RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 THEGQ9P2T0 379 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 NKRFO15226 690 aaKnown RBP eCLIP9.14□□□□□ -0.95
PTPN3-204ENST00000446349 PRKAB2O43741 272 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 SUPT20HL2P0C7V6 817 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 RESP18Q5W5W9 173 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 RHPN2Q8IUC4 686 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 MROH8Q9H579 483 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 MAN1B1Q9UKM7 699 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 PPP1R12AO14974 1030 aaPredicted RBP9.14□□□□□ -0.95
PTPN3-204ENST00000446349 DNAJC8O75937 253 aaPredicted RBP9.14□□□□□ -0.95
PTPN3-204ENST00000446349 PCSK1P29120 753 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 PCK1P35558 622 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 STAT5BP51692 787 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 EPHB4P54760 987 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 MKRN3Q13064 507 aaKnown RBP9.14□□□□□ -0.95
PTPN3-204ENST00000446349 UBE2SQ16763 222 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 KNOP1Q1ED39 458 aaKnown RBP9.14□□□□□ -0.95
PTPN3-204ENST00000446349 SCN4BQ8IWT1 228 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 ADGRF4Q8IZF3 695 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 GIPC2Q8TF65 315 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 RABGGTAQ92696 567 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 GFPT2O94808 682 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 TXNP10599 105 aaKnown RBP9.14□□□□□ -0.95
PTPN3-204ENST00000446349 PNPLA4P41247 253 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 GLB1LQ6UWU2 654 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 GPD1LQ8N335 351 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 SERPINI1Q99574 410 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 EFCC1Q9HA90 598 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 TJP2Q9UDY2 1190 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 SDC4P31431 198 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 HSD17B4P51659 736 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 RASSF7Q02833 373 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 ANO4Q32M45 955 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 HAUS6Q7Z4H7 955 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 PCSK9Q8NBP7 692 aaKnown RBP9.13□□□□□ -0.95
PTPN3-204ENST00000446349 CLIC6Q96NY7 704 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 MED15Q96RN5 788 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 ADAM22Q9P0K1 906 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 GABBR1Q9UBS5 961 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 HBP1O60381 514 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 ACADSBP45954 432 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 RABL6Q3YEC7 729 aaPredicted RBP9.13□□□□□ -0.95
PTPN3-204ENST00000446349 BTBD8Q5XKL5 378 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 ZNF589Q86UQ0 364 aaPredicted RBP9.13□□□□□ -0.95
PTPN3-204ENST00000446349 ERAP1Q9NZ08 941 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 IQSEC2Q5JU85 1478 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 PNPLA6Q8IY17 1366 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 MUTP22033 750 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 RWDD4Q6NW29 188 aaKnown RBP9.13□□□□□ -0.95
PTPN3-204ENST00000446349 SEPT1Q8WYJ6 367 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 CELF1Q92879 486 aaKnown RBP9.13□□□□□ -0.95
PTPN3-204ENST00000446349 LRRC37BQ96QE4 947 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 FGFR1OP2Q9NVK5 253 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 TLR7Q9NYK1 1049 aaKnown RBP9.13□□□□□ -0.95
PTPN3-204ENST00000446349 ANKRD20A4Q4UJ75 823 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 CCDC38Q502W7 563 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 ANKRD20A8PQ5CZ79 823 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 ANKRD20A2Q5SQ80 823 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 FAM182BQ5T319 152 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 ANKRD20A1Q5TYW2 823 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 AFG1LQ8WV93 481 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 GLT1D1Q96MS3 346 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 EPAS1Q99814 870 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 PCIF1Q9H4Z3 704 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 LRRN2O75325 713 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 TADA2AO75478 443 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 KRT37O76014 449 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 EYA4O95677 639 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 PRDX5P30044 214 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 VAMP7P51809 220 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 GABPB1Q06547 395 aaPredicted RBP9.13□□□□□ -0.95
PTPN3-204ENST00000446349 TSTA3Q13630 321 aaPredicted RBP9.13□□□□□ -0.95
PTPN3-204ENST00000446349 TMTC4Q5T4D3 741 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 FRMD5Q7Z6J6 570 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 ZNF34Q8IZ26 560 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 DCP1BQ8IZD4 617 aaKnown RBP9.13□□□□□ -0.95
PTPN3-204ENST00000446349 CDC23Q9UJX2 597 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 INPP5FQ9Y2H2 1132 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 PRAMEF22A3QJZ6 481 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 CLIC2O15247 247 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 NR3C1P04150 777 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 CPB1P15086 417 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 GPC5P78333 572 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 PHEXP78562 749 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 RBP5P82980 135 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 WASHC5Q12768 1159 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 LONRF3Q496Y0 759 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 LDHDQ86WU2 507 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 DEPDC1BQ8WUY9 529 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 FAM84BQ96KN1 310 aaPredicted RBP9.13□□□□□ -0.95
PTPN3-204ENST00000446349 POLR3FQ9H1D9 316 aaPredicted RBP9.13□□□□□ -0.95
PTPN3-204ENST00000446349 MYOZ2Q9NPC6 264 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 LRRC7Q96NW7 1537 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 KIDINS220Q9ULH0 1771 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 SKIV2LQ15477 1246 aaKnown RBP9.13□□□□□ -0.95
PTPN3-204ENST00000446349 SV2CQ496J9 727 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 C12orf60Q5U649 245 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 SPATA2LQ8IUW3 424 aaPredicted RBP9.13□□□□□ -0.95
PTPN3-204ENST00000446349 GPATCH11Q8N954 259 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 APPL2Q8NEU8 664 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms