□ -0.31
GARNL3-210ENST00000453030 NR2E1Q9Y466 385 aa13.11□□□□□ -0.31
GARNL3-210ENST00000453030 CYP3A7-CYP3A51PA0A087WV96 503 aa13.1□□□□□ -0.31
GARNL3-210ENST00000453030 IGKV6-21A0A0C4DH24 114 aa13.1□□□□□ -0.31
GARNL3-210ENST00000453030 C2CD4DB7Z1M9 353 aa13.1□□□□□ -0.31
GARNL3-210ENST00000453030 M0R2N6 131 aa13.1□□□□□ -0.31
GARNL3-210ENST00000453030 PDGFBP01127 241 aaPredicted RBP13.1□□□□□ -0.31
GARNL3-210ENST00000453030 CYP3A7P24462 503 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms