RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 SLC16A4O15374 487 aa17.12■□□□□ 0.33
SNX13-204ENST00000444712 P4HA2O15460 535 aa17.12■□□□□ 0.33
SNX13-204ENST00000444712 PLEKP08567 350 aaPredicted RBP17.12■□□□□ 0.33
SNX13-204ENST00000444712 RBM10P98175 930 aaKnown RBP17.12■□□□□ 0.33
SNX13-204ENST00000444712 ASTE1Q2TB18 679 aaPredicted RBP17.12■□□□□ 0.33
SNX13-204ENST00000444712 SEPT14Q6ZU15 432 aa17.12■□□□□ 0.33
SNX13-204ENST00000444712 CYFIP1Q7L576 1253 aa17.12■□□□□ 0.33
SNX13-204ENST00000444712 MAP4K3Q8IVH8 894 aa17.12■□□□□ 0.33
SNX13-204ENST00000444712 ZNF710Q8N1W2 664 aa17.12■□□□□ 0.33
SNX13-204ENST00000444712 SHCBP1Q8NEM2 672 aa17.12■□□□□ 0.33
SNX13-204ENST00000444712 UBXN4Q92575 508 aa17.12■□□□□ 0.33
SNX13-204ENST00000444712 MAFBQ9Y5Q3 323 aaPredicted RBP17.12■□□□□ 0.33
SNX13-204ENST00000444712 SOWAHBA6NEL2 793 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 CCDC169A6NNP5 214 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 SLC9A1P19634 815 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 NPTX2P47972 431 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 KLHL30Q0D2K2 578 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 HSP90AA2PQ14568 343 aaPredicted RBP17.11■□□□□ 0.33
SNX13-204ENST00000444712 KCTD2Q14681 263 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 FAM160B1Q5W0V3 765 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 MOB2Q70IA6 237 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 SECISBP2LQ93073 1101 aaKnown RBP17.11■□□□□ 0.33
SNX13-204ENST00000444712 VTI1AQ96AJ9 217 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 CARD6Q9BX69 1037 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 GPRC5CQ9NQ84 441 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 TBX20Q9UMR3 447 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 PPME1Q9Y570 386 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 SYNGAP1Q96PV0 1343 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 ANO9A1A5B4 782 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 PJA2O43164 708 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 OATP04181 439 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 MAGEA1P43355 309 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 SP4Q02446 784 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 MOGSQ13724 837 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 C10orf76Q5T2E6 689 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 TMEM161BQ8NDZ6 487 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 TRIM58Q8NG06 486 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 SLC10A4Q96EP9 437 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 PDLIM7Q9NR12 457 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 HSPBP1Q9NZL4 362 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 SIP14410 1827 aa17.11■□□□□ 0.33
SNX13-204ENST00000444712 IGKV6D-21A0A0A0MT36 114 aa17.1■□□□□ 0.33
SNX13-204ENST00000444712 UBA1P22314 1058 aaKnown RBP17.1■□□□□ 0.33
SNX13-204ENST00000444712 MYL7Q01449 175 aa17.1■□□□□ 0.33
SNX13-204ENST00000444712 SP2Q02086 613 aa17.1■□□□□ 0.33
SNX13-204ENST00000444712 CYP27A1Q02318 531 aa17.1■□□□□ 0.33
SNX13-204ENST00000444712 WHAMMP3Q1A5X7 153 aa17.1■□□□□ 0.33
SNX13-204ENST00000444712 DPY19L2P1Q6NXN4 242 aa17.1■□□□□ 0.33
SNX13-204ENST00000444712 USP37Q86T82 979 aa17.1■□□□□ 0.33
SNX13-204ENST00000444712 KCNN1Q92952 543 aa17.1■□□□□ 0.33
SNX13-204ENST00000444712 MMP19Q99542 508 aa17.1■□□□□ 0.33
SNX13-204ENST00000444712 SH2D3AQ9BRG2 576 aa17.1■□□□□ 0.33
SNX13-204ENST00000444712 RBPJLQ9UBG7 517 aa17.1■□□□□ 0.33
SNX13-204ENST00000444712 ATP8B3O60423 1300 aa17.1■□□□□ 0.33
SNX13-204ENST00000444712 ZNF263O14978 683 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 RRP9O43818 475 aaKnown RBP17.09■□□□□ 0.33
SNX13-204ENST00000444712 TLR2O60603 784 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 TACC1O75410 805 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 TADA3O75528 432 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 CCDC172P0C7W6 258 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 PRKCIP41743 596 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 SLC18A3Q16572 532 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 GPAT2Q6NUI2 795 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 TRMT1LQ7Z2T5 733 aaKnown RBP17.09■□□□□ 0.33
SNX13-204ENST00000444712 VPS36Q86VN1 386 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 PDCL2Q8N4E4 241 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 ALS2CR12Q96Q35 445 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 IKZF4Q9H2S9 585 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 SIX2Q9NPC8 291 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 SLC45A1Q9Y2W3 748 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 FHOD1Q9Y613 1164 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 DENND3A2RUS2 1198 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 FARP2O94887 1054 aaPredicted RBP17.09■□□□□ 0.33
SNX13-204ENST00000444712 ABL1P00519 1130 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 ACTN1P12814 892 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 FERP16591 822 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 RFC5P40937 340 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 VAMP7P51809 220 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 POLGP54098 1239 aaPredicted RBP17.09■□□□□ 0.33
SNX13-204ENST00000444712 ENPEPQ07075 957 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 METTL7BQ6UX53 244 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 AFAP1L1Q8TED9 768 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 FAM167AQ96KS9 214 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 NIFKQ9BYG3 293 aaKnown RBP17.09■□□□□ 0.33
SNX13-204ENST00000444712 LACRTQ9GZZ8 138 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 NRBP2Q9NSY0 501 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 TRIM10Q9UDY6 481 aa17.09■□□□□ 0.33
SNX13-204ENST00000444712 PMM2O15305 246 aa17.08■□□□□ 0.33
SNX13-204ENST00000444712 STAT1P42224 750 aa17.08■□□□□ 0.33
SNX13-204ENST00000444712 JAM2P57087 298 aa17.08■□□□□ 0.33
SNX13-204ENST00000444712 MCCD1P59942 119 aaPredicted RBP17.08■□□□□ 0.33
SNX13-204ENST00000444712 FKBP1BP68106 108 aa17.08■□□□□ 0.33
SNX13-204ENST00000444712 CCNA1P78396 465 aa17.08■□□□□ 0.33
SNX13-204ENST00000444712 EMC2Q15006 297 aa17.08■□□□□ 0.33
SNX13-204ENST00000444712 ELF2Q15723 593 aa17.08■□□□□ 0.33
SNX13-204ENST00000444712 MTERF2Q49AM1 385 aa17.08■□□□□ 0.33
SNX13-204ENST00000444712 SRGAP1Q7Z6B7 1085 aa17.08■□□□□ 0.33
SNX13-204ENST00000444712 RNF10Q8N5U6 811 aaKnown RBP17.08■□□□□ 0.33
SNX13-204ENST00000444712 GOLGA1Q92805 767 aa17.08■□□□□ 0.33
SNX13-204ENST00000444712 CLEC11AQ9Y240 323 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms