RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 PIDD1Q9HB75 910 aa16.44■□□□□ 0.22
SYNCRIP-203ENST00000444272 CDHR5Q9HBB8 845 aa16.44■□□□□ 0.22
SYNCRIP-203ENST00000444272 SPATA31C2B4DYI2 1134 aa16.43■□□□□ 0.22
SYNCRIP-203ENST00000444272 GPR182O15218 404 aa16.43■□□□□ 0.22
SYNCRIP-203ENST00000444272 SSBP05455 408 aaKnown RBP eCLIP16.43■□□□□ 0.22
SYNCRIP-203ENST00000444272 PLA2G2AP14555 144 aa16.43■□□□□ 0.22
SYNCRIP-203ENST00000444272 TROAPQ12815 778 aa16.43■□□□□ 0.22
SYNCRIP-203ENST00000444272 QRICH1Q2TAL8 776 aa16.43■□□□□ 0.22
SYNCRIP-203ENST00000444272 ODR4Q5SWX8 454 aa16.43■□□□□ 0.22
SYNCRIP-203ENST00000444272 ZNF852Q6ZMS4 543 aa16.43■□□□□ 0.22
SYNCRIP-203ENST00000444272 FAM43BQ6ZT52 329 aaPredicted RBP16.43■□□□□ 0.22
SYNCRIP-203ENST00000444272 RNF169Q8NCN4 708 aa16.43■□□□□ 0.22
SYNCRIP-203ENST00000444272 BCL7CQ8WUZ0 217 aaPredicted RBP16.43■□□□□ 0.22
SYNCRIP-203ENST00000444272 TRAPPC12Q8WVT3 735 aa16.43■□□□□ 0.22
SYNCRIP-203ENST00000444272 PHKBQ93100 1093 aa16.43■□□□□ 0.22
SYNCRIP-203ENST00000444272 ZNF707Q96C28 371 aaPredicted RBP16.43■□□□□ 0.22
SYNCRIP-203ENST00000444272 KLK13Q9UKR3 277 aa16.43■□□□□ 0.22
SYNCRIP-203ENST00000444272 MSRB2Q9Y3D2 182 aa16.43■□□□□ 0.22
SYNCRIP-203ENST00000444272 PCDHA2Q9Y5H9 948 aa16.43■□□□□ 0.22
SYNCRIP-203ENST00000444272 RRN3P2A6NIE6 340 aa16.42■□□□□ 0.22
SYNCRIP-203ENST00000444272 ZC3H11AO75152 810 aaKnown RBP eCLIP16.42■□□□□ 0.221e-10■□□□□ 9.2
SYNCRIP-203ENST00000444272 SATB1Q01826 763 aa16.42■□□□□ 0.22
SYNCRIP-203ENST00000444272 MAMSTRQ6ZN01 415 aa16.42■□□□□ 0.22
SYNCRIP-203ENST00000444272 ADGRF4Q8IZF3 695 aa16.42■□□□□ 0.22
SYNCRIP-203ENST00000444272 FAM9BQ8IZU0 186 aa16.42■□□□□ 0.22
SYNCRIP-203ENST00000444272 HELQQ8TDG4 1101 aa16.42■□□□□ 0.22
SYNCRIP-203ENST00000444272 IGSF21Q96ID5 467 aa16.42■□□□□ 0.22
SYNCRIP-203ENST00000444272 NDRG2Q9UN36 371 aaKnown RBP16.42■□□□□ 0.22
SYNCRIP-203ENST00000444272 MRPS17Q9Y2R5 130 aaKnown RBP16.42■□□□□ 0.22
SYNCRIP-203ENST00000444272 FIBPO43427 364 aa16.41■□□□□ 0.22
SYNCRIP-203ENST00000444272 MRPS9P82933 396 aaKnown RBP16.41■□□□□ 0.22
SYNCRIP-203ENST00000444272 GHRHRQ02643 423 aa16.41■□□□□ 0.22
SYNCRIP-203ENST00000444272 HSP90AB4PQ58FF6 505 aa16.41■□□□□ 0.22
SYNCRIP-203ENST00000444272 GPATCH4Q5T3I0 446 aaKnown RBP16.41■□□□□ 0.22
SYNCRIP-203ENST00000444272 HEATR6Q6AI08 1181 aaKnown RBP16.41■□□□□ 0.22
SYNCRIP-203ENST00000444272 NME8Q8N427 588 aa16.41■□□□□ 0.22
SYNCRIP-203ENST00000444272 FRAT1Q92837 279 aaPredicted RBP16.41■□□□□ 0.22
SYNCRIP-203ENST00000444272 LRIG1Q96JA1 1093 aa16.41■□□□□ 0.22
SYNCRIP-203ENST00000444272 INPP4AQ96PE3 977 aaPredicted RBP16.41■□□□□ 0.22
SYNCRIP-203ENST00000444272 VN1R3Q9BXE9 311 aa16.41■□□□□ 0.22
SYNCRIP-203ENST00000444272 RTEL1Q9NZ71 1219 aa16.41■□□□□ 0.22
SYNCRIP-203ENST00000444272 SMIM35A0A1B0GVV1 85 aa16.4■□□□□ 0.22
SYNCRIP-203ENST00000444272 C4orf47A7E2U8 309 aa16.4■□□□□ 0.22
SYNCRIP-203ENST00000444272 IPO8O15397 1037 aaKnown RBP16.4■□□□□ 0.22
SYNCRIP-203ENST00000444272 DSC3Q14574 896 aa16.4■□□□□ 0.22
SYNCRIP-203ENST00000444272 CEP85Q6P2H3 762 aa16.4■□□□□ 0.22
SYNCRIP-203ENST00000444272 ELMSAN1Q6PJG2 1045 aa16.4■□□□□ 0.22
SYNCRIP-203ENST00000444272 FAM228AQ86W67 206 aa16.4■□□□□ 0.22
SYNCRIP-203ENST00000444272 LONP2Q86WA8 852 aa16.4■□□□□ 0.22
SYNCRIP-203ENST00000444272 KIF1BPQ96EK5 621 aa16.4■□□□□ 0.22
SYNCRIP-203ENST00000444272 MRPL9Q9BYD2 267 aaKnown RBP16.4■□□□□ 0.22
SYNCRIP-203ENST00000444272 HEBP1Q9NRV9 189 aa16.4■□□□□ 0.22
SYNCRIP-203ENST00000444272 TOMM22Q9NS69 142 aa16.4■□□□□ 0.22
SYNCRIP-203ENST00000444272 ZFP37Q9Y6Q3 630 aaPredicted RBP16.4■□□□□ 0.22
SYNCRIP-203ENST00000444272 SHISA7A6NL88 538 aa16.39■□□□□ 0.21
SYNCRIP-203ENST00000444272 DHX16O60231 1041 aaKnown RBP16.39■□□□□ 0.21
SYNCRIP-203ENST00000444272 EPN2O95208 641 aa16.39■□□□□ 0.21
SYNCRIP-203ENST00000444272 CEACAM1P13688 526 aa16.39■□□□□ 0.21
SYNCRIP-203ENST00000444272 CXCL12P48061 93 aa16.39■□□□□ 0.21
SYNCRIP-203ENST00000444272 PLCB4Q15147 1175 aa16.39■□□□□ 0.21
SYNCRIP-203ENST00000444272 TCEAL6Q6IPX3 200 aa16.39■□□□□ 0.21
SYNCRIP-203ENST00000444272 FCHSD1Q86WN1 690 aa16.39■□□□□ 0.21
SYNCRIP-203ENST00000444272 ECHDC2Q86YB7 292 aa16.39■□□□□ 0.21
SYNCRIP-203ENST00000444272 HNRNPLLQ8WVV9 542 aaKnown RBP16.39■□□□□ 0.21
SYNCRIP-203ENST00000444272 TCEAL3Q969E4 200 aa16.39■□□□□ 0.21
SYNCRIP-203ENST00000444272 PPP1R16BQ96T49 567 aa16.39■□□□□ 0.21
SYNCRIP-203ENST00000444272 IER2Q9BTL4 223 aa16.39■□□□□ 0.21
SYNCRIP-203ENST00000444272 MKNK1Q9BUB5 465 aa16.39■□□□□ 0.21
SYNCRIP-203ENST00000444272 EDEM2Q9BV94 578 aa16.39■□□□□ 0.21
SYNCRIP-203ENST00000444272 SMARCAD1Q9H4L7 1026 aa16.39■□□□□ 0.21
SYNCRIP-203ENST00000444272 SPAG17Q6Q759 2223 aa16.38■□□□□ 0.21
SYNCRIP-203ENST00000444272 CFAP46Q8IYW2 2715 aa16.38■□□□□ 0.21
SYNCRIP-203ENST00000444272 GSTTP1A0A1W2PQM5 241 aa16.38■□□□□ 0.21
SYNCRIP-203ENST00000444272 RNF113AO15541 343 aaKnown RBP16.38■□□□□ 0.21
SYNCRIP-203ENST00000444272 C1QL1O75973 258 aa16.38■□□□□ 0.21
SYNCRIP-203ENST00000444272 CAPNS1P04632 268 aa16.38■□□□□ 0.21
SYNCRIP-203ENST00000444272 PLA2G2CQ5R387 149 aa16.38■□□□□ 0.21
SYNCRIP-203ENST00000444272 DAB2IPQ5VWQ8 1189 aa16.38■□□□□ 0.21
SYNCRIP-203ENST00000444272 MTSS1LQ765P7 747 aa16.38■□□□□ 0.21
SYNCRIP-203ENST00000444272 SEPT1Q8WYJ6 367 aa16.38■□□□□ 0.21
SYNCRIP-203ENST00000444272 KXD1Q9BQD3 176 aa16.38■□□□□ 0.21
SYNCRIP-203ENST00000444272 VAT1LQ9HCJ6 419 aa16.38■□□□□ 0.21
SYNCRIP-203ENST00000444272 MAP3K20Q9NYL2 800 aaKnown RBP16.38■□□□□ 0.21
SYNCRIP-203ENST00000444272 DPP7Q9UHL4 492 aa16.38■□□□□ 0.21
SYNCRIP-203ENST00000444272 ZNF462Q96JM2 2506 aa16.38■□□□□ 0.21
SYNCRIP-203ENST00000444272 DOCK6Q96HP0 2047 aa16.37■□□□□ 0.21
SYNCRIP-203ENST00000444272 LILRB3O75022 631 aa16.37■□□□□ 0.21
SYNCRIP-203ENST00000444272 GLUD1P00367 558 aa16.37■□□□□ 0.21
SYNCRIP-203ENST00000444272 FSHRP23945 695 aa16.37■□□□□ 0.21
SYNCRIP-203ENST00000444272 RRP12Q5JTH9 1297 aaKnown RBP16.37■□□□□ 0.21
SYNCRIP-203ENST00000444272 ZNF687Q8N1G0 1237 aa16.37■□□□□ 0.21
SYNCRIP-203ENST00000444272 LOXL4Q96JB6 756 aa16.37■□□□□ 0.21
SYNCRIP-203ENST00000444272 OSMRQ99650 979 aa16.37■□□□□ 0.21
SYNCRIP-203ENST00000444272 SENP7Q9BQF6 1050 aa16.37■□□□□ 0.21
SYNCRIP-203ENST00000444272 PHF20Q9BVI0 1012 aa16.37■□□□□ 0.21
SYNCRIP-203ENST00000444272 NT5C3AQ9H0P0 336 aa16.37■□□□□ 0.21
SYNCRIP-203ENST00000444272 MRPL17Q9NRX2 175 aaKnown RBP16.37■□□□□ 0.21
SYNCRIP-203ENST00000444272 RAI2Q9Y5P3 530 aa16.37■□□□□ 0.21
SYNCRIP-203ENST00000444272 C2CD2LO14523 706 aa16.36■□□□□ 0.21
SYNCRIP-203ENST00000444272 ORC4O43929 436 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms