RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 LIMCH1Q9UPQ0 1083 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 CRYL1Q9Y2S2 319 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 SLC45A1Q9Y2W3 748 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 AFG3L2Q9Y4W6 797 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 NR2E3Q9Y5X4 410 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 ATP23Q9Y6H3 246 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 ST20-MTHFSA0A0A6YYL1 179 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 EIF3FO00303 357 aaPredicted RBP4.52□□□□□ -1.69
PMS1-216ENST00000447734 HTRA2O43464 458 aaPredicted RBP4.52□□□□□ -1.69
PMS1-216ENST00000447734 FRS3O43559 492 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 COBLO75128 1261 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 ADAMTS4O75173 837 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 DGKIO75912 1065 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 ALX3O95076 343 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 FTLP02792 175 aaPredicted RBP4.52□□□□□ -1.69
PMS1-216ENST00000447734 IFIT1P09914 478 aaKnown RBP4.52□□□□□ -1.69
PMS1-216ENST00000447734 CAPN3P20807 821 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 FPR2P25090 351 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 PREPP48147 710 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 LGALS4P56470 323 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 PCBP3P57721 371 aaKnown RBP4.52□□□□□ -1.69
PMS1-216ENST00000447734 RAB1AP62820 205 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 CCT2P78371 535 aaKnown RBP4.52□□□□□ -1.69
PMS1-216ENST00000447734 MPP1Q00013 466 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 CDK17Q00537 523 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 TNK2Q07912 1038 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 ZNF543Q08ER8 600 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 PMS2P11Q13670 270 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 PRKG1Q13976 671 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 CCDC96Q2M329 555 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 HABP4Q5JVS0 413 aaKnown RBP4.52□□□□□ -1.69
PMS1-216ENST00000447734 VPS53Q5VIR6 699 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 CDPF1Q6NVV7 123 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 HIBCHQ6NVY1 386 aaPredicted RBP4.52□□□□□ -1.69
PMS1-216ENST00000447734 GGT6Q6P531 493 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 PHYKPLQ8IUZ5 450 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 OXR1Q8N573 874 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 PIWIL2Q8TC59 973 aaKnown RBP4.52□□□□□ -1.69
PMS1-216ENST00000447734 SH3RF2Q8TEC5 729 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 NRG4Q8WWG1 115 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 RPGRQ92834 1020 aaKnown RBP4.52□□□□□ -1.69
PMS1-216ENST00000447734 RGMAQ96B86 450 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 ZC3H10Q96K80 434 aaKnown RBP4.52□□□□□ -1.69
PMS1-216ENST00000447734 ZSCAN31Q96LW9 406 aaPredicted RBP4.52□□□□□ -1.69
PMS1-216ENST00000447734 TTLL2Q9BWV7 592 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 TMEM120AQ9BXJ8 343 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 CD244Q9BZW8 370 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 OSBPL5Q9H0X9 879 aaPredicted RBP4.52□□□□□ -1.69
PMS1-216ENST00000447734 WNT8AQ9H1J5 351 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 KCTD10Q9H3F6 313 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 POFUT1Q9H488 388 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 PCMTD2Q9NV79 361 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 DSEQ9UL01 958 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 TCFL5Q9UL49 500 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 NOL7Q9UMY1 257 aaKnown RBP4.52□□□□□ -1.69
PMS1-216ENST00000447734 COA3Q9Y2R0 106 aaPredicted RBP4.52□□□□□ -1.69
PMS1-216ENST00000447734 CEP83Q9Y592 693 aa4.52□□□□□ -1.69
PMS1-216ENST00000447734 OAS3Q9Y6K5 1087 aaKnown RBP4.52□□□□□ -1.69
PMS1-216ENST00000447734 PRSS38A1L453 326 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 A6NCN8 305 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 EYA2O00167 538 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 FFAR2O15552 330 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 PHGDHO43175 533 aaKnown RBP4.51□□□□□ -1.69
PMS1-216ENST00000447734 IRAK2O43187 625 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 DYNC1LI2O43237 492 aaPredicted RBP4.51□□□□□ -1.69
PMS1-216ENST00000447734 FKTNO75072 461 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 FGF18O76093 207 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 APOL3O95236 402 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 CD4P01730 458 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 TSHRP16473 764 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 ENDOUP21128 410 aaKnown RBP4.51□□□□□ -1.69
PMS1-216ENST00000447734 EDNRBP24530 442 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 KRT9P35527 623 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 TXKP42681 527 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 MAP2K6P52564 334 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 SPIDRQ14159 915 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 MYBPC2Q14324 1141 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 SEC23AQ15436 765 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 C3orf36Q3SXR2 165 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 ZBTB41Q5SVQ8 909 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 LMBR1LQ6UX01 489 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 CYP2R1Q6VVX0 501 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 RFX8Q6ZV50 586 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 TBC1D1Q86TI0 1168 aaPredicted RBP4.51□□□□□ -1.69
PMS1-216ENST00000447734 DZIP1LQ8IYY4 767 aaKnown RBP4.51□□□□□ -1.69
PMS1-216ENST00000447734 FAM26EQ8N5C1 309 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 MSL3Q8N5Y2 521 aaKnown RBP4.51□□□□□ -1.69
PMS1-216ENST00000447734 LINC00116Q8NCU8 138 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 GIMAP7Q8NHV1 300 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 PIP4K2CQ8TBX8 421 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 TSPEARQ8WU66 669 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.51□□□□□ -1.69
PMS1-216ENST00000447734 FBLIM1Q8WUP2 373 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 BRI3BPQ8WY22 251 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 HDAC2Q92769 488 aaKnown RBP4.51□□□□□ -1.69
PMS1-216ENST00000447734 ZBTB10Q96DT7 871 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 MAML3Q96JK9 1138 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 NT5C1BQ96P26 610 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 DUSP23Q9BVJ7 150 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 KRTAP4-2Q9BYR5 136 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms