RNA–Protein interactions for RNA: ENST00000451349.1

SSXP4-201, Transcript of SSX family pseudogene 4, humanhuman

BASIC

Gene SSXP4, Length 245 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP4-201ENST00000451349 METTL24Q5JXM2 366 aa3.88□□□□□ -1.79
SSXP4-201ENST00000451349 CFAP58Q5T655 872 aa3.88□□□□□ -1.79
SSXP4-201ENST00000451349 IFIT1BQ5T764 474 aaKnown RBP3.88□□□□□ -1.79
SSXP4-201ENST00000451349 PLBD1Q6P4A8 553 aa3.88□□□□□ -1.79
SSXP4-201ENST00000451349 ABRAXAS1Q6UWZ7 409 aa3.88□□□□□ -1.79
SSXP4-201ENST00000451349 BTN2A1Q7KYR7 527 aa3.88□□□□□ -1.79
SSXP4-201ENST00000451349 MCM10Q7L590 875 aa3.88□□□□□ -1.79
SSXP4-201ENST00000451349 RASGRP2Q7LDG7 609 aa3.88□□□□□ -1.79
SSXP4-201ENST00000451349 TMEM192Q8IY95 271 aa3.88□□□□□ -1.79
SSXP4-201ENST00000451349 CCDC144CPQ8IYA2 1237 aa3.88□□□□□ -1.79
SSXP4-201ENST00000451349 TEX11Q8IYF3 940 aa3.88□□□□□ -1.79
SSXP4-201ENST00000451349 ZNF655Q8N720 491 aaPredicted RBP3.88□□□□□ -1.79
SSXP4-201ENST00000451349 DAGLBQ8NCG7 672 aa3.88□□□□□ -1.79
SSXP4-201ENST00000451349 SYTL5Q8TDW5 730 aaPredicted RBP3.88□□□□□ -1.79
SSXP4-201ENST00000451349 IPCEF1Q8WWN9 437 aaPredicted RBP3.88□□□□□ -1.79
SSXP4-201ENST00000451349 LTV1Q96GA3 475 aaPredicted RBP3.88□□□□□ -1.79
SSXP4-201ENST00000451349 UBXN10Q96LJ8 280 aa3.88□□□□□ -1.79
SSXP4-201ENST00000451349 MPHOSPH8Q99549 860 aa3.88□□□□□ -1.79
SSXP4-201ENST00000451349 ZWILCHQ9H900 591 aa3.88□□□□□ -1.79
SSXP4-201ENST00000451349 RAI14Q9P0K7 980 aa3.88□□□□□ -1.79
SSXP4-201ENST00000451349 CPSF2Q9P2I0 782 aaKnown RBP3.88□□□□□ -1.79
SSXP4-201ENST00000451349 CFDP1Q9UEE9 299 aaPredicted RBP3.88□□□□□ -1.79
SSXP4-201ENST00000451349 TMEM59LQ9UK28 342 aa3.88□□□□□ -1.79
SSXP4-201ENST00000451349 SMG5Q9UPR3 1016 aaKnown RBP3.88□□□□□ -1.79
SSXP4-201ENST00000451349 RRP15Q9Y3B9 282 aaKnown RBP3.88□□□□□ -1.79
SSXP4-201ENST00000451349 PCDHB12Q9Y5F1 795 aa3.88□□□□□ -1.79
SSXP4-201ENST00000451349 PCDHA11Q9Y5I1 949 aa3.88□□□□□ -1.79
SSXP4-201ENST00000451349 MRFAP1Q9Y605 127 aa3.88□□□□□ -1.79
SSXP4-201ENST00000451349 SHISA3A0PJX4 238 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 FAM83GA6ND36 823 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 TMEM110-MUSTN1A8MSY1 372 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 RASA4BC9J798 803 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 INO80B-WBP1J3KQ70 363 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 EYA2O00167 538 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 TPP1O14773 563 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 RASA4O43374 803 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 KPNA6O60684 536 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 PQBP1O60828 265 aaKnown RBP3.87□□□□□ -1.79
SSXP4-201ENST00000451349 SKAP2O75563 359 aaPredicted RBP3.87□□□□□ -1.79
SSXP4-201ENST00000451349 MT-CO1P00395 513 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 CFBP00751 764 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 CCDC175P0C221 793 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 STMN1P16949 149 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 MUTP22033 750 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 RPL10P27635 214 aaKnown RBP3.87□□□□□ -1.79
SSXP4-201ENST00000451349 HPDP32754 393 aaPredicted RBP3.87□□□□□ -1.79
SSXP4-201ENST00000451349 SCNN1BP51168 640 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 ATXN1P54253 815 aaKnown RBP3.87□□□□□ -1.79
SSXP4-201ENST00000451349 SH3BGRP55822 239 aaPredicted RBP3.87□□□□□ -1.79
SSXP4-201ENST00000451349 PCBP3P57721 371 aaKnown RBP3.87□□□□□ -1.79
SSXP4-201ENST00000451349 KRTAP10-2P60368 255 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 SUMO1P63165 101 aaKnown RBP3.87□□□□□ -1.79
SSXP4-201ENST00000451349 UBXN2AP68543 259 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 MAP2K1Q02750 393 aaPredicted RBP3.87□□□□□ -1.79
SSXP4-201ENST00000451349 DUSP4Q13115 394 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 AUHQ13825 339 aaKnown RBP3.87□□□□□ -1.79
SSXP4-201ENST00000451349 BLMHQ13867 455 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 SEPT7Q16181 437 aaKnown RBP3.87□□□□□ -1.79
SSXP4-201ENST00000451349 CCDC38Q502W7 563 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 FAM209AQ5JX71 171 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 ARMC4Q5T2S8 1044 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 FOXB2Q5VYV0 432 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 CDCA2Q69YH5 1023 aaPredicted RBP3.87□□□□□ -1.79
SSXP4-201ENST00000451349 VHLLQ6RSH7 139 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 RNF111Q6ZNA4 994 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 NEK10Q6ZWH5 1172 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 UBE2R2Q712K3 238 aaPredicted RBP3.87□□□□□ -1.79
SSXP4-201ENST00000451349 PDZD4Q76G19 769 aaPredicted RBP3.87□□□□□ -1.79
SSXP4-201ENST00000451349 TMC3Q7Z5M5 1100 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 SCUBE1Q8IWY4 988 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 CMTR2Q8IYT2 770 aaKnown RBP3.87□□□□□ -1.79
SSXP4-201ENST00000451349 OXR1Q8N573 874 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 SLC30A5Q8TAD4 765 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 TCTN2Q96GX1 697 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 SPATA17Q96L03 361 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 DIRC2Q96SL1 478 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 BAG1Q99933 345 aaPredicted RBP3.87□□□□□ -1.79
SSXP4-201ENST00000451349 TREX2Q9BQ50 279 aaPredicted RBP3.87□□□□□ -1.79
SSXP4-201ENST00000451349 CHCHD6Q9BRQ6 235 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 ADPGKQ9BRR6 497 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 C22orf23Q9BZE7 217 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 PRDM14Q9GZV8 571 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 RNF38Q9H0F5 515 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 VPS11Q9H270 941 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 SLC12A5Q9H2X9 1139 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 ADAMTS10Q9H324 1103 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 ELAC1Q9H777 363 aaKnown RBP3.87□□□□□ -1.79
SSXP4-201ENST00000451349 BRD9Q9H8M2 597 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 RSAD1Q9HA92 442 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 DCP1AQ9NPI6 582 aaPredicted RBP3.87□□□□□ -1.79
SSXP4-201ENST00000451349 FNIP2Q9P278 1114 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 MTRRQ9UBK8 725 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 TBK1Q9UHD2 729 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 DNM3Q9UQ16 869 aa3.87□□□□□ -1.79
SSXP4-201ENST00000451349 FSD2A1L4K1 749 aa3.86□□□□□ -1.79
SSXP4-201ENST00000451349 FRS3O43559 492 aa3.86□□□□□ -1.79
SSXP4-201ENST00000451349 SIGLEC6O43699 453 aa3.86□□□□□ -1.79
SSXP4-201ENST00000451349 ULK1O75385 1050 aa3.86□□□□□ -1.79
SSXP4-201ENST00000451349 OFD1O75665 1012 aa3.86□□□□□ -1.79
SSXP4-201ENST00000451349 PRAMEF1O95521 474 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms