RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 BRMS1Q9HCU9 246 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 ALG13Q9NP73 1137 aaKnown RBP9.75□□□□□ -0.85
RFX3-209ENST00000451859 COG5Q9UP83 839 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 PCDHB7Q9Y5E2 793 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 MYH11P35749 1972 aa9.74□□□□□ -0.85
RFX3-209ENST00000451859 TBKBP1A7MCY6 615 aa9.74□□□□□ -0.85
RFX3-209ENST00000451859 TNFRSF10AO00220 468 aa9.74□□□□□ -0.85
RFX3-209ENST00000451859 GPR182O15218 404 aa9.74□□□□□ -0.85
RFX3-209ENST00000451859 GPR32O75388 356 aa9.74□□□□□ -0.85
RFX3-209ENST00000451859 CSDE1O75534 798 aaKnown RBP9.74□□□□□ -0.85
RFX3-209ENST00000451859 BMP1P13497 986 aa9.74□□□□□ -0.85
RFX3-209ENST00000451859 BMPR1AP36894 532 aa9.74□□□□□ -0.85
RFX3-209ENST00000451859 SARSP49591 514 aaKnown RBP9.74□□□□□ -0.85
RFX3-209ENST00000451859 TRIM29Q14134 588 aa9.74□□□□□ -0.85
RFX3-209ENST00000451859 TIGD5Q53EQ6 642 aa9.74□□□□□ -0.85
RFX3-209ENST00000451859 TCEAL5Q5H9L2 206 aa9.74□□□□□ -0.85
RFX3-209ENST00000451859 ODR4Q5SWX8 454 aa9.74□□□□□ -0.85
RFX3-209ENST00000451859 FAM102BQ5T8I3 360 aa9.74□□□□□ -0.85
RFX3-209ENST00000451859 CCDC83Q8IWF9 413 aa9.74□□□□□ -0.85
RFX3-209ENST00000451859 CMTR2Q8IYT2 770 aaKnown RBP9.74□□□□□ -0.85
RFX3-209ENST00000451859 FAM177A1Q8N128 213 aaPredicted RBP9.74□□□□□ -0.85
RFX3-209ENST00000451859 RDM1Q8NG50 284 aa9.74□□□□□ -0.85
RFX3-209ENST00000451859 NLRP7Q8WX94 980 aa9.74□□□□□ -0.85
RFX3-209ENST00000451859 ZNF689Q96CS4 500 aaPredicted RBP9.74□□□□□ -0.85
RFX3-209ENST00000451859 C11orf84Q9BUA3 381 aaPredicted RBP9.74□□□□□ -0.85
RFX3-209ENST00000451859 UBE2ZQ9H832 354 aaPredicted RBP9.74□□□□□ -0.85
RFX3-209ENST00000451859 VAV3Q9UKW4 847 aa9.74□□□□□ -0.85
RFX3-209ENST00000451859 RWDD3Q9Y3V2 267 aa9.74□□□□□ -0.85
RFX3-209ENST00000451859 H3BQ06 376 aaPredicted RBP9.73□□□□□ -0.85
RFX3-209ENST00000451859 EIF5BO60841 1220 aaKnown RBP9.73□□□□□ -0.85
RFX3-209ENST00000451859 LINC00271P0C7V0 271 aa9.73□□□□□ -0.85
RFX3-209ENST00000451859 FGFR1P11362 822 aa9.73□□□□□ -0.85
RFX3-209ENST00000451859 GCFC2P16383 781 aaKnown RBP9.73□□□□□ -0.85
RFX3-209ENST00000451859 ATP2B1P20020 1258 aa9.73□□□□□ -0.85
RFX3-209ENST00000451859 GPC3P51654 580 aa9.73□□□□□ -0.85
RFX3-209ENST00000451859 CYP4A11Q02928 519 aa9.73□□□□□ -0.85
RFX3-209ENST00000451859 ST3GAL1Q11201 340 aa9.73□□□□□ -0.85
RFX3-209ENST00000451859 XKR3Q5GH77 459 aa9.73□□□□□ -0.85
RFX3-209ENST00000451859 ZNF787Q6DD87 383 aa9.73□□□□□ -0.85
RFX3-209ENST00000451859 B3GNT9Q6UX72 402 aa9.73□□□□□ -0.85
RFX3-209ENST00000451859 SLC24A5Q71RS6 500 aa9.73□□□□□ -0.85
RFX3-209ENST00000451859 DIS3L2Q8IYB7 885 aaKnown RBP9.73□□□□□ -0.85
RFX3-209ENST00000451859 LINC01465Q8N7H1 131 aa9.73□□□□□ -0.85
RFX3-209ENST00000451859 CLP1Q92989 425 aaKnown RBP9.73□□□□□ -0.85
RFX3-209ENST00000451859 MTRQ99707 1265 aa9.73□□□□□ -0.85
RFX3-209ENST00000451859 ADAMTS10Q9H324 1103 aa9.73□□□□□ -0.85
RFX3-209ENST00000451859 NSUN3Q9H649 340 aaKnown RBP9.73□□□□□ -0.85
RFX3-209ENST00000451859 IGFLR1Q9H665 355 aa9.73□□□□□ -0.85
RFX3-209ENST00000451859 KCNMB3Q9NPA1 279 aa9.73□□□□□ -0.85
RFX3-209ENST00000451859 RGS18Q9NS28 235 aa9.73□□□□□ -0.85
RFX3-209ENST00000451859 C1orf112Q9NSG2 853 aa9.73□□□□□ -0.85
RFX3-209ENST00000451859 CLDND1Q9NY35 253 aa9.73□□□□□ -0.85
RFX3-209ENST00000451859 TRIP11Q15643 1979 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 BTBD18B2RXH4 712 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 C9IYK1 514 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 C5orf67F2Z3F1 127 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 WNT7AO00755 349 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 STBD1O95210 358 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 MMP1P03956 469 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 RB1P06400 928 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 ZSCAN20P17040 1043 aaPredicted RBP9.72□□□□□ -0.85
RFX3-209ENST00000451859 EIF4BP23588 611 aaKnown RBP9.72□□□□□ -0.85
RFX3-209ENST00000451859 QARSP47897 775 aaKnown RBP9.72□□□□□ -0.85
RFX3-209ENST00000451859 DNM2P50570 870 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 NPEPPSP55786 919 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 PSMC5P62195 406 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 PPP2R5CQ13362 524 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 CTTNQ14247 550 aaKnown RBP9.72□□□□□ -0.85
RFX3-209ENST00000451859 TARBP2Q15633 366 aaKnown RBP9.72□□□□□ -0.85
RFX3-209ENST00000451859 CLUL1Q15846 466 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 PPP4R3AQ6IN85 833 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 ANO5Q75V66 913 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 RHPN2Q8IUC4 686 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 KSR1Q8IVT5 923 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 CRIPAKQ8N1N5 446 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 KLHL23Q8NBE8 558 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 HAS1Q92839 578 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 DYDC2Q96IM9 177 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 FAM20AQ96MK3 541 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 NLRP4Q96MN2 994 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 NAP1L4Q99733 375 aaKnown RBP9.72□□□□□ -0.85
RFX3-209ENST00000451859 LXNQ9BS40 222 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 NIFKQ9BYG3 293 aaKnown RBP9.72□□□□□ -0.85
RFX3-209ENST00000451859 ATP6V0A4Q9HBG4 840 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 RGL1Q9NZL6 768 aa9.72□□□□□ -0.85
RFX3-209ENST00000451859 WRAP73Q9P2S5 460 aaPredicted RBP9.72□□□□□ -0.85
RFX3-209ENST00000451859 A0A087WZ62 844 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 DPYSL4O14531 572 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 NEMFO60524 1076 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 MAFO75444 373 aaPredicted RBP9.71□□□□□ -0.86
RFX3-209ENST00000451859 BAG4O95429 457 aaKnown RBP9.71□□□□□ -0.86
RFX3-209ENST00000451859 ITGB1P05556 798 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 DARSP14868 501 aaKnown RBP9.71□□□□□ -0.86
RFX3-209ENST00000451859 IL9P15248 144 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 DNAJB1P25685 340 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 GTF2F1P35269 517 aaKnown RBP eCLIP9.71□□□□□ -0.86
RFX3-209ENST00000451859 POLGP54098 1239 aaPredicted RBP9.71□□□□□ -0.86
RFX3-209ENST00000451859 DSC3Q14574 896 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 CALCRLQ16602 461 aa9.71□□□□□ -0.86
RFX3-209ENST00000451859 LONRF3Q496Y0 759 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms