RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 DISC1Q9NRI5 854 aa13.44□□□□□ -0.26
TNXB-202ENST00000442721 IRAK3Q9Y616 596 aa13.44□□□□□ -0.26
TNXB-202ENST00000442721 DENND4AQ7Z401 1863 aa13.44□□□□□ -0.26
TNXB-202ENST00000442721 CCDC196A0A1B0GTZ2 297 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 NT5C1B-RDH14C9J2C7 533 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 MSH4O15457 936 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 PRPF3O43395 683 aaKnown RBP13.43□□□□□ -0.26
TNXB-202ENST00000442721 DMDP11532 3685 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 FGFR4P22455 802 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 GNA11P29992 359 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 METAP2P50579 478 aaKnown RBP eCLIP13.43□□□□□ -0.26
TNXB-202ENST00000442721 KRT32Q14532 448 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 BMP2KLQ5H9B9 411 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 RIF1Q5UIP0 2472 aaKnown RBP13.43□□□□□ -0.26
TNXB-202ENST00000442721 KIAA1841Q6NSI8 718 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 TMEM173Q86WV6 379 aaPredicted RBP13.43□□□□□ -0.26
TNXB-202ENST00000442721 ZDHHC14Q8IZN3 488 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 TMEM105Q8N8V8 129 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 CEP89Q96ST8 783 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 RIT2Q99578 217 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 SMOC2Q9H3U7 446 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 CHST12Q9NRB3 414 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 NRBP2Q9NSY0 501 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 DZANK1Q9NVP4 752 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 DACT1Q9NYF0 836 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 SAMM50Q9Y512 469 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 FAM186AA6NE01 2351 aa13.43□□□□□ -0.26
TNXB-202ENST00000442721 IGKV6-21A0A0C4DH24 114 aa13.42□□□□□ -0.26
TNXB-202ENST00000442721 CSDE1O75534 798 aaKnown RBP13.42□□□□□ -0.26
TNXB-202ENST00000442721 CXCL14O95715 111 aa13.42□□□□□ -0.26
TNXB-202ENST00000442721 HMGB1P09429 215 aaKnown RBP13.42□□□□□ -0.26
TNXB-202ENST00000442721 PHKA2P46019 1235 aa13.42□□□□□ -0.26
TNXB-202ENST00000442721 ALDH7A1P49419 539 aaKnown RBP13.42□□□□□ -0.26
TNXB-202ENST00000442721 POLGP54098 1239 aaPredicted RBP13.42□□□□□ -0.26
TNXB-202ENST00000442721 TBC1D8BQ0IIM8 1120 aa13.42□□□□□ -0.26
TNXB-202ENST00000442721 DRP2Q13474 957 aa13.42□□□□□ -0.26
TNXB-202ENST00000442721 RARS2Q5T160 578 aaKnown RBP13.42□□□□□ -0.26
TNXB-202ENST00000442721 VPS52Q8N1B4 723 aa13.42□□□□□ -0.26
TNXB-202ENST00000442721 TDRD5Q8NAT2 981 aaKnown RBP13.42□□□□□ -0.26
TNXB-202ENST00000442721 SLC22A17Q8WUG5 538 aa13.42□□□□□ -0.26
TNXB-202ENST00000442721 NLRP7Q8WX94 980 aa13.42□□□□□ -0.26
TNXB-202ENST00000442721 SLC5A5Q92911 643 aa13.42□□□□□ -0.26
TNXB-202ENST00000442721 TMEM169Q96HH4 297 aa13.42□□□□□ -0.26
TNXB-202ENST00000442721 UNC45AQ9H3U1 944 aa13.42□□□□□ -0.26
TNXB-202ENST00000442721 USTQ9Y2C2 406 aa13.42□□□□□ -0.26
TNXB-202ENST00000442721 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.41□□□□□ -0.26
TNXB-202ENST00000442721 CARNS1A5YM72 827 aa13.41□□□□□ -0.26
TNXB-202ENST00000442721 STBD1O95210 358 aa13.41□□□□□ -0.26
TNXB-202ENST00000442721 ASGR2P07307 311 aa13.41□□□□□ -0.26
TNXB-202ENST00000442721 WEE2P0C1S8 567 aa13.41□□□□□ -0.26
TNXB-202ENST00000442721 CTSAP10619 480 aa13.41□□□□□ -0.26
TNXB-202ENST00000442721 EPCAMP16422 314 aa13.41□□□□□ -0.26
TNXB-202ENST00000442721 SFNP31947 248 aa13.41□□□□□ -0.26
TNXB-202ENST00000442721 NBL1P41271 181 aa13.41□□□□□ -0.26
TNXB-202ENST00000442721 JAK3P52333 1124 aa13.41□□□□□ -0.26
TNXB-202ENST00000442721 BMS1Q14692 1282 aaKnown RBP13.41□□□□□ -0.26
TNXB-202ENST00000442721 KANK3Q6NY19 840 aa13.41□□□□□ -0.26
TNXB-202ENST00000442721 B3GNT9Q6UX72 402 aa13.41□□□□□ -0.26
TNXB-202ENST00000442721 ASCL5Q7RTU5 278 aa13.41□□□□□ -0.26
TNXB-202ENST00000442721 DDX53Q86TM3 631 aaKnown RBP13.41□□□□□ -0.26
TNXB-202ENST00000442721 C12orf76Q8N812 135 aaPredicted RBP13.41□□□□□ -0.26
TNXB-202ENST00000442721 BICD2Q8TD16 824 aa13.41□□□□□ -0.26
TNXB-202ENST00000442721 BCL7CQ8WUZ0 217 aaPredicted RBP13.41□□□□□ -0.26
TNXB-202ENST00000442721 AUTS2Q8WXX7 1259 aa13.41□□□□□ -0.26
TNXB-202ENST00000442721 KCNB2Q92953 911 aa13.41□□□□□ -0.26
TNXB-202ENST00000442721 IGSF21Q96ID5 467 aa13.41□□□□□ -0.26
TNXB-202ENST00000442721 SCLT1Q96NL6 688 aa13.41□□□□□ -0.26
TNXB-202ENST00000442721 NIFKQ9BYG3 293 aaKnown RBP13.41□□□□□ -0.26
TNXB-202ENST00000442721 GCOM2Q9BZD3 368 aaPredicted RBP13.41□□□□□ -0.26
TNXB-202ENST00000442721 NAP1L2Q9ULW6 460 aaPredicted RBP13.41□□□□□ -0.26
TNXB-202ENST00000442721 VPS13AQ96RL7 3174 aa13.41□□□□□ -0.26
TNXB-202ENST00000442721 GAS7O60861 476 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 ZC3H11AO75152 810 aaKnown RBP eCLIP13.4□□□□□ -0.267e-6■■□□□ 13.7
TNXB-202ENST00000442721 PSMD10O75832 226 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 GALTP07902 379 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 CPA1P15085 419 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 USP11P51784 963 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 CDC42EP1Q00587 391 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 GIT2Q14161 759 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 NTRK3Q16288 839 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 XKR3Q5GH77 459 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 ATAT1Q5SQI0 421 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 ASTLQ6HA08 431 aaPredicted RBP13.4□□□□□ -0.26
TNXB-202ENST00000442721 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 FBXL16Q8N461 479 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 CCDC148Q8NFR7 591 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 RDM1Q8NG50 284 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 FEZF2Q8TBJ5 459 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 PHKBQ93100 1093 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 CCDC136Q96JN2 1154 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 VN1R3Q9BXE9 311 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 TEKT3Q9BXF9 490 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 RNF26Q9BY78 433 aaPredicted RBP13.4□□□□□ -0.26
TNXB-202ENST00000442721 NRDE2Q9H7Z3 1164 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 TBC1D13Q9NVG8 400 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 SPTBN4Q9H254 2564 aa13.4□□□□□ -0.26
TNXB-202ENST00000442721 A0A087WZ62 844 aa13.39□□□□□ -0.27
TNXB-202ENST00000442721 PRR23AA6NEV1 266 aa13.39□□□□□ -0.27
TNXB-202ENST00000442721 MEIS3P2A8K0S8 358 aa13.39□□□□□ -0.27
TNXB-202ENST00000442721 CHMP2AO43633 222 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms