RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 ISCUQ9H1K1 167 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 KIAA1586Q9HCI6 787 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 APEX2Q9UBZ4 518 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 BYSLQ13895 437 aaKnown RBP17.87■□□□□ 0.45
TCOF1-206ENST00000445265 KRT39Q6A163 491 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 CASC4Q6P4E1 433 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 CCDC137Q6PK04 289 aaKnown RBP17.87■□□□□ 0.45
TCOF1-206ENST00000445265 ARHGAP20Q9P2F6 1191 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 INTUQ9ULD6 942 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.87■□□□□ 0.45
TCOF1-206ENST00000445265 MAP7D3Q8IWC1 876 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 NUP85Q9BW27 656 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 TXLNGQ9NUQ3 528 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 BAZ2BQ9UIF8 2168 aaKnown RBP17.87■□□□□ 0.45
TCOF1-206ENST00000445265 ADCY1Q08828 1119 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 QTRT2Q9H974 415 aaKnown RBP17.87■□□□□ 0.45
TCOF1-206ENST00000445265 KCND2Q9NZV8 630 aa17.87■□□□□ 0.45
TCOF1-206ENST00000445265 HERC5Q9UII4 1024 aaKnown RBP17.87■□□□□ 0.45
TCOF1-206ENST00000445265 SORBS3O60504 671 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 KRT76Q01546 638 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 DRP2Q13474 957 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 SLFN12LQ6IEE8 588 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 RILPQ96NA2 401 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 CCT8L2Q96SF2 557 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 PPP1R12CQ9BZL4 782 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 TTI1O43156 1089 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 ZNF746Q6NUN9 644 aaPredicted RBP17.86■□□□□ 0.45
TCOF1-206ENST00000445265 SLC35G2Q8TBE7 412 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 SERPINA10Q9UK55 444 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 A0A087X0T9 212 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 RAD17O75943 681 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 FAM228BP0C875 321 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 MYBP10242 640 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 MIGA2Q7L4E1 593 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 FMN2Q9NZ56 1722 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 TNS2Q63HR2 1409 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 SLC16A4O15374 487 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 ECE2O60344 883 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 NDUFB10O96000 172 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 INHBAP08476 426 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 CYP11B2P19099 503 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 LSP1P33241 339 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 MEA1Q16626 185 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 KIAA1755Q5JYT7 1200 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 ADAM22Q9P0K1 906 aa17.86■□□□□ 0.45
TCOF1-206ENST00000445265 SUCLA2Q9P2R7 463 aaPredicted RBP17.86■□□□□ 0.45
TCOF1-206ENST00000445265 EIF3DO15371 548 aaKnown RBP eCLIP17.85■□□□□ 0.458e-7■□□□□ 8.1
TCOF1-206ENST00000445265 SPATA20Q8TB22 786 aa17.85■□□□□ 0.45
TCOF1-206ENST00000445265 DUSP9Q99956 384 aaKnown RBP17.85■□□□□ 0.45
TCOF1-206ENST00000445265 MYO3BQ8WXR4 1341 aa17.85■□□□□ 0.45
TCOF1-206ENST00000445265 LUC7L3O95232 432 aaKnown RBP17.85■□□□□ 0.45
TCOF1-206ENST00000445265 TMEM253P0C7T8 217 aa17.85■□□□□ 0.45
TCOF1-206ENST00000445265 YWHAGP61981 247 aaKnown RBP eCLIP17.85■□□□□ 0.45
TCOF1-206ENST00000445265 MTERF2Q49AM1 385 aa17.85■□□□□ 0.45
TCOF1-206ENST00000445265 AGBL2Q5U5Z8 902 aa17.85■□□□□ 0.45
TCOF1-206ENST00000445265 KRT27Q7Z3Y8 459 aa17.85■□□□□ 0.45
TCOF1-206ENST00000445265 ZNF473Q8WTR7 871 aaKnown RBP17.85■□□□□ 0.45
TCOF1-206ENST00000445265 ZNF341Q9BYN7 854 aa17.85■□□□□ 0.45
TCOF1-206ENST00000445265 IL17RBQ9NRM6 502 aa17.85■□□□□ 0.45
TCOF1-206ENST00000445265 DMGDHQ9UI17 866 aaKnown RBP17.85■□□□□ 0.45
TCOF1-206ENST00000445265 KIF1AQ12756 1690 aa17.85■□□□□ 0.45
TCOF1-206ENST00000445265 LRRD1A4D1F6 860 aa17.85■□□□□ 0.45
TCOF1-206ENST00000445265 SFNP31947 248 aa17.85■□□□□ 0.45
TCOF1-206ENST00000445265 CORO7P57737 925 aa17.85■□□□□ 0.45
TCOF1-206ENST00000445265 SLC27A3Q5K4L6 730 aa17.85■□□□□ 0.45
TCOF1-206ENST00000445265 SCYL2Q6P3W7 929 aa17.85■□□□□ 0.45
TCOF1-206ENST00000445265 ENOSF1Q7L5Y1 443 aa17.85■□□□□ 0.45
TCOF1-206ENST00000445265 GDAP1Q8TB36 358 aa17.85■□□□□ 0.45
TCOF1-206ENST00000445265 HVCN1Q96D96 273 aa17.85■□□□□ 0.45
TCOF1-206ENST00000445265 RIOX1Q9H6W3 641 aa17.85■□□□□ 0.45
TCOF1-206ENST00000445265 RTN2O75298 545 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 LDHAP00338 332 aaKnown RBP17.84■□□□□ 0.45
TCOF1-206ENST00000445265 MUM1Q2TAK8 710 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 PHLDB3Q6NSJ2 640 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 CDC42EP5Q6NZY7 148 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 SPATA31A5Q5VU36 1347 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 SPATA31A7Q8IWB4 1347 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 K7ERI5 159 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 MAP2K7O14733 419 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 NR1H3Q13133 447 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 CENPUQ71F23 418 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 HAUS6Q7Z4H7 955 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 PHLDB2Q86SQ0 1253 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 SYT2Q8N9I0 419 aaPredicted RBP17.84■□□□□ 0.45
TCOF1-206ENST00000445265 RBM41Q96IZ5 413 aaKnown RBP17.84■□□□□ 0.45
TCOF1-206ENST00000445265 DNAJC17Q9NVM6 304 aaKnown RBP17.84■□□□□ 0.45
TCOF1-206ENST00000445265 NAGPAQ9UK23 515 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 H7C0C1 242 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 MSH2P43246 934 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 ATP5OP48047 213 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 METTL13Q8N6R0 699 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.84■□□□□ 0.459e-9■■□□□ 13.4
TCOF1-206ENST00000445265 UBE4BO95155 1302 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 CA4P22748 312 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 MOXD1Q6UVY6 613 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 LRRC31Q6UY01 552 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 TXNRD3Q86VQ6 643 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 EHD2Q9NZN4 543 aa17.84■□□□□ 0.45
TCOF1-206ENST00000445265 TJP3O95049 919 aa17.83■□□□□ 0.45
TCOF1-206ENST00000445265 TBC1D1Q86TI0 1168 aaPredicted RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms