RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 E2F6O75461 281 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 ASLP04424 464 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 UBTFL6P0CB48 400 aaPredicted RBP9.28□□□□□ -0.92
LSM5-208ENST00000450169 ETS2P15036 469 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 MAP7Q14244 749 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 LIN52Q52LA3 116 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 CGB2Q6NT52 195 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 ZNF530Q6P9A1 599 aaPredicted RBP9.28□□□□□ -0.92
LSM5-208ENST00000450169 BTNL9Q6UXG8 535 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 SMYD1Q8NB12 490 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 SLC35B4Q969S0 331 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 NR1H4Q96RI1 486 aaPredicted RBP9.28□□□□□ -0.92
LSM5-208ENST00000450169 TGS1Q96RS0 853 aaKnown RBP9.28□□□□□ -0.92
LSM5-208ENST00000450169 TMEM109Q9BVC6 243 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 EDEM3Q9BZQ6 932 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 RANBP17Q9H2T7 1088 aaKnown RBP9.28□□□□□ -0.92
LSM5-208ENST00000450169 GOLPH3Q9H4A6 298 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 VRTNQ9H8Y1 702 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 AIPL1Q9NZN9 384 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 TUBGCP4Q9UGJ1 667 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 CHMP2BQ9UQN3 213 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 USH1CQ9Y6N9 552 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 LMO7Q8WWI1 1683 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 LMTK3Q96Q04 1460 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.28□□□□□ -0.92
LSM5-208ENST00000450169 TPD52L2O43399 206 aaKnown RBP9.28□□□□□ -0.92
LSM5-208ENST00000450169 HNRNPCP07910 306 aaKnown RBP eCLIP9.28□□□□□ -0.92
LSM5-208ENST00000450169 LYNP07948 512 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 MCM7P33993 719 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 LONP1P36776 959 aaKnown RBP9.28□□□□□ -0.92
LSM5-208ENST00000450169 IGHMBP2P38935 993 aaKnown RBP9.28□□□□□ -0.92
LSM5-208ENST00000450169 ZAP70P43403 619 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 RASSF2P50749 326 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 KLRC3Q07444 240 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 AUHQ13825 339 aaKnown RBP9.28□□□□□ -0.92
LSM5-208ENST00000450169 SCARF1Q14162 830 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 WTAPQ15007 396 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 RCN1Q15293 331 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 MAN2A1Q16706 1144 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 PTPROQ16827 1216 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 TUSC1Q2TAM9 212 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 P3H1Q32P28 736 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 LRRC24Q50LG9 513 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 NAALADL2Q58DX5 795 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 PI16Q6UXB8 463 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 LRRC74BQ6ZQY2 392 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 DAAM2Q86T65 1068 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 FANCBQ8NB91 859 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 PPFIBP2Q8ND30 876 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 PRR7Q8TB68 274 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 CERKQ8TCT0 537 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 C17orf50Q8WW18 174 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 NRG4Q8WWG1 115 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 CKAP2Q8WWK9 683 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 PPP1R14BQ96C90 147 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 ZNF653Q96CK0 615 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 TSPAN18Q96SJ8 248 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.28□□□□□ -0.92
LSM5-208ENST00000450169 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.28□□□□□ -0.92
LSM5-208ENST00000450169 KIAA1683Q9H0B3 1180 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 DHX36Q9H2U1 1008 aaKnown RBP9.28□□□□□ -0.92
LSM5-208ENST00000450169 CUEDC2Q9H467 287 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 PCDH18Q9HCL0 1135 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 NLRC4Q9NPP4 1024 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 DBR1Q9UK59 544 aaKnown RBP9.28□□□□□ -0.92
LSM5-208ENST00000450169 RPTORQ8N122 1335 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 A0A087X0T9 212 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 BTNL10A8MVZ5 291 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 EYA2O00167 538 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 TLR2O60603 784 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 PRDM1O75626 825 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 EYA4O95677 639 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 ITGA2BP08514 1039 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 FAM228BP0C875 321 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 ZCCHC18P0CG32 403 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 ZBTB48P10074 688 aaPredicted RBP9.27□□□□□ -0.93
LSM5-208ENST00000450169 POLGP54098 1239 aaPredicted RBP9.27□□□□□ -0.93
LSM5-208ENST00000450169 PLTPP55058 493 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 RTP1P59025 263 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 POU5F1Q01860 360 aaKnown RBP9.27□□□□□ -0.93
LSM5-208ENST00000450169 GIT2Q14161 759 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 MTFR1Q15390 333 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 KHDC1Q4VXA5 237 aaKnown RBP9.27□□□□□ -0.93
LSM5-208ENST00000450169 MFSD5Q6N075 450 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 ANKRD13DQ6ZTN6 518 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 ARHGAP27Q6ZUM4 889 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 FAM47EQ6ZV65 393 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 MIGA2Q7L4E1 593 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 RASGEF1CQ8N431 466 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 UHMK1Q8TAS1 419 aaKnown RBP9.27□□□□□ -0.93
LSM5-208ENST00000450169 GDAP1Q8TB36 358 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 SYN2Q92777 582 aaPredicted RBP9.27□□□□□ -0.93
LSM5-208ENST00000450169 KHSRPQ92945 711 aaKnown RBP eCLIP9.27□□□□□ -0.93
LSM5-208ENST00000450169 TNFRSF25Q93038 417 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 GRAMD1AQ96CP6 724 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 SLC7A6OSQ96CW6 309 aaPredicted RBP9.27□□□□□ -0.93
LSM5-208ENST00000450169 CLMNQ96JQ2 1002 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 OLFM3Q96PB7 478 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 LRRC37BQ96QE4 947 aa9.27□□□□□ -0.93
LSM5-208ENST00000450169 DDX50Q9BQ39 737 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms