RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 EXOC3O60645 756 aa13.15□□□□□ -0.3
COL27A1-202ENST00000451716 CAND2O75155 1236 aa13.15□□□□□ -0.3
COL27A1-202ENST00000451716 P4HBP07237 508 aaKnown RBP13.15□□□□□ -0.3
COL27A1-202ENST00000451716 ALKBH5Q6P6C2 394 aaKnown RBP13.15□□□□□ -0.3
COL27A1-202ENST00000451716 LPAR1Q92633 364 aa13.15□□□□□ -0.3
COL27A1-202ENST00000451716 ATG4CQ96DT6 458 aa13.15□□□□□ -0.3
COL27A1-202ENST00000451716 RMDN3Q96TC7 470 aa13.15□□□□□ -0.3
COL27A1-202ENST00000451716 LUC7LQ9NQ29 371 aaKnown RBP13.15□□□□□ -0.3
COL27A1-202ENST00000451716 NAGPAQ9UK23 515 aa13.15□□□□□ -0.3
COL27A1-202ENST00000451716 ODF2LQ9ULJ1 636 aa13.15□□□□□ -0.3
COL27A1-202ENST00000451716 FRMD4BQ9Y2L6 1034 aa13.15□□□□□ -0.3
COL27A1-202ENST00000451716 GRID2IPA4D2P6 1211 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 SORBS3O60504 671 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 FMO5P49326 533 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 NPEPPSP55786 919 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 DLG4P78352 724 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 ANKRD23Q86SG2 305 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 MCF2L2Q86YR7 1114 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 PAIP2Q9BPZ3 127 aaKnown RBP13.14□□□□□ -0.31
COL27A1-202ENST00000451716 VPS33BQ9H267 617 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 PPP1R9AQ9ULJ8 1098 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 UBIAD1Q9Y5Z9 338 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 TMCO5BA8MYB1 307 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 PPP1R12BO60237 982 aaPredicted RBP13.14□□□□□ -0.31
COL27A1-202ENST00000451716 PRLRP16471 622 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 RARRES1P49788 294 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 JAM2P57087 298 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 TNFAIP1Q13829 316 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 TNIP1Q15025 636 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 PGM5Q15124 567 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 PLA2G4FQ68DD2 849 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 SRLQ86TD4 932 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 KCTD17Q8N5Z5 321 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 VPS18Q9P253 973 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 SEL1LQ9UBV2 794 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 CNOT7Q9UIV1 285 aaKnown RBP13.14□□□□□ -0.31
COL27A1-202ENST00000451716 CTNND1O60716 968 aaKnown RBP13.14□□□□□ -0.31
COL27A1-202ENST00000451716 BCRP11274 1271 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 ARHGAP44Q17R89 818 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 C1QTNF12Q5T7M4 302 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 PCNX4Q63HM2 1172 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 TXLNBQ8N3L3 684 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 FAM210AQ96ND0 272 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 CBWD1Q9BRT8 395 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 DMAC2Q9NW81 257 aa13.14□□□□□ -0.31
COL27A1-202ENST00000451716 ATAD5Q96QE3 1844 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 FER1L6Q2WGJ9 1857 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 TARSL2A2RTX5 802 aaKnown RBP13.13□□□□□ -0.31
COL27A1-202ENST00000451716 EVI5O60447 810 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 TUBBP07437 444 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 YWHABP31946 246 aaKnown RBP13.13□□□□□ -0.31
COL27A1-202ENST00000451716 PAFAH1B1P43034 410 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 QARSP47897 775 aaKnown RBP13.13□□□□□ -0.31
COL27A1-202ENST00000451716 ZNF280AP59817 542 aaPredicted RBP13.13□□□□□ -0.31
COL27A1-202ENST00000451716 CCNI2Q6ZMN8 369 aaPredicted RBP13.13□□□□□ -0.31
COL27A1-202ENST00000451716 RNF207Q6ZRF8 634 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 U2AF1L4Q8WU68 220 aaKnown RBP13.13□□□□□ -0.31
COL27A1-202ENST00000451716 RIN2Q8WYP3 895 aaPredicted RBP13.13□□□□□ -0.31
COL27A1-202ENST00000451716 DNAJC12Q9UKB3 198 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 FAN1Q9Y2M0 1017 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 RRP15Q9Y3B9 282 aaKnown RBP13.13□□□□□ -0.31
COL27A1-202ENST00000451716 TELO2Q9Y4R8 837 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 DDX3XO00571 662 aaKnown RBP eCLIP13.13□□□□□ -0.31
COL27A1-202ENST00000451716 BACH1O14867 736 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 PPP1R37O75864 691 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 CCNE2O96020 404 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 SP4Q02446 784 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 BAATQ14032 418 aaPredicted RBP13.13□□□□□ -0.31
COL27A1-202ENST00000451716 DRAP1Q14919 205 aaPredicted RBP13.13□□□□□ -0.31
COL27A1-202ENST00000451716 RINLQ6ZS11 566 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 STXBP4Q6ZWJ1 553 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 GLYCTKQ8IVS8 523 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 MMGT1Q8N4V1 131 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 SLC16A10Q8TF71 515 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 CCDC43Q96MW1 224 aaKnown RBP13.13□□□□□ -0.31
COL27A1-202ENST00000451716 KIFC3Q9BVG8 833 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 KCND2Q9NZV8 630 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 PCDHGC5Q9Y5F6 944 aa13.13□□□□□ -0.31
COL27A1-202ENST00000451716 VWA5AO00534 786 aa13.12□□□□□ -0.31
COL27A1-202ENST00000451716 SLC16A4O15374 487 aa13.12□□□□□ -0.31
COL27A1-202ENST00000451716 MUTP22033 750 aa13.12□□□□□ -0.31
COL27A1-202ENST00000451716 PEX3P56589 373 aa13.12□□□□□ -0.31
COL27A1-202ENST00000451716 SOX10P56693 466 aa13.12□□□□□ -0.31
COL27A1-202ENST00000451716 MEI1Q5TIA1 1274 aa13.12□□□□□ -0.31
COL27A1-202ENST00000451716 ARHGEF16Q5VV41 709 aa13.12□□□□□ -0.31
COL27A1-202ENST00000451716 PDCD2LQ9BRP1 358 aa13.12□□□□□ -0.31
COL27A1-202ENST00000451716 STRA6Q9BX79 667 aa13.12□□□□□ -0.31
COL27A1-202ENST00000451716 IRAK4Q9NWZ3 460 aa13.12□□□□□ -0.31
COL27A1-202ENST00000451716 LARSQ9P2J5 1176 aaKnown RBP13.12□□□□□ -0.31
COL27A1-202ENST00000451716 ZSCAN5CA6NGD5 496 aaPredicted RBP13.12□□□□□ -0.31
COL27A1-202ENST00000451716 EIF3JO75822 258 aaKnown RBP13.12□□□□□ -0.31
COL27A1-202ENST00000451716 HMGCS2P54868 508 aa13.12□□□□□ -0.31
COL27A1-202ENST00000451716 TGFB2P61812 414 aa13.12□□□□□ -0.31
COL27A1-202ENST00000451716 BFSP1Q12934 665 aa13.12□□□□□ -0.31
COL27A1-202ENST00000451716 PRKG1Q13976 671 aa13.12□□□□□ -0.31
COL27A1-202ENST00000451716 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.12□□□□□ -0.31
COL27A1-202ENST00000451716 WRNIP1Q96S55 665 aa13.12□□□□□ -0.31
COL27A1-202ENST00000451716 SELENOOQ9BVL4 669 aa13.12□□□□□ -0.31
COL27A1-202ENST00000451716 INTS2Q9H0H0 1204 aaKnown RBP13.12□□□□□ -0.31
COL27A1-202ENST00000451716 PXMP2Q9NR77 195 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms