RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 GJB5O95377 273 aa13.23□□□□□ -0.29
RFC4-208ENST00000447345 EYA4O95677 639 aa13.23□□□□□ -0.29
RFC4-208ENST00000447345 PLCG1P19174 1290 aa13.23□□□□□ -0.29
RFC4-208ENST00000447345 NCLP19338 710 aaKnown RBP13.23□□□□□ -0.29
RFC4-208ENST00000447345 SFPQP23246 707 aaKnown RBP eCLIP13.23□□□□□ -0.29
RFC4-208ENST00000447345 GLRA2P23416 452 aa13.23□□□□□ -0.29
RFC4-208ENST00000447345 ARL2P36404 184 aa13.23□□□□□ -0.29
RFC4-208ENST00000447345 NASPP49321 788 aaPredicted RBP13.23□□□□□ -0.29
RFC4-208ENST00000447345 DNM1Q05193 864 aaKnown RBP13.23□□□□□ -0.29
RFC4-208ENST00000447345 RAD51AP2Q09MP3 1159 aa13.23□□□□□ -0.29
RFC4-208ENST00000447345 CAPSQ13938 189 aa13.23□□□□□ -0.29
RFC4-208ENST00000447345 DHX8Q14562 1220 aaKnown RBP13.23□□□□□ -0.29
RFC4-208ENST00000447345 SLC39A14Q15043 492 aa13.23□□□□□ -0.29
RFC4-208ENST00000447345 TMEM119Q4V9L6 283 aa13.23□□□□□ -0.29
RFC4-208ENST00000447345 ODR4Q5SWX8 454 aa13.23□□□□□ -0.29
RFC4-208ENST00000447345 PPP2R2DQ66LE6 453 aa13.23□□□□□ -0.29
RFC4-208ENST00000447345 USP49Q70CQ1 688 aa13.23□□□□□ -0.29
RFC4-208ENST00000447345 RTN4RL1Q86UN2 441 aaPredicted RBP13.23□□□□□ -0.29
RFC4-208ENST00000447345 DEFB123Q8N688 67 aa13.23□□□□□ -0.29
RFC4-208ENST00000447345 MCPH1Q8NEM0 835 aa13.23□□□□□ -0.29
RFC4-208ENST00000447345 SYMPKQ92797 1274 aaKnown RBP13.23□□□□□ -0.29
RFC4-208ENST00000447345 EPSTI1Q96J88 318 aa13.23□□□□□ -0.29
RFC4-208ENST00000447345 ADAM2Q99965 735 aa13.23□□□□□ -0.29
RFC4-208ENST00000447345 RUSC1Q9BVN2 902 aa13.23□□□□□ -0.29
RFC4-208ENST00000447345 NT5C3AQ9H0P0 336 aa13.23□□□□□ -0.29
RFC4-208ENST00000447345 TTYH1Q9H313 450 aaPredicted RBP13.23□□□□□ -0.29
RFC4-208ENST00000447345 IFT122Q9HBG6 1241 aa13.23□□□□□ -0.29
RFC4-208ENST00000447345 SRPRBQ9Y5M8 271 aaKnown RBP13.23□□□□□ -0.29
RFC4-208ENST00000447345 ATG2AQ2TAZ0 1938 aa13.22□□□□□ -0.29
RFC4-208ENST00000447345 LRRIQ4A6NIV6 560 aa13.22□□□□□ -0.29
RFC4-208ENST00000447345 SPTLC2O15270 562 aa13.22□□□□□ -0.29
RFC4-208ENST00000447345 ARHGEF15O94989 841 aa13.22□□□□□ -0.29
RFC4-208ENST00000447345 BRD1O95696 1058 aa13.22□□□□□ -0.29
RFC4-208ENST00000447345 CYP11B2P19099 503 aa13.22□□□□□ -0.29
RFC4-208ENST00000447345 PHKA2P46019 1235 aa13.22□□□□□ -0.29
RFC4-208ENST00000447345 CDC42EP1Q00587 391 aa13.22□□□□□ -0.29
RFC4-208ENST00000447345 TFDP1Q14186 410 aa13.22□□□□□ -0.29
RFC4-208ENST00000447345 MXD4Q14582 209 aaPredicted RBP13.22□□□□□ -0.29
RFC4-208ENST00000447345 HYIQ5T013 277 aa13.22□□□□□ -0.29
RFC4-208ENST00000447345 CATSPER4Q7RTX7 472 aa13.22□□□□□ -0.29
RFC4-208ENST00000447345 ZNF710Q8N1W2 664 aa13.22□□□□□ -0.29
RFC4-208ENST00000447345 KRI1Q8N9T8 703 aaKnown RBP13.22□□□□□ -0.29
RFC4-208ENST00000447345 LINC00301Q8NCQ3 95 aa13.22□□□□□ -0.29
RFC4-208ENST00000447345 LRRC15Q8TF66 581 aa13.22□□□□□ -0.29
RFC4-208ENST00000447345 BSNDQ8WZ55 320 aa13.22□□□□□ -0.29
RFC4-208ENST00000447345 YME1L1Q96TA2 773 aa13.22□□□□□ -0.29
RFC4-208ENST00000447345 TSPYL2Q9H2G4 693 aaPredicted RBP13.22□□□□□ -0.29
RFC4-208ENST00000447345 MINDY3Q9H8M7 445 aa13.22□□□□□ -0.29
RFC4-208ENST00000447345 CERS4Q9HA82 394 aa13.22□□□□□ -0.29
RFC4-208ENST00000447345 SLC28A3Q9HAS3 691 aa13.22□□□□□ -0.29
RFC4-208ENST00000447345 PIN4Q9Y237 131 aaKnown RBP13.22□□□□□ -0.29
RFC4-208ENST00000447345 TDRD15B5MCY1 1934 aaKnown RBP13.21□□□□□ -0.29
RFC4-208ENST00000447345 CHD7Q9P2D1 2997 aa13.21□□□□□ -0.29
RFC4-208ENST00000447345 INO80B-WBP1J3KQ70 363 aa13.21□□□□□ -0.29
RFC4-208ENST00000447345 ASAP2O43150 1006 aa13.21□□□□□ -0.29
RFC4-208ENST00000447345 YEATS4O95619 227 aa13.21□□□□□ -0.29
RFC4-208ENST00000447345 PLA2G4BP0C869 781 aa13.21□□□□□ -0.29
RFC4-208ENST00000447345 ZSCAN20P17040 1043 aaPredicted RBP13.21□□□□□ -0.29
RFC4-208ENST00000447345 TXLNAP40222 546 aa13.21□□□□□ -0.29
RFC4-208ENST00000447345 GATMP50440 423 aa13.21□□□□□ -0.29
RFC4-208ENST00000447345 CACNB1Q02641 598 aaPredicted RBP13.21□□□□□ -0.29
RFC4-208ENST00000447345 SPRED2Q7Z698 418 aa13.21□□□□□ -0.29
RFC4-208ENST00000447345 RNF169Q8NCN4 708 aa13.21□□□□□ -0.29
RFC4-208ENST00000447345 TOP1MTQ969P6 601 aa13.21□□□□□ -0.29
RFC4-208ENST00000447345 KIFC3Q9BVG8 833 aa13.21□□□□□ -0.29
RFC4-208ENST00000447345 INO80BQ9C086 356 aaPredicted RBP13.21□□□□□ -0.29
RFC4-208ENST00000447345 ZNF576Q9H609 170 aa13.21□□□□□ -0.29
RFC4-208ENST00000447345 MTUS1Q9ULD2 1270 aa13.21□□□□□ -0.29
RFC4-208ENST00000447345 LRFN2Q9ULH4 789 aa13.21□□□□□ -0.29
RFC4-208ENST00000447345 PLXNA4Q9HCM2 1894 aa13.21□□□□□ -0.3
RFC4-208ENST00000447345 NPHP3-ACAD11A0A0J9YXS1 232 aa13.2□□□□□ -0.3
RFC4-208ENST00000447345 HIP1RO75146 1068 aa13.2□□□□□ -0.3
RFC4-208ENST00000447345 ERLIN2O94905 339 aa13.2□□□□□ -0.3
RFC4-208ENST00000447345 LIG1P18858 919 aa13.2□□□□□ -0.3
RFC4-208ENST00000447345 SARSP49591 514 aaKnown RBP13.2□□□□□ -0.3
RFC4-208ENST00000447345 SLC12A3P55017 1021 aa13.2□□□□□ -0.3
RFC4-208ENST00000447345 DSC3Q14574 896 aa13.2□□□□□ -0.3
RFC4-208ENST00000447345 PAN2Q504Q3 1202 aaKnown RBP13.2□□□□□ -0.3
RFC4-208ENST00000447345 TWF2Q6IBS0 349 aaKnown RBP13.2□□□□□ -0.3
RFC4-208ENST00000447345 RINT1Q6NUQ1 792 aa13.2□□□□□ -0.3
RFC4-208ENST00000447345 GPR153Q6NV75 609 aa13.2□□□□□ -0.3
RFC4-208ENST00000447345 SRGAP1Q7Z6B7 1085 aa13.2□□□□□ -0.3
RFC4-208ENST00000447345 RAD9AQ99638 391 aa13.2□□□□□ -0.3
RFC4-208ENST00000447345 CCSER1Q9C0I3 900 aa13.2□□□□□ -0.3
RFC4-208ENST00000447345 RGS18Q9NS28 235 aa13.2□□□□□ -0.3
RFC4-208ENST00000447345 C1orf112Q9NSG2 853 aa13.2□□□□□ -0.3
RFC4-208ENST00000447345 CCDC39Q9UFE4 941 aa13.2□□□□□ -0.3
RFC4-208ENST00000447345 CDH23Q9H251 3354 aa13.2□□□□□ -0.3
RFC4-208ENST00000447345 ADGRA3Q8IWK6 1321 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 SLC26A4O43511 780 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 PPP6R2O75170 966 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 ANP32AP39687 249 aaKnown RBP13.19□□□□□ -0.3
RFC4-208ENST00000447345 ME1P48163 572 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 PTENP60484 403 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 HTRA4P83105 476 aaPredicted RBP13.19□□□□□ -0.3
RFC4-208ENST00000447345 TAP1Q03518 808 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 MBTD1Q05BQ5 628 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 MCM6Q14566 821 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 LONRF3Q496Y0 759 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 TPRNQ4KMQ1 711 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms