RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-208	ENST00000447995	FMR1	Q06787	632 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	PAK1	Q13153	545 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	CUL4B	Q13620	913 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	KCNB1	Q14721	858 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	IFI16	Q16666	785 aa	Known RBP	4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	ASPRV1	Q53RT3	343 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	EARS2	Q5JPH6	523 aa	Known RBP	4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	MFSD14B	Q5SR56	506 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	ZNF658	Q5TYW1	1059 aa	Predicted RBP	4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	CDKAL1	Q5VV42	579 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	RRAGB	Q5VZM2	374 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	E4F1	Q66K89	784 aa	Predicted RBP	4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	WWC2	Q6AWC2	1192 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	PTF1A	Q7RTS3	328 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	HEATR3	Q7Z4Q2	680 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	CNGA4	Q8IV77	575 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	MAPKAPK5	Q8IW41	473 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	SP8	Q8IXZ3	490 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	GRAMD1C	Q8IYS0	662 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	FLAD1	Q8NFF5	587 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	TBC1D16	Q8TBP0	767 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	TMEM40	Q8WWA1	233 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	ANKRD7	Q92527	254 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	SHISA4	Q96DD7	197 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	DYNLL2	Q96FJ2	89 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	PPP1R13B	Q96KQ4	1090 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	FEZ1	Q99689	392 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	NAP1L4	Q99733	375 aa	Known RBP	4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	BAG1	Q99933	345 aa	Predicted RBP	4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	TRAIP	Q9BWF2	469 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	RAB34	Q9BZG1	259 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	CCSER1	Q9C0I3	900 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	LRRC27	Q9C0I9	530 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	ZMYND12	Q9H0C1	365 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	GLT8D2	Q9H1C3	349 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	TMX1	Q9H3N1	280 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	DISC1	Q9NRI5	854 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	IL17RB	Q9NRM6	502 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	SWAP70	Q9UH65	585 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	MAD2L2	Q9UI95	211 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	RWDD2A	Q9UIY3	292 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	VAV3	Q9UKW4	847 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	PCDHA6	Q9UN73	950 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	CTNND2	Q9UQB3	1225 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	JAG2	Q9Y219	1238 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	PCDHA8	Q9Y5H6	950 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	MYH6	P13533	1939 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	BAZ2A	Q9UIF9	1905 aa	Known RBP	4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	MYH2	Q9UKX2	1941 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995		A0A087X0B3	334 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	BICDL2	A1A5D9	508 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	USP27X	A6NNY8	438 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995		H7C1D1	291 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	SMIM22	K7EJ46	135 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	POLRMT	O00411	1230 aa	Known RBP	4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	PSMA7	O14818	248 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	SLC26A4	O43511	780 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	CPNE3	O75131	537 aa	Known RBP	4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	RPN1	P04843	607 aa	Known RBP	4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	HLA-DOA	P06340	250 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	CCDC175	P0C221	793 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	OR52Z1	P0C646	297 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	NPR1	P16066	1061 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	EEF1G	P26641	437 aa	Known RBP	4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	ALDH1B1	P30837	517 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	PDE6B	P35913	854 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	NOV	P48745	357 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	ADCY7	P51828	1080 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	RHBDL3	P58872	404 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	TUBB4B	P68371	445 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	TUBB2A	Q13885	445 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	TTLL4	Q14679	1199 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	NR1I3	Q14994	352 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	ZNF827	Q17R98	1081 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	TMEM266	Q2M3C6	531 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	FBLN7	Q53RD9	439 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	MCTP2	Q6DN12	878 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	KLHL10	Q6JEL2	608 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	SYT10	Q6XYQ8	523 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	USP49	Q70CQ1	688 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	SMIM5	Q71RC9	77 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	NEK8	Q86SG6	692 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	AMIGO3	Q86WK7	504 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	FAM114A1	Q8IWE2	563 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	SMYD4	Q8IYR2	804 aa	Predicted RBP	4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	REXO1	Q8N1G1	1221 aa	Known RBP	4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	NLGN1	Q8N2Q7	840 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	C4orf32	Q8N8J7	132 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	IGSF22	Q8N9C0	903 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	MNS1	Q8NEH6	495 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	ZNF397	Q8NF99	534 aa	Predicted RBP	4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	DPF2	Q92785	391 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	IQCD	Q96DY2	449 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	CALML4	Q96GE6	196 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	HRASLS5	Q96KN8	279 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	CCDC17	Q96LX7	622 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	TUBB2B	Q9BVA1	445 aa		4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	ZC3H12C	Q9C0D7	883 aa	Known RBP	4.53	□□□□□ -1.68
PTPN12-208	ENST00000447995	THAP9	Q9H5L6	903 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms