RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 ERVK-5Q9HDB9 667 aa13.68□□□□□ -0.22
USP1-203ENST00000442679 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.67□□□□□ -0.22
USP1-203ENST00000442679 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.67□□□□□ -0.22
USP1-203ENST00000442679 ENPP3O14638 875 aa13.67□□□□□ -0.22
USP1-203ENST00000442679 ATP2A2P16615 1042 aaKnown RBP13.67□□□□□ -0.22
USP1-203ENST00000442679 FGFR4P22455 802 aa13.67□□□□□ -0.22
USP1-203ENST00000442679 GLRA2P23416 452 aa13.67□□□□□ -0.22
USP1-203ENST00000442679 PHKA2P46019 1235 aa13.67□□□□□ -0.22
USP1-203ENST00000442679 SLC12A3P55017 1021 aa13.67□□□□□ -0.22
USP1-203ENST00000442679 DHX8Q14562 1220 aaKnown RBP13.67□□□□□ -0.22
USP1-203ENST00000442679 MCM6Q14566 821 aa13.67□□□□□ -0.22
USP1-203ENST00000442679 SHC4Q6S5L8 630 aa13.67□□□□□ -0.22
USP1-203ENST00000442679 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.67□□□□□ -0.22
USP1-203ENST00000442679 CCDC73Q6ZRK6 1079 aa13.67□□□□□ -0.22
USP1-203ENST00000442679 PHOSPHO2Q8TCD6 241 aa13.67□□□□□ -0.22
USP1-203ENST00000442679 FTHL17Q9BXU8 183 aa13.67□□□□□ -0.22
USP1-203ENST00000442679 SCAND2PQ9GZW5 306 aaPredicted RBP13.67□□□□□ -0.22
USP1-203ENST00000442679 TMX1Q9H3N1 280 aa13.67□□□□□ -0.22
USP1-203ENST00000442679 IFT122Q9HBG6 1241 aa13.67□□□□□ -0.22
USP1-203ENST00000442679 BLOC1S4Q9NUP1 217 aa13.67□□□□□ -0.22
USP1-203ENST00000442679 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.66□□□□□ -0.22
USP1-203ENST00000442679 GRXCR1A8MXD5 290 aa13.66□□□□□ -0.22
USP1-203ENST00000442679 AMHP03971 560 aa13.66□□□□□ -0.22
USP1-203ENST00000442679 DEFB103AP81534 67 aa13.66□□□□□ -0.22
USP1-203ENST00000442679 POU5F1BQ06416 359 aa13.66□□□□□ -0.22
USP1-203ENST00000442679 CAPSQ13938 189 aa13.66□□□□□ -0.22
USP1-203ENST00000442679 ARSHQ5FYA8 562 aa13.66□□□□□ -0.22
USP1-203ENST00000442679 FAM109BQ6ICB4 259 aaPredicted RBP13.66□□□□□ -0.22
USP1-203ENST00000442679 FAM43BQ6ZT52 329 aaPredicted RBP13.66□□□□□ -0.22
USP1-203ENST00000442679 SRGAP1Q7Z6B7 1085 aa13.66□□□□□ -0.22
USP1-203ENST00000442679 RTN4RL1Q86UN2 441 aaPredicted RBP13.66□□□□□ -0.22
USP1-203ENST00000442679 GPBP1Q86WP2 473 aa13.66□□□□□ -0.22
USP1-203ENST00000442679 PDILTQ8N807 584 aa13.66□□□□□ -0.22
USP1-203ENST00000442679 LARP4BQ92615 738 aaKnown RBP13.66□□□□□ -0.22
USP1-203ENST00000442679 KIFAP3Q92845 792 aa13.66□□□□□ -0.22
USP1-203ENST00000442679 SLC9A7Q96T83 725 aa13.66□□□□□ -0.22
USP1-203ENST00000442679 TIPINQ9BVW5 301 aa13.66□□□□□ -0.22
USP1-203ENST00000442679 KCND2Q9NZV8 630 aa13.66□□□□□ -0.22
USP1-203ENST00000442679 EVPLQ92817 2033 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 A0A087X0B3 334 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 NPHP3-ACAD11A0A0J9YXS1 232 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 DENND3A2RUS2 1198 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 LRRIQ4A6NIV6 560 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 HIP1RO75146 1068 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 SFPQP23246 707 aaKnown RBP eCLIP13.65□□□□□ -0.22
USP1-203ENST00000442679 GUCY2CP25092 1073 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 STAT6P42226 847 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 PTENP60484 403 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 SMAD3P84022 425 aaKnown RBP13.65□□□□□ -0.22
USP1-203ENST00000442679 RAD51AP2Q09MP3 1159 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 PPP2R5AQ15172 486 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 RESP18Q5W5W9 173 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 CATSPER4Q7RTX7 472 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 TMCO2Q7Z6W1 182 aaPredicted RBP13.65□□□□□ -0.22
USP1-203ENST00000442679 HERC6Q8IVU3 1022 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 MYOCDQ8IZQ8 938 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 BSNDQ8WZ55 320 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 IFT74Q96LB3 600 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 DRC1Q96MC2 740 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 TSPYL2Q9H2G4 693 aaPredicted RBP13.65□□□□□ -0.22
USP1-203ENST00000442679 MINDY3Q9H8M7 445 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 FAM13BQ9NYF5 915 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 CHMP5Q9NZZ3 219 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 STK17AQ9UEE5 414 aa13.65□□□□□ -0.22
USP1-203ENST00000442679 MYH15Q9Y2K3 1946 aa13.64□□□□□ -0.23
USP1-203ENST00000442679 SFI1A8K8P3 1242 aa13.64□□□□□ -0.23
USP1-203ENST00000442679 INO80B-WBP1J3KQ70 363 aa13.64□□□□□ -0.23
USP1-203ENST00000442679 SOX1O00570 391 aaPredicted RBP13.64□□□□□ -0.23
USP1-203ENST00000442679 MGEA5O60502 916 aa13.64□□□□□ -0.23
USP1-203ENST00000442679 KRT18P05783 430 aaKnown RBP13.64□□□□□ -0.23
USP1-203ENST00000442679 ZSCAN20P17040 1043 aaPredicted RBP13.64□□□□□ -0.23
USP1-203ENST00000442679 NAMPTP43490 491 aa13.64□□□□□ -0.23
USP1-203ENST00000442679 RABGGTBP53611 331 aa13.64□□□□□ -0.23
USP1-203ENST00000442679 DSC3Q14574 896 aa13.64□□□□□ -0.23
USP1-203ENST00000442679 NAALADL2Q58DX5 795 aa13.64□□□□□ -0.23
USP1-203ENST00000442679 ADALQ6DHV7 355 aa13.64□□□□□ -0.23
USP1-203ENST00000442679 FAM117BQ6P1L5 589 aa13.64□□□□□ -0.23
USP1-203ENST00000442679 SV2BQ7L1I2 683 aa13.64□□□□□ -0.23
USP1-203ENST00000442679 IFNLR1Q8IU57 520 aaPredicted RBP13.64□□□□□ -0.23
USP1-203ENST00000442679 DAW1Q8N136 415 aa13.64□□□□□ -0.23
USP1-203ENST00000442679 LINC01599Q8WXQ3 324 aa13.64□□□□□ -0.23
USP1-203ENST00000442679 ADAM2Q99965 735 aa13.64□□□□□ -0.23
USP1-203ENST00000442679 ZBED2Q9BTP6 218 aa13.64□□□□□ -0.23
USP1-203ENST00000442679 NFKBIZQ9BYH8 718 aa13.64□□□□□ -0.23
USP1-203ENST00000442679 GDPD2Q9HCC8 539 aa13.64□□□□□ -0.23
USP1-203ENST00000442679 RGS18Q9NS28 235 aa13.64□□□□□ -0.23
USP1-203ENST00000442679 ARID2Q68CP9 1835 aa13.64□□□□□ -0.23
USP1-203ENST00000442679 TET1Q8NFU7 2136 aa13.63□□□□□ -0.23
USP1-203ENST00000442679 SIP14410 1827 aa13.63□□□□□ -0.23
USP1-203ENST00000442679 UPP2O95045 317 aa13.63□□□□□ -0.23
USP1-203ENST00000442679 CMA1P23946 247 aa13.63□□□□□ -0.23
USP1-203ENST00000442679 PBX2P40425 430 aa13.63□□□□□ -0.23
USP1-203ENST00000442679 PEX3P56589 373 aa13.63□□□□□ -0.23
USP1-203ENST00000442679 MBTD1Q05BQ5 628 aa13.63□□□□□ -0.23
USP1-203ENST00000442679 MAPK7Q13164 816 aa13.63□□□□□ -0.23
USP1-203ENST00000442679 TPRNQ4KMQ1 711 aa13.63□□□□□ -0.23
USP1-203ENST00000442679 ZBTB8OSQ8IWT0 167 aa13.63□□□□□ -0.23
USP1-203ENST00000442679 IQUBQ8NA54 791 aa13.63□□□□□ -0.23
USP1-203ENST00000442679 DEPTORQ8TB45 409 aa13.63□□□□□ -0.23
USP1-203ENST00000442679 TOP1MTQ969P6 601 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms