RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 TIGD1Q96MW7 591 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 TRIM9Q9C026 710 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 ADAMTS10Q9H324 1103 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 ZMYND8Q9ULU4 1186 aaPredicted RBP13.17□□□□□ -0.3
LINC00339-205ENST00000452322 SQORQ9Y6N5 450 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 A0A087WZ62 844 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 TBCAO75347 108 aaKnown RBP13.16□□□□□ -0.3
LINC00339-205ENST00000452322 FAM13AO94988 1023 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 SYN1P17600 705 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 NAMPTP43490 491 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 DMP1Q13316 513 aaPredicted RBP13.16□□□□□ -0.3
LINC00339-205ENST00000452322 MBTPS1Q14703 1052 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 DYMQ7RTS9 669 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
LINC00339-205ENST00000452322 KSR1Q8IVT5 923 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 TMEM199Q8N511 208 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 RNF149Q8NC42 400 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 BSNDQ8WZ55 320 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 SCLYQ96I15 445 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 NLRP4Q96MN2 994 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 SCLT1Q96NL6 688 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 PPP1R16BQ96T49 567 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 OSMRQ99650 979 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 C7orf25Q9BPX7 421 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 FDXACB1Q9BRP7 624 aaPredicted RBP13.16□□□□□ -0.3
LINC00339-205ENST00000452322 NFKBIZQ9BYH8 718 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 GCOM2Q9BZD3 368 aaPredicted RBP13.16□□□□□ -0.3
LINC00339-205ENST00000452322 PARVGQ9HBI0 331 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 LARSQ9P2J5 1176 aaKnown RBP13.16□□□□□ -0.3
LINC00339-205ENST00000452322 KCNG1Q9UIX4 513 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 GINS2Q9Y248 185 aa13.16□□□□□ -0.3
LINC00339-205ENST00000452322 FRMD3A2A2Y4 597 aa13.15□□□□□ -0.3
LINC00339-205ENST00000452322 KINO60870 393 aaKnown RBP13.15□□□□□ -0.3
LINC00339-205ENST00000452322 SRGAP2CP0DJJ0 459 aa13.15□□□□□ -0.3
LINC00339-205ENST00000452322 PLS3P13797 630 aa13.15□□□□□ -0.3
LINC00339-205ENST00000452322 EIF4BP23588 611 aaKnown RBP13.15□□□□□ -0.3
LINC00339-205ENST00000452322 MCM4P33991 863 aa13.15□□□□□ -0.3
LINC00339-205ENST00000452322 AFMP43652 599 aa13.15□□□□□ -0.3
LINC00339-205ENST00000452322 PHKA2P46019 1235 aa13.15□□□□□ -0.3
LINC00339-205ENST00000452322 MLLT1Q03111 559 aaPredicted RBP13.15□□□□□ -0.3
LINC00339-205ENST00000452322 FBXO47Q5MNV8 452 aa13.15□□□□□ -0.3
LINC00339-205ENST00000452322 CDCA2Q69YH5 1023 aaPredicted RBP13.15□□□□□ -0.3
LINC00339-205ENST00000452322 ELOA2Q8IYF1 753 aaPredicted RBP13.15□□□□□ -0.3
LINC00339-205ENST00000452322 GRAMD1CQ8IYS0 662 aa13.15□□□□□ -0.3
LINC00339-205ENST00000452322 USP38Q8NB14 1042 aa13.15□□□□□ -0.3
LINC00339-205ENST00000452322 ZNF668Q96K58 619 aaPredicted RBP13.15□□□□□ -0.3
LINC00339-205ENST00000452322 INO80BQ9C086 356 aaPredicted RBP13.15□□□□□ -0.3
LINC00339-205ENST00000452322 CDHR5Q9HBB8 845 aa13.15□□□□□ -0.3
LINC00339-205ENST00000452322 IFT122Q9HBG6 1241 aa13.15□□□□□ -0.3
LINC00339-205ENST00000452322 POLD4Q9HCU8 107 aa13.15□□□□□ -0.3
LINC00339-205ENST00000452322 DACT1Q9NYF0 836 aa13.15□□□□□ -0.3
LINC00339-205ENST00000452322 MYH11P35749 1972 aa13.15□□□□□ -0.31
LINC00339-205ENST00000452322 LRRIQ4A6NIV6 560 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 SFI1A8K8P3 1242 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 GTPBP6O43824 516 aaPredicted RBP13.14□□□□□ -0.31
LINC00339-205ENST00000452322 NBNO60934 754 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 CXCL10P02778 98 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 GHRP10912 638 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 DARSP14868 501 aaKnown RBP13.14□□□□□ -0.31
LINC00339-205ENST00000452322 GAP43P17677 238 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 PEX3P56589 373 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 PTENP60484 403 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 ASIC1P78348 528 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 CUL4BQ13620 913 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 LPIN1Q14693 890 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 GPNMBQ14956 572 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 TSHZ1Q6ZSZ6 1077 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 SRGAP1Q7Z6B7 1085 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 ZBTB8OSQ8IWT0 167 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 CCDC65Q8IXS2 484 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 DEPTORQ8TB45 409 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 TMEM40Q8WWA1 233 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 SPIRE2Q8WWL2 714 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 BADQ92934 168 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 NTPCRQ9BSD7 190 aaKnown RBP13.14□□□□□ -0.31
LINC00339-205ENST00000452322 C2orf40Q9H1Z8 148 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 BLZF1Q9H2G9 400 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 SEL1LQ9UBV2 794 aa13.14□□□□□ -0.31
LINC00339-205ENST00000452322 SCN5AQ14524 2016 aa13.13□□□□□ -0.31
LINC00339-205ENST00000452322 PVALEFA0A1B0GWK0 134 aa13.13□□□□□ -0.31
LINC00339-205ENST00000452322 RPS6KA5O75582 802 aa13.13□□□□□ -0.31
LINC00339-205ENST00000452322 PFKMP08237 780 aa13.13□□□□□ -0.31
LINC00339-205ENST00000452322 IDEP14735 1019 aa13.13□□□□□ -0.31
LINC00339-205ENST00000452322 CSF2RAP15509 400 aa13.13□□□□□ -0.31
LINC00339-205ENST00000452322 CASP1P29466 404 aa13.13□□□□□ -0.31
LINC00339-205ENST00000452322 NPTX2P47972 431 aa13.13□□□□□ -0.31
LINC00339-205ENST00000452322 SMTNP53814 917 aa13.13□□□□□ -0.31
LINC00339-205ENST00000452322 FPGSQ05932 587 aa13.13□□□□□ -0.31
LINC00339-205ENST00000452322 PPIGQ13427 754 aaKnown RBP eCLIP13.13□□□□□ -0.31
LINC00339-205ENST00000452322 POSTNQ15063 836 aa13.13□□□□□ -0.31
LINC00339-205ENST00000452322 PCBP1Q15365 356 aaKnown RBP eCLIP13.13□□□□□ -0.31
LINC00339-205ENST00000452322 ODR4Q5SWX8 454 aa13.13□□□□□ -0.31
LINC00339-205ENST00000452322 UNC13DQ70J99 1090 aa13.13□□□□□ -0.31
LINC00339-205ENST00000452322 RPUSD2Q8IZ73 545 aaKnown RBP13.13□□□□□ -0.31
LINC00339-205ENST00000452322 MYCT1Q8N699 235 aa13.13□□□□□ -0.31
LINC00339-205ENST00000452322 LBHD1Q9BQE6 289 aaPredicted RBP13.13□□□□□ -0.31
LINC00339-205ENST00000452322 ZHX3Q9H4I2 956 aa13.13□□□□□ -0.31
LINC00339-205ENST00000452322 KMT5AQ9NQR1 393 aa13.13□□□□□ -0.31
LINC00339-205ENST00000452322 OLFML3Q9NRN5 406 aa13.13□□□□□ -0.31
LINC00339-205ENST00000452322 PANK4Q9NVE7 773 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms