RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 TBCKQ8TEA7 893 aa15.53■□□□□ 0.08
PTPRE-203ENST00000442830 ZNF274Q96GC6 653 aaPredicted RBP15.53■□□□□ 0.08
PTPRE-203ENST00000442830 NAP1L4Q99733 375 aaKnown RBP15.53■□□□□ 0.08
PTPRE-203ENST00000442830 IRF2BPLQ9H1B7 796 aa15.53■□□□□ 0.08
PTPRE-203ENST00000442830 UNC45AQ9H3U1 944 aa15.53■□□□□ 0.08
PTPRE-203ENST00000442830 ZDBF2Q9HCK1 2354 aa15.52■□□□□ 0.08
PTPRE-203ENST00000442830 TMEM221A6NGB7 291 aa15.52■□□□□ 0.08
PTPRE-203ENST00000442830 M0R296 226 aa15.52■□□□□ 0.08
PTPRE-203ENST00000442830 PER2O15055 1255 aa15.52■□□□□ 0.08
PTPRE-203ENST00000442830 CHMP2AO43633 222 aa15.52■□□□□ 0.08
PTPRE-203ENST00000442830 CDKL5O76039 1030 aa15.52■□□□□ 0.08
PTPRE-203ENST00000442830 XBP1P17861 261 aa15.52■□□□□ 0.08
PTPRE-203ENST00000442830 TECP42680 631 aa15.52■□□□□ 0.08
PTPRE-203ENST00000442830 NHLH1Q02575 133 aa15.52■□□□□ 0.08
PTPRE-203ENST00000442830 ITIH3Q06033 890 aa15.52■□□□□ 0.08
PTPRE-203ENST00000442830 SIGLEC14Q08ET2 396 aa15.52■□□□□ 0.08
PTPRE-203ENST00000442830 KCNC3Q14003 757 aa15.52■□□□□ 0.08
PTPRE-203ENST00000442830 CES5AQ6NT32 575 aa15.52■□□□□ 0.08
PTPRE-203ENST00000442830 BLIDQ8IZY5 108 aa15.52■□□□□ 0.08
PTPRE-203ENST00000442830 TMEM169Q96HH4 297 aa15.52■□□□□ 0.08
PTPRE-203ENST00000442830 FBXL18Q96ME1 805 aa15.52■□□□□ 0.08
PTPRE-203ENST00000442830 SEPT9Q9UHD8 586 aaPredicted RBP15.52■□□□□ 0.08
PTPRE-203ENST00000442830 CYP46A1Q9Y6A2 500 aa15.52■□□□□ 0.08
PTPRE-203ENST00000442830 GAS2O43903 313 aaKnown RBP15.51■□□□□ 0.07
PTPRE-203ENST00000442830 GCFC2P16383 781 aaKnown RBP15.51■□□□□ 0.07
PTPRE-203ENST00000442830 NUBP1P53384 320 aa15.51■□□□□ 0.07
PTPRE-203ENST00000442830 POLGP54098 1239 aaPredicted RBP15.51■□□□□ 0.07
PTPRE-203ENST00000442830 PTPN5P54829 565 aa15.51■□□□□ 0.07
PTPRE-203ENST00000442830 CCT2P78371 535 aaKnown RBP15.51■□□□□ 0.07
PTPRE-203ENST00000442830 NONOQ15233 471 aaKnown RBP eCLIP15.51■□□□□ 0.07
PTPRE-203ENST00000442830 KRT25Q7Z3Z0 450 aa15.51■□□□□ 0.07
PTPRE-203ENST00000442830 ZNF598Q86UK7 904 aaKnown RBP15.51■□□□□ 0.07
PTPRE-203ENST00000442830 SLC39A11Q8N1S5 342 aa15.51■□□□□ 0.07
PTPRE-203ENST00000442830 TMEM87AQ8NBN3 555 aa15.51■□□□□ 0.07
PTPRE-203ENST00000442830 RNF169Q8NCN4 708 aa15.51■□□□□ 0.07
PTPRE-203ENST00000442830 PBXIP1Q96AQ6 731 aa15.51■□□□□ 0.07
PTPRE-203ENST00000442830 TM6SF1Q9BZW5 370 aa15.51■□□□□ 0.07
PTPRE-203ENST00000442830 RNF19AQ9NV58 838 aa15.51■□□□□ 0.07
PTPRE-203ENST00000442830 DZANK1Q9NVP4 752 aa15.51■□□□□ 0.07
PTPRE-203ENST00000442830 IGKV6-21A0A0C4DH24 114 aa15.5■□□□□ 0.07
PTPRE-203ENST00000442830 PSMC5P62195 406 aa15.5■□□□□ 0.07
PTPRE-203ENST00000442830 UGCGQ16739 394 aa15.5■□□□□ 0.07
PTPRE-203ENST00000442830 MTERF2Q49AM1 385 aa15.5■□□□□ 0.07
PTPRE-203ENST00000442830 CLLU1OSQ5K130 101 aa15.5■□□□□ 0.07
PTPRE-203ENST00000442830 TWF2Q6IBS0 349 aaKnown RBP15.5■□□□□ 0.07
PTPRE-203ENST00000442830 GLB1LQ6UWU2 654 aa15.5■□□□□ 0.07
PTPRE-203ENST00000442830 LRRC55Q6ZSA7 311 aa15.5■□□□□ 0.07
PTPRE-203ENST00000442830 MRPL43Q8N983 215 aaKnown RBP15.5■□□□□ 0.07
PTPRE-203ENST00000442830 PGBD4Q96DM1 585 aa15.5■□□□□ 0.07
PTPRE-203ENST00000442830 RPGRIP1Q96KN7 1286 aa15.5■□□□□ 0.07
PTPRE-203ENST00000442830 RIPOR3Q96MK2 946 aa15.5■□□□□ 0.07
PTPRE-203ENST00000442830 FAM20AQ96MK3 541 aa15.5■□□□□ 0.07
PTPRE-203ENST00000442830 MBOAT7Q96N66 472 aa15.5■□□□□ 0.07
PTPRE-203ENST00000442830 S1PR5Q9H228 398 aa15.5■□□□□ 0.07
PTPRE-203ENST00000442830 ZSWIM6Q9HCJ5 1215 aa15.5■□□□□ 0.07
PTPRE-203ENST00000442830 PCDHGC5Q9Y5F6 944 aa15.5■□□□□ 0.07
PTPRE-203ENST00000442830 WDFY4Q6ZS81 3184 aa15.49■□□□□ 0.07
PTPRE-203ENST00000442830 ADAMTS3O15072 1205 aa15.49■□□□□ 0.07
PTPRE-203ENST00000442830 MAFO75444 373 aaPredicted RBP15.49■□□□□ 0.07
PTPRE-203ENST00000442830 MTHFRP42898 656 aa15.49■□□□□ 0.07
PTPRE-203ENST00000442830 PHKA2P46019 1235 aa15.49■□□□□ 0.07
PTPRE-203ENST00000442830 MRE11P49959 708 aa15.49■□□□□ 0.07
PTPRE-203ENST00000442830 PTPN21Q16825 1174 aa15.49■□□□□ 0.07
PTPRE-203ENST00000442830 B3GNT9Q6UX72 402 aa15.49■□□□□ 0.07
PTPRE-203ENST00000442830 ALYREFQ86V81 257 aaKnown RBP15.49■□□□□ 0.07
PTPRE-203ENST00000442830 PPFIBP1Q86W92 1011 aa15.49■□□□□ 0.07
PTPRE-203ENST00000442830 FBXL6Q8N531 539 aa15.49■□□□□ 0.07
PTPRE-203ENST00000442830 VN1R2Q8NFZ6 395 aa15.49■□□□□ 0.07
PTPRE-203ENST00000442830 ETNPPLQ8TBG4 499 aa15.49■□□□□ 0.07
PTPRE-203ENST00000442830 HELQQ8TDG4 1101 aa15.49■□□□□ 0.07
PTPRE-203ENST00000442830 SLC7A3Q8WY07 619 aa15.49■□□□□ 0.07
PTPRE-203ENST00000442830 NCOA5Q9HCD5 579 aaKnown RBP15.49■□□□□ 0.07
PTPRE-203ENST00000442830 HCSTQ9UBK5 93 aa15.49■□□□□ 0.07
PTPRE-203ENST00000442830 DDX25Q9UHL0 483 aaKnown RBP15.49■□□□□ 0.07
PTPRE-203ENST00000442830 IRAK3Q9Y616 596 aa15.49■□□□□ 0.07
PTPRE-203ENST00000442830 KMT2EQ8IZD2 1858 aa15.48■□□□□ 0.07
PTPRE-203ENST00000442830 C2orf71A6NGG8 1288 aa15.48■□□□□ 0.07
PTPRE-203ENST00000442830 M0R2N6 131 aa15.48■□□□□ 0.07
PTPRE-203ENST00000442830 TBX3O15119 743 aa15.48■□□□□ 0.07
PTPRE-203ENST00000442830 ZNF623O75123 536 aa15.48■□□□□ 0.07
PTPRE-203ENST00000442830 QARSP47897 775 aaKnown RBP15.48■□□□□ 0.07
PTPRE-203ENST00000442830 BCAR1P56945 870 aa15.48■□□□□ 0.07
PTPRE-203ENST00000442830 PPP2R5CQ13362 524 aa15.48■□□□□ 0.07
PTPRE-203ENST00000442830 PCBP1Q15365 356 aaKnown RBP eCLIP15.48■□□□□ 0.07
PTPRE-203ENST00000442830 SYCE2Q6PIF2 218 aa15.48■□□□□ 0.07
PTPRE-203ENST00000442830 ZBTB33Q86T24 672 aa15.48■□□□□ 0.07
PTPRE-203ENST00000442830 UBALD2Q8IYN6 164 aa15.48■□□□□ 0.07
PTPRE-203ENST00000442830 ADAM7Q9H2U9 754 aa15.48■□□□□ 0.07
PTPRE-203ENST00000442830 SUCLA2Q9P2R7 463 aaPredicted RBP15.48■□□□□ 0.07
PTPRE-203ENST00000442830 PIN4Q9Y237 131 aaKnown RBP15.48■□□□□ 0.07
PTPRE-203ENST00000442830 CNTNAP2Q9UHC6 1331 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 A0A087WZ62 844 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 CCDC194A0A1B0GVG4 234 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 DDX11L8A8MPP1 907 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 HIDE1A8MVS5 230 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 EDIL3O43854 480 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 TDP2O95551 362 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 P4HBP07237 508 aaKnown RBP15.47■□□□□ 0.07
PTPRE-203ENST00000442830 RFC5P40937 340 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 RNASELQ05823 741 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms