RNA–Protein interactions for RNA: ENST00000443289.5

ATG4C-205, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 2

Gene ATG4C, Length 603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-205ENST00000443289 ZNF579Q8NAF0 562 aaKnown RBP18.21■□□□□ 0.51
ATG4C-205ENST00000443289 KLHL23Q8NBE8 558 aa18.21■□□□□ 0.51
ATG4C-205ENST00000443289 SPPL3Q8TCT6 385 aa18.21■□□□□ 0.51
ATG4C-205ENST00000443289 NEK9Q8TD19 979 aa18.21■□□□□ 0.51
ATG4C-205ENST00000443289 MTMR9Q96QG7 549 aa18.21■□□□□ 0.51
ATG4C-205ENST00000443289 HSD17B14Q9BPX1 270 aa18.21■□□□□ 0.51
ATG4C-205ENST00000443289 EIF2AK1Q9BQI3 630 aaKnown RBP18.21■□□□□ 0.51
ATG4C-205ENST00000443289 TMEM117Q9H0C3 514 aa18.21■□□□□ 0.51
ATG4C-205ENST00000443289 FOXP1Q9H334 677 aaPredicted RBP18.21■□□□□ 0.51
ATG4C-205ENST00000443289 CSDE1O75534 798 aaKnown RBP18.2■□□□□ 0.5
ATG4C-205ENST00000443289 LYPLA2O95372 231 aa18.2■□□□□ 0.5
ATG4C-205ENST00000443289 ITGB1P05556 798 aa18.2■□□□□ 0.5
ATG4C-205ENST00000443289 HSP90AA1P07900 732 aaKnown RBP18.2■□□□□ 0.5
ATG4C-205ENST00000443289 FGFR1P11362 822 aa18.2■□□□□ 0.5
ATG4C-205ENST00000443289 KCNA5P22460 613 aa18.2■□□□□ 0.5
ATG4C-205ENST00000443289 TXKP42681 527 aa18.2■□□□□ 0.5
ATG4C-205ENST00000443289 CYP4A11Q02928 519 aa18.2■□□□□ 0.5
ATG4C-205ENST00000443289 CSPP1Q1MSJ5 1256 aa18.2■□□□□ 0.5
ATG4C-205ENST00000443289 XKR9Q5GH70 373 aa18.2■□□□□ 0.5
ATG4C-205ENST00000443289 LARP1BQ659C4 914 aaKnown RBP18.2■□□□□ 0.5
ATG4C-205ENST00000443289 MCTP1Q6DN14 999 aa18.2■□□□□ 0.5
ATG4C-205ENST00000443289 TCP11Q8WWU5 503 aa18.2■□□□□ 0.5
ATG4C-205ENST00000443289 PSPC1Q8WXF1 523 aaKnown RBP18.2■□□□□ 0.5
ATG4C-205ENST00000443289 PABPC5Q96DU9 382 aaKnown RBP18.2■□□□□ 0.5
ATG4C-205ENST00000443289 NLRP4Q96MN2 994 aa18.2■□□□□ 0.5
ATG4C-205ENST00000443289 TYW1Q9NV66 732 aaKnown RBP18.2■□□□□ 0.5
ATG4C-205ENST00000443289 COL4A3BPQ9Y5P4 624 aa18.2■□□□□ 0.5
ATG4C-205ENST00000443289 XIRP2A4UGR9 3374 aa18.19■□□□□ 0.5
ATG4C-205ENST00000443289 WNT7AO00755 349 aa18.19■□□□□ 0.5
ATG4C-205ENST00000443289 ASAP2O43150 1006 aa18.19■□□□□ 0.5
ATG4C-205ENST00000443289 ATP2B1P20020 1258 aa18.19■□□□□ 0.5
ATG4C-205ENST00000443289 COL19A1Q14993 1142 aa18.19■□□□□ 0.5
ATG4C-205ENST00000443289 PUS10Q3MIT2 529 aaKnown RBP18.19■□□□□ 0.5
ATG4C-205ENST00000443289 KSR1Q8IVT5 923 aa18.19■□□□□ 0.5
ATG4C-205ENST00000443289 ABI1Q8IZP0 508 aa18.19■□□□□ 0.5
ATG4C-205ENST00000443289 POF1BQ8WVV4 589 aa18.19■□□□□ 0.5
ATG4C-205ENST00000443289 PRPF31Q8WWY3 499 aaKnown RBP18.19■□□□□ 0.5
ATG4C-205ENST00000443289 PPP2R3CQ969Q6 453 aa18.19■□□□□ 0.5
ATG4C-205ENST00000443289 TMEM143Q96AN5 459 aa18.19■□□□□ 0.5
ATG4C-205ENST00000443289 INTS4Q96HW7 963 aaKnown RBP18.19■□□□□ 0.5
ATG4C-205ENST00000443289 CASD1Q96PB1 797 aa18.19■□□□□ 0.5
ATG4C-205ENST00000443289 TRAIPQ9BWF2 469 aa18.19■□□□□ 0.5
ATG4C-205ENST00000443289 VPS37CA5D8V6 355 aaPredicted RBP18.18■□□□□ 0.5
ATG4C-205ENST00000443289 SKIP12755 728 aa18.18■□□□□ 0.5
ATG4C-205ENST00000443289 LAG3P18627 525 aa18.18■□□□□ 0.5
ATG4C-205ENST00000443289 MCM7P33993 719 aa18.18■□□□□ 0.5
ATG4C-205ENST00000443289 UBE3AQ05086 875 aa18.18■□□□□ 0.5
ATG4C-205ENST00000443289 ORC2Q13416 577 aaPredicted RBP18.18■□□□□ 0.5
ATG4C-205ENST00000443289 CAMK1Q14012 370 aa18.18■□□□□ 0.5
ATG4C-205ENST00000443289 CATSPER4Q7RTX7 472 aa18.18■□□□□ 0.5
ATG4C-205ENST00000443289 SRGAP1Q7Z6B7 1085 aa18.18■□□□□ 0.5
ATG4C-205ENST00000443289 ZNF598Q86UK7 904 aaKnown RBP18.18■□□□□ 0.5
ATG4C-205ENST00000443289 RNF169Q8NCN4 708 aa18.18■□□□□ 0.5
ATG4C-205ENST00000443289 TMEM60Q9H2L4 133 aa18.18■□□□□ 0.5
ATG4C-205ENST00000443289 CWH43Q9H720 699 aa18.18■□□□□ 0.5
ATG4C-205ENST00000443289 IFT122Q9HBG6 1241 aa18.18■□□□□ 0.5
ATG4C-205ENST00000443289 ANKEF1Q9NU02 776 aa18.18■□□□□ 0.5
ATG4C-205ENST00000443289 RNF19AQ9NV58 838 aa18.18■□□□□ 0.5
ATG4C-205ENST00000443289 BRWD1Q9NSI6 2320 aa18.18■□□□□ 0.5
ATG4C-205ENST00000443289 NCOR1O75376 2440 aa18.17■□□□□ 0.5
ATG4C-205ENST00000443289 ZBTB39O15060 712 aa18.17■□□□□ 0.5
ATG4C-205ENST00000443289 XRCC6P12956 609 aaKnown RBP eCLIP18.17■□□□□ 0.5
ATG4C-205ENST00000443289 DNAJB1P25685 340 aa18.17■□□□□ 0.5
ATG4C-205ENST00000443289 LAMTOR4Q0VGL1 99 aa18.17■□□□□ 0.5
ATG4C-205ENST00000443289 HYAL1Q12794 435 aa18.17■□□□□ 0.5
ATG4C-205ENST00000443289 EMC2Q15006 297 aa18.17■□□□□ 0.5
ATG4C-205ENST00000443289 TWF2Q6IBS0 349 aaKnown RBP18.17■□□□□ 0.5
ATG4C-205ENST00000443289 EP400NLQ6ZTU2 488 aa18.17■□□□□ 0.5
ATG4C-205ENST00000443289 NOSTRINQ8IVI9 506 aa18.17■□□□□ 0.5
ATG4C-205ENST00000443289 THNSL1Q8IYQ7 743 aa18.17■□□□□ 0.5
ATG4C-205ENST00000443289 COLGALT1Q8NBJ5 622 aa18.17■□□□□ 0.5
ATG4C-205ENST00000443289 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.17■□□□□ 0.5
ATG4C-205ENST00000443289 RSPH1Q8WYR4 309 aa18.17■□□□□ 0.5
ATG4C-205ENST00000443289 NECAB3Q96P71 396 aaPredicted RBP18.17■□□□□ 0.5
ATG4C-205ENST00000443289 MTRQ99707 1265 aa18.17■□□□□ 0.5
ATG4C-205ENST00000443289 CLDND1Q9NY35 253 aa18.17■□□□□ 0.5
ATG4C-205ENST00000443289 PIN4Q9Y237 131 aaKnown RBP18.17■□□□□ 0.5
ATG4C-205ENST00000443289 TCF20Q9UGU0 1960 aaKnown RBP18.17■□□□□ 0.5
ATG4C-205ENST00000443289 MYO7AQ13402 2215 aa18.17■□□□□ 0.5
ATG4C-205ENST00000443289 FNDC1Q4ZHG4 1894 aaPredicted RBP18.16■□□□□ 0.5
ATG4C-205ENST00000443289 DGAT1O75907 488 aa18.16■□□□□ 0.5
ATG4C-205ENST00000443289 FGF18O76093 207 aa18.16■□□□□ 0.5
ATG4C-205ENST00000443289 SRGAP2CP0DJJ0 459 aa18.16■□□□□ 0.5
ATG4C-205ENST00000443289 PHKA2P46019 1235 aa18.16■□□□□ 0.5
ATG4C-205ENST00000443289 TRAPPC10P48553 1259 aa18.16■□□□□ 0.5
ATG4C-205ENST00000443289 MXD4Q14582 209 aaPredicted RBP18.16■□□□□ 0.5
ATG4C-205ENST00000443289 CTC1Q2NKJ3 1217 aa18.16■□□□□ 0.5
ATG4C-205ENST00000443289 LRRC55Q6ZSA7 311 aa18.16■□□□□ 0.5
ATG4C-205ENST00000443289 FERMT3Q86UX7 667 aa18.16■□□□□ 0.5
ATG4C-205ENST00000443289 LRRC43Q8N309 656 aa18.16■□□□□ 0.5
ATG4C-205ENST00000443289 CCDC43Q96MW1 224 aaKnown RBP18.16■□□□□ 0.5
ATG4C-205ENST00000443289 H3BQ06 376 aaPredicted RBP18.15■□□□□ 0.5
ATG4C-205ENST00000443289 CSPG5O95196 566 aa18.15■□□□□ 0.5
ATG4C-205ENST00000443289 ATF7P17544 494 aaPredicted RBP18.15■□□□□ 0.5
ATG4C-205ENST00000443289 RAB27AP51159 221 aa18.15■□□□□ 0.5
ATG4C-205ENST00000443289 NBR1Q14596 966 aa18.15■□□□□ 0.5
ATG4C-205ENST00000443289 ZNF174Q15697 407 aa18.15■□□□□ 0.5
ATG4C-205ENST00000443289 CLLU1OSQ5K130 101 aa18.15■□□□□ 0.5
ATG4C-205ENST00000443289 PTCRAQ6ISU1 281 aaPredicted RBP18.15■□□□□ 0.5
ATG4C-205ENST00000443289 PDE12Q6L8Q7 609 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms