RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 FBXL16Q8N461 479 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 MRPL43Q8N983 215 aaKnown RBP9.41□□□□□ -0.9
TOP3B-209ENST00000442653 HELQQ8TDG4 1101 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 CCDC136Q96JN2 1154 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 SCLT1Q96NL6 688 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 CEP89Q96ST8 783 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 RIT2Q99578 217 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 SH2D3AQ9BRG2 576 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 SLC26A6Q9BXS9 759 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 RNF26Q9BY78 433 aaPredicted RBP9.41□□□□□ -0.9
TOP3B-209ENST00000442653 AGXT2Q9BYV1 514 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 UNC45AQ9H3U1 944 aa9.41□□□□□ -0.9
TOP3B-209ENST00000442653 NT5C1B-RDH14C9J2C7 533 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 CLASP2O75122 1294 aaKnown RBP9.4□□□□□ -0.9
TOP3B-209ENST00000442653 PSMD10O75832 226 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 STBD1O95210 358 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 TDP2O95551 362 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 PDGFBP01127 241 aaPredicted RBP9.4□□□□□ -0.9
TOP3B-209ENST00000442653 SRGAP2BP0DMP2 458 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 HOXB8P17481 243 aaPredicted RBP9.4□□□□□ -0.9
TOP3B-209ENST00000442653 USP11P51784 963 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 NUBP1P53384 320 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 PTPN5P54829 565 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 BCAR1P56945 870 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 CCT2P78371 535 aaKnown RBP9.4□□□□□ -0.9
TOP3B-209ENST00000442653 KRT17Q04695 432 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 LRCH2Q5VUJ6 765 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 BLOC1S2Q6QNY1 142 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 B3GNT9Q6UX72 402 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 CENPQQ7L2Z9 268 aaPredicted RBP9.4□□□□□ -0.9
TOP3B-209ENST00000442653 CCDC148Q8NFR7 591 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 FEZF2Q8TBJ5 459 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 BICD2Q8TD16 824 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 NLRP7Q8WX94 980 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 LPPQ93052 612 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 SMOC2Q9H3U7 446 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 TSHZ2Q9NRE2 1034 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 NRBP2Q9NSY0 501 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 SEPT9Q9UHD8 586 aaPredicted RBP9.4□□□□□ -0.9
TOP3B-209ENST00000442653 FARP1Q9Y4F1 1045 aaPredicted RBP9.4□□□□□ -0.9
TOP3B-209ENST00000442653 ZNF292O60281 2723 aa9.4□□□□□ -0.9
TOP3B-209ENST00000442653 DCHS1Q96JQ0 3298 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 DMXL1Q9Y485 3027 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 IGKV6-21A0A0C4DH24 114 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 MEIS3P2A8K0S8 358 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 B4GALT3O60512 393 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 EOMESO95936 686 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 WEE2P0C1S8 567 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 IFNAR1P17181 557 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 PDIA3P30101 505 aaKnown RBP9.39□□□□□ -0.91
TOP3B-209ENST00000442653 SFNP31947 248 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 PHKA2P46019 1235 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 JAK3P52333 1124 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 EVCP57679 992 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 AKAP17AQ02040 695 aaKnown RBP9.39□□□□□ -0.91
TOP3B-209ENST00000442653 SMC1AQ14683 1233 aaKnown RBP9.39□□□□□ -0.91
TOP3B-209ENST00000442653 NPY5RQ15761 445 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 LONRF3Q496Y0 759 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 MTERF2Q49AM1 385 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 KANK3Q6NY19 840 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 ZNF710Q8N1W2 664 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 C12orf76Q8N812 135 aaPredicted RBP9.39□□□□□ -0.91
TOP3B-209ENST00000442653 KREMEN2Q8NCW0 462 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 TBCKQ8TEA7 893 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 BCL7CQ8WUZ0 217 aaPredicted RBP9.39□□□□□ -0.91
TOP3B-209ENST00000442653 AUTS2Q8WXX7 1259 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 CASP10Q92851 521 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 TEKT3Q9BXF9 490 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 NIFKQ9BYG3 293 aaKnown RBP9.39□□□□□ -0.91
TOP3B-209ENST00000442653 ADAM7Q9H2U9 754 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 POMKQ9H5K3 350 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 RTN4Q9NQC3 1192 aaKnown RBP9.39□□□□□ -0.91
TOP3B-209ENST00000442653 FAM86C1Q9NVL1 165 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 DACT1Q9NYF0 836 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 PTPRZ1P23471 2315 aaPredicted RBP9.39□□□□□ -0.91
TOP3B-209ENST00000442653 GVINP1Q7Z2Y8 2422 aa9.39□□□□□ -0.91
TOP3B-209ENST00000442653 MYO10Q9HD67 2058 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 CYP3A7-CYP3A51PA0A087WV96 503 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 A0A087WZ62 844 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 C2CD4DB7Z1M9 353 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 M0R2N6 131 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 ZC3H11AO75152 810 aaKnown RBP eCLIP9.38□□□□□ -0.91
TOP3B-209ENST00000442653 BRD1O95696 1058 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 CYP3A7P24462 503 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 AVPR2P30518 371 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 ALDH7A1P49419 539 aaKnown RBP9.38□□□□□ -0.91
TOP3B-209ENST00000442653 NLRP5P59047 1200 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 Q4G0T1 1027 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 XKR3Q5GH77 459 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 TWF2Q6IBS0 349 aaKnown RBP9.38□□□□□ -0.91
TOP3B-209ENST00000442653 ANO5Q75V66 913 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 MIER3Q7Z3K6 550 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 ZBTB33Q86T24 672 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 KSR1Q8IVT5 923 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 VPS52Q8N1B4 723 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 RDM1Q8NG50 284 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 ETNPPLQ8TBG4 499 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 AIFM3Q96NN9 605 aa9.38□□□□□ -0.91
TOP3B-209ENST00000442653 FDXACB1Q9BRP7 624 aaPredicted RBP9.38□□□□□ -0.91
TOP3B-209ENST00000442653 TRAIPQ9BWF2 469 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms