RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	DR1	Q01658	176 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	ZNF543	Q08ER8	600 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	TRAF1	Q13077	416 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	GIT2	Q14161	759 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	KNOP1	Q1ED39	458 aa	Known RBP	13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	CCDC105	Q8IYK2	499 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	LRRC45	Q96CN5	670 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	DDX23	Q9BUQ8	820 aa	Known RBP	13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	SERPINB13	Q9UIV8	391 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	PCDHGC5	Q9Y5F6	944 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	EEF2	P13639	858 aa	Known RBP	13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	DLG4	P78352	724 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	ARHGAP4	P98171	946 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	TMEM119	Q4V9L6	283 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	DCAF12L1	Q5VU92	463 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	CYB5D1	Q6P9G0	228 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	TRIM74	Q86UV6	250 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	TRIM73	Q86UV7	250 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	FAM186B	Q8IYM0	893 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	PICK1	Q9NRD5	415 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	DAAM1	Q9Y4D1	1078 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	SCTR	P47872	440 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	GKAP1	Q5VSY0	366 aa	Predicted RBP	13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	FAM47E	Q6ZV65	393 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	TMC3	Q7Z5M5	1100 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	VPS36	Q86VN1	386 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	HEMGN	Q9BXL5	484 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	MAGEF1	Q9HAY2	307 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	FOXN3	O00409	490 aa	Predicted RBP	13.55	□□□□□ -0.24
DDR1-238	ENST00000446312	RGS16	O15492	202 aa	Predicted RBP	13.55	□□□□□ -0.24
DDR1-238	ENST00000446312	EXOC3	O60645	756 aa		13.55	□□□□□ -0.24
DDR1-238	ENST00000446312	TTLL1	O95922	423 aa		13.55	□□□□□ -0.24
DDR1-238	ENST00000446312	HSPA9	P38646	679 aa	Known RBP	13.55	□□□□□ -0.24
DDR1-238	ENST00000446312	MYO1E	Q12965	1108 aa		13.55	□□□□□ -0.24
DDR1-238	ENST00000446312	SLFN13	Q68D06	897 aa		13.55	□□□□□ -0.24
DDR1-238	ENST00000446312	LZTS2	Q9BRK4	669 aa		13.55	□□□□□ -0.24
DDR1-238	ENST00000446312	RIOX1	Q9H6W3	641 aa		13.55	□□□□□ -0.24
DDR1-238	ENST00000446312	ABCF3	Q9NUQ8	709 aa		13.55	□□□□□ -0.24
DDR1-238	ENST00000446312		F8VZ95	297 aa		13.55	□□□□□ -0.24
DDR1-238	ENST00000446312	LCA5L	O95447	670 aa		13.55	□□□□□ -0.24
DDR1-238	ENST00000446312	SLC17A8	Q8NDX2	589 aa		13.55	□□□□□ -0.24
DDR1-238	ENST00000446312	CCDC97	Q96F63	343 aa	Predicted RBP	13.55	□□□□□ -0.24
DDR1-238	ENST00000446312	DYDC2	Q96IM9	177 aa		13.55	□□□□□ -0.24
DDR1-238	ENST00000446312	NYX	Q9GZU5	481 aa		13.55	□□□□□ -0.24
DDR1-238	ENST00000446312	HOMER2	Q9NSB8	354 aa		13.55	□□□□□ -0.24
DDR1-238	ENST00000446312	NARF	Q9UHQ1	456 aa		13.55	□□□□□ -0.24
DDR1-238	ENST00000446312	TSKS	Q9UJT2	592 aa		13.55	□□□□□ -0.24
DDR1-238	ENST00000446312	COG5	Q9UP83	839 aa		13.55	□□□□□ -0.24
DDR1-238	ENST00000446312	ZBTB5	O15062	677 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	SNUPN	O95149	360 aa	Known RBP	13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	NT5DC3	Q86UY8	548 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	PARP9	Q8IXQ6	854 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	MICAL1	Q8TDZ2	1067 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	TATDN2	Q93075	761 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	STAMBPL1	Q96FJ0	436 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	VCPKMT	Q9H867	229 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	KLHL11	Q9NVR0	708 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	SNED1	Q8TER0	1413 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	ECEL1	O95672	775 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	DLAT	P10515	647 aa	Known RBP	13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	GRAP	Q13588	217 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	SNCB	Q16143	134 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	GLE1	Q53GS7	698 aa	Known RBP	13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	DENND2C	Q68D51	928 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	CLEC4G	Q6UXB4	293 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	ZNF662	Q6ZS27	426 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	GRAPL	Q8TC17	118 aa	Predicted RBP	13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	SLC35C1	Q96A29	364 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	RNF25	Q96BH1	459 aa	Predicted RBP	13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	SAAL1	Q96ER3	474 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	FAM167B	Q9BTA0	163 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	DOT1L	Q8TEK3	1739 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312		H0YGN5	161 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	SPOP	O43791	374 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	RNASEL	Q05823	741 aa	Known RBP	13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	CERS5	Q8N5B7	392 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	LRRC57	Q8N9N7	239 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	KLHL23	Q8NBE8	558 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	INTS9	Q9NV88	658 aa	Known RBP	13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	FGFR1OP2	Q9NVK5	253 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	NFS1	Q9Y697	457 aa		13.54	□□□□□ -0.24
DDR1-238	ENST00000446312	COL16A1	Q07092	1604 aa	Predicted RBP	13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	TRAPPC3	O43617	180 aa		13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	FTL	P02792	175 aa	Predicted RBP	13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	ANKRD20A8P	Q5CZ79	823 aa		13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	ODR4	Q5SWX8	454 aa		13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	TRAPPC3L	Q5T215	181 aa		13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	RUFY4	Q6ZNE9	571 aa		13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	FAM228A	Q86W67	206 aa		13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	FUK	Q8N0W3	1084 aa		13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	ARFGAP2	Q8N6H7	521 aa		13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	SCFD2	Q8WU76	684 aa		13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	KIFC3	Q9BVG8	833 aa		13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	TRIM7	Q9C029	511 aa		13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	RABGAP1	Q9Y3P9	1069 aa		13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	PCDHA2	Q9Y5H9	948 aa		13.53	□□□□□ -0.24

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